Monocytic leukaemia

CD2_MONOCYTIC_LEUKAEMIA_EXALLC

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

-

2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 C93
  • Hospital discharge: ICD-9 206
  • Hospital discharge: ICD-8 206
  • Cause of death: ICD-10 C93
  • Cause of death: ICD-9 206
  • Cause of death: ICD-8 206

2 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

None

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude
C3_CANCER, C3_CANCER_WIDE

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF8
Parent code in ICD-10
C81-C96
Name in latin
Leuc(h)aemia monocytica

Case counts by codes

FinnGen case counts by registry codes:

No upset plot: script not run.

No upset table: script not run.

Summary Statistics

-FinRegistry-

This endpoint is excluded (different definition than used in FinnGen).

-FinnGen-

Key figures

All Female Male
Number of individuals 111 47 64
Unadjusted period prevalence (%) 0.02 0.02 0.03
Median age at first event (years) 65.71 60.56 69.49

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
101
Matched controls
1011
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
117
Kela drug reimbursment
Leukaemia and other malignant diseases of the blood and bone marrow, and malignant diseases of the lymphatic tissue
396.6
60.3
55
*
C93.1
ICD-10 Finland
Chronic myelomonocytic leukaemia
+∞
46.5
41
*
C93.0
ICD-10 Finland
Acute monoblastic/monocytic leukaemia
+∞
36.7
33
*
XW000
NOMESCO Finland
Bone marrow biopsy
41.3
31.5
39
15
WW500
NOMESCO Finland
Blood transfusion
100.2
27.5
29
*
D46.7
ICD-10 Finland
Other myelodysplastic syndromes
294.0
23.7
23
*
9945/3-C42.1
ICD-O-3
Chronic myelomonocytic leukemia, NOS, of bone marrow
+∞
21.6
20
*
C92.0
ICD-10 Finland
Acute myeloblastic leukaemia [AML]
+∞
21.6
20
*
A04AA01
ATC
ondansetron; systemic, rectal
55.3
19.1
22
5
D64.9
ICD-10 Finland
Anaemia, unspecified
9.7
16.1
35
52
Z51.5
ICD-10 Finland
Palliative care
20.0
14.2
21
13
R50.9
ICD-10 Finland
Fever, unspecified
7.0
13.0
35
71
L03AA02
ATC
filgrastim; parenteral
+∞
12.8
12
*
M04AA01
ATC
allopurinol; systemic
6.3
12.0
35
78
WD105
NOMESCO Finland
Cystostatic therapy of methastized malignancy
134.7
11.7
12
*
C93.9
ICD-10 Finland
Monocytic leukaemia, unspecified
+∞
11.7
11
*
TPH20
NOMESCO Finland
Insertion of central venous catheter through subclavian or brachiocephalic vein
24.8
11.1
15
7
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
6.3
10.9
31
66
B03XA02
ATC
darbepoetin alfa; parenteral
122.2
10.6
11
*
A49.9
ICD-10 Finland
Bacterial infection, unspecified
5.8
10.0
30
68
L01XX05
ATC
hydroxycarbamide; oral
30.5
8.7
11
*
9860/3-C42.1
ICD-O-3
Myeloid leukemia, NOS, of bone marrow
+∞
8.4
8
*
WD125
NOMESCO Finland
Demanding cystostatic therapy of methastized malignancy
+∞
8.4
8
*
9891/3-C42.1
ICD-O-3
Acute monocytic leukemia of bone marrow
+∞
8.4
8
*
JN4BD
NOMESCO Finland
Extensive body CT
10.8
8.1
15
16
PJD41
NOMESCO Finland
Excision of cervical lymph nodes
86.1
7.5
8
*
D46.9
ICD-10 Finland
Myelodysplastic syndrome, unspecified
86.1
7.5
8
*
J05AB11
ATC
valaciclovir; oral
4.9
7.5
25
63
C83.1
ICD-10 Finland
Mantle cell lymphoma
+∞
7.4
7
*
8090/3-C44.9
ICD-O-3
Basal cell carcinoma, NOS, of skin, NOS
+∞
7.4
7
*
A41.9
ICD-10 Finland
Sepsis, unspecified
9.1
6.6
13
16
A03FA01
ATC
metoclopramide; systemic, rectal
5.2
6.5
20
46
127
Kela drug reimbursment
Transplant complication
28.7
6.3
8
*
WW302
NOMESCO Finland
Allogenic transfer of stem cells from relative
+∞
6.3
6
*
9861/3-C42.1
ICD-O-3
Acute myeloid leukemia, NOS, of bone marrow
+∞
6.3
6
*
C83.31
ICD-10 Finland
Diffuse lymphoma with large B cells
+∞
6.3
6
*
J01MA12
ATC
levofloxacin; systemic
3.5
6.3
31
112

Mortality – FinRegistry

This endpoint is excluded (different definition than used in FinnGen).

Relationships between endpoints

Index endpoint: CD2_MONOCYTIC_LEUKAEMIA_EXALLC – Monocytic leukaemia

GWS hits: -

This endpoint is excluded (different definition than used in FinnGen).