Respiratory conditions due to inhalation of chemicals, gases, fumes and vapours

J10_CHEMGASRESP

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 J68
  • Hospital discharge: ICD-9 506
  • Hospital discharge: ICD-8 516[1-2]
  • Cause of death: ICD-10 J68
  • Cause of death: ICD-9 506
  • Cause of death: ICD-8 516[1-2]

2 out of 7 registries used, show all original rules.

316

4. Check minimum number of events

None

316

5. Include endpoints

None

316

6. Filter based on genotype QC (FinnGen only)

316

Control definitions (FinnGen only)

Control exclude
J10_EXTERLUNG

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
J60-J70
Name in latin
Morbositates respiratoriae ex inhalatione chemicalium, gasorum, fumorum et vaporum

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 3900 1869 1984
Only index persons 2958 1403 1555
Unadjusted period prevalence (%)
Whole population 0.05 0.05 0.06
Only index persons 0.06 0.05 0.06
Median age at first event (years)
Whole population 46.70 48.34 45.06
Only index persons 43.67 45.69 41.84

-FinnGen-

Key figures

All Female Male
Number of individuals 316 124 192
Unadjusted period prevalence (%) 0.07 0.04 0.08
Median age at first event (years) 44.73 44.13 45.12

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
284
Matched controls
2838
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
51610
ICD-8 Finland
Other pneumoconiosis and related diseases, Due to inhalation of other dust
+∞
85.9
78
*
J68.0
ICD-10 Finland
Bronchitis and pneumonitis due to chemicals, gases, fumes and vapours
+∞
60.6
56
*
J68.3
ICD-10 Finland
Other acute and subacute respiratory conditions due to chemicals, gases, fumes and vapours
+∞
55.0
51
*
J68.9
ICD-10 Finland
Unspecified respiratory condition due to chemicals, gases, fumes and vapours
+∞
39.5
37
*
51620
ICD-8 Finland
Other pneumoconiosis and related diseases, Due to inhalation of fumes
+∞
26.5
25
*
4950A
ICD-9 Finland
Extrinsic allergic alveolitis, Farmers' lung
+∞
21.1
20
*
J68.2
ICD-10 Finland
Upper respiratory inflammation due to chemicals, gases, fumes and vapours, not elsewhere classified
+∞
14.7
14
*
J68.4
ICD-10 Finland
Chronic respiratory conditions due to chemicals, gases, fumes and vapours
+∞
14.7
14
*
J67.0
ICD-10 Finland
Farmer lung
+∞
13.6
13
*
R03AC02
ATC
salbutamol; inhalant
2.5
12.0
166
1034
R06.0
ICD-10 Finland
Dyspnoea
2.6
10.3
94
459
J45.9
ICD-10 Finland
Asthma, unspecified
2.8
9.6
70
299
J68.1
ICD-10 Finland
Pulmonary oedema due to chemicals, gases, fumes and vapours
+∞
8.4
8
*
203
Kela drug reimbursment
Chronic asthma and similar chronic obstructive pulmonary diseases
2.5
8.2
70
327
R03BA02
ATC
budesonide; inhalant
2.6
7.9
63
280
H02AB06
ATC
prednisolone; systemic
2.0
7.4
139
919
5060A
ICD-9 Finland
Respiratory conditions due to chemical fumes and vapours, Bronchitis and pneumonitis due to fumes and vapours
+∞
7.3
7
*
J45.0
ICD-10 Finland
Predominantly allergic asthma
3.1
7.0
39
139
R03BA05
ATC
fluticasone; inhalant
2.4
6.5
55
255
T59.8
ICD-10 Finland
Toxic effect: Other specified gases, fumes and vapours
+∞
6.3
6
*
5062A
ICD-9 Finland
Respiratory conditions due to chemical fumes and vapours, Upper respiratory inflammation due to fumes and vapours
+∞
6.3
6
*

Mortality – FinRegistry

Association

Association between endpoint J10_CHEMGASRESP and mortality.

Females

Parameter HR [95% CI] p-value
J10_CHEMGASRESP 2.547 [1.64, 3.96] < 0.001
Birth year 0.991 [0.98, 1.0] 0.057

During the follow-up period (1.1.1998 — 31.12.2019), 83 out of 394 females with J10_CHEMGASRESP died.

Males

Parameter HR [95% CI] p-value
J10_CHEMGASRESP 2.008 [1.58, 2.55] < 0.001
Birth year 0.992 [0.98, 1.0] 0.069

During the follow-up period (1.1.1998 — 31.12.2019), 143 out of 908 males with J10_CHEMGASRESP died.

Mortality risk

Mortality risk for people of age

years, who have J10_CHEMGASRESP.

N-year risk Females Males
1 0.175% 0.377%
5 1.164% 2.493%
10 3.067% 6.557%
15 6.139% 12.833%
20 10.725% 21.588%

Relationships between endpoints

Index endpoint: J10_CHEMGASRESP – Respiratory conditions due to inhalation of chemicals, gases, fumes and vapours

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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