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This is a non-core endpoint: only basic statistics are computed.

See these related core endpoints for full statistics:

Other disorders of intestinal carbohydrate absorption

E4_CARBABS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 E74.3
  • Hospital discharge: ICD-9 2713X
  • Cause of death: ICD-10 E74.3
  • Cause of death: ICD-9 2713X

2 out of 7 registries used, show all original rules.

8

4. Check minimum number of events

None

8

5. Include endpoints

None

8

6. Filter based on genotype QC (FinnGen only)

8

Control definitions (FinnGen only)

Control exclude
E4_METABOLIA

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
E74
Name in latin
Aliae perturbationes absorptionis intestinalis carbohydratorum

Case counts by codes

FinnGen case counts by registry codes:

Not enough data for upset plot.

Not enough data for upset table.

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 66 41 25
Only index persons 55 30 25
Unadjusted period prevalence (%)
Whole population 0.00 0.00 0.00
Only index persons 0.00 0.00 0.00
Median age at first event (years)
Whole population - 58.29 26.63
Only index persons 39.41 50.06 26.63

-FinnGen-

Key figures

All Female Male
Number of individuals 8 6 -
Unadjusted period prevalence (%) 0.00 0.00 -
Median age at first event (years) 68.10 77.81 -

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3007853) Bacteria identified in Skin by Aerobe culture
0
10
0.00
0.23
0.0
1.6
—
—
—
0
0
(3000494) Fungus identified in Specimen by Culture
0
10
0.00
0.23
0.0
1.5
—
—
—
0
0
(40758558) Short blood count panel - Blood
0
12
0.00
0.23
0.0
11.6
—
—
—
0
0
(3011397) Hemoglobin [Presence] in Urine by Test strip
0
13
0.00
0.22
0.0
3.9
—
—
—
0
0
(40761536) Microorganisms panel - Urine sediment
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
(3024950) Chlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
(3008152) Bicarbonate [Moles/volume] in Arterial blood
0
5
0.00
0.00
0.0
3.2
—
24.2
—
0
5
(3009343) pH of Capillary blood
0
5
0.00
0.00
0.0
2.6
—
—
—
0
0
(3027946) Carbon dioxide [Partial pressure] in Arterial blood
0
5
0.00
0.00
0.0
2.4
—
4.5
—
0
5
(3018006) Microscopic observation [Identifier] in Cervix by Cyto stain.thin prep
0
9
0.00
0.00
0.0
1.0
—
—
—
0
0
(3027801) Oxygen [Partial pressure] in Arterial blood
0
5
0.00
0.00
0.0
2.4
—
8.7
—
0
5
(3042936) Bacteria identified in Isolate by Culture
0
7
0.00
0.00
0.0
1.9
—
—
—
0
0
(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
2.6
—
—
—
0
0
(3005785) Creatine kinase.MB [Mass/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
2.8
—
8.3
—
0
6
(3016502) Oxygen saturation in Arterial blood
0
6
0.00
0.00
0.0
1.8
—
95.3
—
0
6
(3022621) pH of Urine by Test strip
0
5
0.00
0.00
0.0
8.0
—
—
—
0
0
(46235355) HIV 1 and 2 tests - Meaningful Use set
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
(4035726)
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
(4010399)
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
(3030981) Hyaline casts [#/volume] in Urine by Automated count
0
6
0.00
0.00
0.0
2.0
—
0.0
—
0
6
(3008230) Borrelia burgdorferi IgM Ab [Units/volume] in Serum
0
5
0.00
0.00
0.0
2.4
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint E4_CARBABS and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have E4_CARBABS.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: E4_CARBABS – Other disorders of intestinal carbohydrate absorption

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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