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Wiskott-Aldrich syndrome

D3_WISKOTTALDRICH

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D82.0
  • Cause of death: ICD-10 D82.0

2 out of 7 registries used, show all original rules.

10

4. Check minimum number of events

None

10

5. Include endpoints

None

10

6. Filter based on genotype QC (FinnGen only)

9

Control definitions (FinnGen only)

Control exclude
D3_IMMUNEMECHANISM

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
D82
Name in latin
Syndroma Wiskott-Aldrich

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 85 36 49
Only index persons 71 33 38
Unadjusted period prevalence (%)
Whole population 0.00 0.00 0.00
Only index persons 0.00 0.00 0.00
Median age at first event (years)
Whole population - 56.89 38.62
Only index persons 46.00 56.01 37.31

-FinnGen-

Key figures

All Female Male
Number of individuals 9 - 5
Unadjusted period prevalence (%) 0.00 - 0.00
Median age at first event (years) 41.34 - 35.85

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
10
54
+∞
2.32
6.6
4.6
12.40
7.68
mm/h
—
10
47
0
23
0.00
0.93
0.0
1.5
—
—
—
0
0
5
30
2.31
0.55
2.0
1.7
79.06
61.24
ug/l
—
5
25
10
83
+∞
0.45
17.5
10.8
33.93
22.28
mg/l
—
10
68
10
88
+∞
0.22
18.4
13.4
85.10
74.51
umol/l
—
10
88
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
0.00
0.0
4.4
—
—
—
0
0
0
5
0.00
0.00
0.0
3.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.7
—
—
—
0
0
5
49
1.04
-0.00
8.2
3.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
3.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.0
—
—
—
0
0
10
95
+∞
-0.00
28.3
16.5
4.55
4.67
e12/l
—
10
90
0
6
0.00
-0.00
0.0
2.0
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint D3_WISKOTTALDRICH and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have D3_WISKOTTALDRICH.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: D3_WISKOTTALDRICH – Wiskott-Aldrich syndrome

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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