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This is a non-core endpoint: only basic statistics are computed.

Sequelae of toxic effects of substances chiefly nonmedicinal as to source

Endpoint Browser

ST19_SEQUEL_TOXIC_EFFEC_SUBST_CHIEF_NONME_SOURCE

Endpoint definition

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Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — T97
  • Cause of death: ICD-10 — T97

2 out of 7 registries used, show all original rules.

14

4. Check minimum number of events

None

14

5. Include endpoints

None

14

6. Filter based on genotype QC (FinnGen only)

14

Control definitions (FinnGen only)

Control exclude
ST19_SEQUEL_INJURI_POISO_OTHER_CONSE_EXTER_CAUSES

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
T9
Name in latin
Sequelae effectus toxici substantiarum praecipue origine non medicinalium

Case counts by codes

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FinnGen case counts by registry codes:

Not enough data for upset plot.

Full data table

Summary Statistics

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-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 14 7 7
Unadjusted period prevalence (%) 0.00 0.00 0.00
Median age at first event (years) 49.59 42.59 56.58

-FinnGen-

Age distribution of first events

010400123456789AgeIndividuals

-FinnGen-

Year distribution of first events

1970197519801985199019952000201020230.00.51.01.52.02.53.03.54.04.55.05.56.06.57.0YearIndividuals

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

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CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

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OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
8
26
5.76
2.53
4.3
3.2
97.50
91.85
%
—
8
26
5
14
4.92
1.79
1.8
3.5
597.40
624.64
mosm/kgh2o
—
5
14
6
25
3.41
1.43
10.3
4.4
—
—
—
0
0
7
31
3.48
1.35
1.4
1.7
—
—
—
0
0
7
34
3.09
1.26
7.0
4.5
—
—
—
0
0
6
30
2.73
1.02
1.0
2.2
—
—
—
0
0
7
42
2.32
0.85
1.1
3.2
—
—
—
0
0
5
26
2.42
0.80
2.6
2.9
—
—
—
0
0
8
54
2.11
0.60
2.6
4.2
—
0.00
—
0
7
8
57
1.93
0.58
1.8
3.2
—
0.00
—
0
7
14
124
+∞
0.44
36.1
11.9
—
—
—
0
0
14
122
+∞
0.43
42.7
14.4
73.71
77.02
umol/l
0.39
14
122
7
55
1.54
0.24
1.6
3.3
—
0.00
—
0
7
0
11
0.00
0.22
0.0
1.0
—
—
—
0
0
0
13
0.00
0.21
0.0
2.1
—
—
—
0
0
5
43
1.25
0.12
4.6
2.1
—
—
—
0
0
0
8
0.00
0.00
0.0
3.0
—
2.19
—
0
8
0
8
0.00
0.00
0.0
1.8
—
0.90
—
0
8
0
8
0.00
0.00
0.0
2.3
—
—
—
0
0
0
7
0.00
0.00
0.0
2.4
—
4.04
—
0
7
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
0.00
0.0
20.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
7
75
0.87
0.00
5.6
3.5
—
—
—
0
0
0
7
0.00
0.00
0.0
4.7
—
23.54
—
0
7
0
5
0.00
0.00
0.0
1.4
—
399.00
—
0
5
0
5
0.00
0.00
0.0
1.4
—
18.40
—
0
5

Mortality – FinRegistry

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This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

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Index endpoint: ST19_SEQUEL_TOXIC_EFFEC_SUBST_CHIEF_NONME_SOURCE – Sequelae of toxic effects of substances chiefly nonmedicinal as to source

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).