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This is a non-core endpoint: only basic statistics are computed.

Carcinoma in situ of respiratory system, other/unspecified

Endpoint Browser

CD2_INSITU_RESPNOS_EXALLC

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

-

2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — D02.3&, D02.4&
  • Hospital discharge: ICD-9 — 231[8-9]
  • Cause of death: ICD-10 — D02.3&, D02.4&
  • Cause of death: ICD-9 — 231[8-9]

2 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

None

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude
C3_CANCER, C3_CANCER_WIDE

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2

Case counts by codes

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FinnGen case counts by registry codes:

No upset plot: script not run.

No upset table: script not run.

Summary Statistics

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-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 19 6 13
Unadjusted period prevalence (%) 0.00 0.00 0.01
Median age at first event (years) 70.17 71.96 69.34

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

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CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

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OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
5
9
7.06
2.37
1.4
1.3
—
—
—
0
0
6
21
3.68
1.66
2.2
1.7
—
—
—
0
0
7
38
2.32
0.86
4.7
3.5
—
—
—
0
0
0
20
0.00
0.64
0.0
1.6
—
23.8
—
0
20
6
36
1.97
0.64
5.2
2.7
—
—
—
0
0
0
15
0.00
0.43
0.0
5.1
—
5.4
—
0
15
0
15
0.00
0.43
0.0
5.1
—
10.2
—
0
15
5
69
0.63
0.34
4.0
3.6
—
—
—
0
0
6
47
1.40
0.24
5.2
3.1
—
0.0
—
0
8
6
49
1.33
0.23
6.2
3.9
—
0.0
—
0
9
6
50
1.29
0.22
5.2
3.2
—
0.0
—
0
5
0
11
0.00
0.22
0.0
1.9
—
68.6
—
0
11
0
11
0.00
0.22
0.0
1.4
—
—
—
0
0
0
10
0.00
0.22
0.0
1.6
—
—
—
0
0
0
12
0.00
0.22
0.0
6.0
—
123.2
—
0
12
0
12
0.00
0.22
0.0
6.0
—
95.1
—
0
12
0
12
0.00
0.22
0.0
6.9
—
103.0
—
0
12
9
102
0.78
0.20
23.6
17.1
78.9
86.1
umol/l
—
9
102
5
42
1.26
0.11
1.4
2.5
—
—
—
0
0
8
71
1.22
0.09
3.8
4.1
—
—
—
0
0
6
67
0.85
0.09
3.8
3.8
7.7
6.9
mmol/l
—
6
61
9
100
0.81
0.09
16.0
15.5
—
—
—
0
0
0
7
0.00
0.00
0.0
2.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
1.2
—
0
6
0
5
0.00
0.00
0.0
2.6
—
—
—
0
0
0
6
0.00
0.00
0.0
10.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.8
—
24.2
—
0
6
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.5
—
—
—
0
0
0
8
0.00
0.00
0.0
7.7
—
93.1
—
0
8
0
5
0.00
0.00
0.0
1.4
—
3.7
—
0
5
0
6
0.00
0.00
0.0
2.3
—
—
—
0
0
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
828.4
—
0
5
0
9
0.00
0.00
0.0
2.3
—
25.3
—
0
9
0
8
0.00
0.00
0.0
2.5
—
—
—
0
0
0
8
0.00
0.00
0.0
7.6
—
0.9
—
0
8
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

↥

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

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Index endpoint: CD2_INSITU_RESPNOS_EXALLC – Carcinoma in situ of respiratory system, other/unspecified

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).