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Carcinoma in situ of middle ear and respiratory system

CD2_INSITU_EAR_RESP_EXALLC

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

None

-

2. Check conditions

None

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D02
  • Cause of death: ICD-10 D02

2 out of 7 registries used, show all original rules.

-

4. Check minimum number of events

None

-

5. Include endpoints

-

6. Filter based on genotype QC (FinnGen only)

None

-

Control definitions (FinnGen only)

Control exclude
C3_CANCER, C3_CANCER_WIDE

Extra metadata

Level in the ICD hierarchy
2
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
D00-D09
Name in latin
Carcinoma in situ auris mediae sive systematis respiratorii

Similar endpoints

List of similar endpoints to Carcinoma in situ of middle ear and respiratory system based on the number of shared cases.

Venn diagram with an highlighted set fully inside another set Similar with more cases:

Venn diagram with a set fully inside an highlighted set Similar with less cases:

Case counts by codes

FinnGen case counts by registry codes:

No upset plot: script not run.

No upset table: script not run.

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 165 44 121
Unadjusted period prevalence (%) 0.04 0.01 0.05
Median age at first event (years) 68.56 66.30 69.39

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
158
Matched controls
1581
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
D02.0
ICD-10 Finland
Carcinoma in situ: Larynx
+∞
52.0
47
*
C32.0
ICD-10 Finland
Malignant neoplasm: Glottis
+∞
50.8
46
*
DQB10
NOMESCO Finland
Endoscopic excision of lesion of larynx
128.4
44.6
46
5
130
Kela drug reimbursment
Malignant tumour
+∞
40.4
37
*
WF002
NOMESCO Finland
Radical radiotherapy
384.9
32.1
31
*
DQA10
NOMESCO Finland
Biopsy of larynx
369.0
31.0
30
*
D14.1
ICD-10 Finland
Benign neoplasm: Larynx
122.5
28.8
30
*
D38.1
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Trachea, bronchus and lung
91.7
27.9
30
*
ZXC10
NOMESCO Finland
Use of laser
42.4
25.4
31
9
R91
ICD-10 Finland
Abnormal findings on diagnostic imaging of lung
11.5
25.2
50
61
UDQ12
NOMESCO Finland
Flexible laryngoscopy
15.8
24.0
40
33
UGC12
NOMESCO Finland
Flexible bronchoscopy
11.3
22.4
44
52
J38.3
ICD-10 Finland
Other diseases of vocal cords
133.6
22.2
23
*
D38.0
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Larynx
253.7
22.2
22
*
8070/3-C32.9
ICD-O-3
Squamous cell carcinoma, NOS, of larynx, NOS
+∞
21.3
20
*
WZC00
NOMESCO Finland
Planning of intervention or health care consultation
6.0
21.0
70
184
C32.9
ICD-10 Finland
Malignant neoplasm: Larynx, unspecified
+∞
20.2
19
*
UDQ22
NOMESCO Finland
Microlaryngoscopy
80.0
19.2
21
*
C61
ICD-10 Finland
Malignant neoplasm of prostate
+∞
19.1
18
*
GD1CT
NOMESCO Finland
Biopsy of the lung with CT guidance
214.4
19.0
19
*
8070/2-C32.0
ICD-O-3
Squamous cell carcinoma in situ, NOS, of glottis
+∞
18.1
17
*
8140/3-C61.9
ICD-O-3
Adenocarcinoma, NOS, of prostate gland
+∞
18.1
17
*
J37.0
ICD-10 Finland
Chronic laryngitis
29.6
17.5
23
9
C34.12
ICD-10 Finland
Malignant tumor of the anterior, bronchial or pulmonary adenocarcinoma
+∞
17.0
16
*
XX3DW
NOMESCO Finland
Time consuming IT work
10.9
16.4
32
36
8140/2-C34.1
ICD-O-3
Adenocarcinoma in situ, NOS, of upper lobe, lung
+∞
15.9
15
*
A03FA01
ATC
metoclopramide; systemic, rectal
7.6
15.2
37
61
H02AB02
ATC
dexamethasone; systemic
63.0
15.1
17
*
8070/3-C32.0
ICD-O-3
Squamous cell carcinoma, NOS, of glottis
+∞
14.8
14
*
C320, 8077, 2
ICD-O-3
NA
+∞
14.8
14
*
C34.90
ICD-10 Finland
Malignant tumor in unspecified location in bronchus and lung without histology
+∞
13.7
13
*
EP1AE
NOMESCO Finland
Neck ultrasound examination
14.8
13.4
22
17
GDC01
NOMESCO Finland
Thoracoscopic lobectomy of lung
+∞
12.7
12
*
EN1BD
NOMESCO Finland
Very extensive CT examination of mouth and soft tissues of neck
50.9
12.1
14
*
UJC01
NOMESCO Finland
Scopy of lower throat
50.9
12.1
14
*
WZC30
NOMESCO Finland
Teaching
6.8
12.0
31
55
D02.2
ICD-10 Finland
Carcinoma in situ: Bronchus and lung
+∞
11.6
11
*
D02.3
ICD-10 Finland
Carcinoma in situ: Other parts of respiratory system
+∞
11.6
11
*
DQB70
NOMESCO Finland
Total excision of vocal cord
+∞
11.6
11
*
A04AA02
ATC
granisetron; systemic, transdermal
+∞
11.6
11
*
WZC20
NOMESCO Finland
Multidisciplinary treatment meeting
22.0
11.4
16
8
GD1BD
NOMESCO Finland
Thorax extensive CT-examination
7.8
10.9
25
37
WX408
NOMESCO Finland
General anesthesy, balanced
3.7
10.6
54
194
ZX012
NOMESCO Finland
Radiotherapy with large shaped fields - isocentric therapy
117.5
10.6
11
*
116
Kela drug reimbursment
Prostate cancer
+∞
10.5
10
*
WF049
NOMESCO Finland
Radiotherapy of metastasis
+∞
10.5
10
*
WD125
NOMESCO Finland
Demanding cystostatic therapy of methastized malignancy
+∞
10.5
10
*
C34.31
ICD-10 Finland
Malignant tumor of the lower lobe, bronchus or lung epidermoid carcinoma
+∞
10.5
10
*
WX404
NOMESCO Finland
Intravenous generell anesthesy
4.3
10.4
42
123
WF003
NOMESCO Finland
Adjuvant radiotherapy
+∞
9.5
9
*
8090/3-C44.3
ICD-O-3
Basal cell carcinoma, NOS, of skin of other and unspecified parts of face
+∞
9.5
9
*
C34.11
ICD-10 Finland
Malignant tumor of the anterior, bronchial or pulmonary epidermoid carcinoma
+∞
9.5
9
*
UDH02
NOMESCO Finland
Rhinopharyngoscopy
7.1
9.2
22
35
GD1AD
NOMESCO Finland
Thorax CT examination
8.8
9.2
19
24
JN5DR
NOMESCO Finland
PET-CT of upper body metabolism
39.1
9.1
11
*
WD325
NOMESCO Finland
Demanding therapy of methastized malignancy with biomodifiers
+∞
8.4
8
*
WX734
NOMESCO Finland
JET-ventilation
+∞
8.4
8
*
2310A
ICD-9 Finland
Carcinoma in situ of respiratory system, Larynx
+∞
8.4
8
*
C34.32
ICD-10 Finland
Malignant tumor of the lower lobe, bronchus or lung adenocarcinoma
+∞
8.4
8
*
WD105
NOMESCO Finland
Cystostatic therapy of methastized malignancy
+∞
8.4
8
*
DQB30
NOMESCO Finland
Laryngectomy
+∞
8.4
8
*
DQE00
NOMESCO Finland
Implantation of prosthetic replacement for larynx
+∞
8.4
8
*
WX402
NOMESCO Finland
General anaesthesia
4.1
7.7
30
85
JN4BD
NOMESCO Finland
Extensive body CT
5.5
7.6
22
45
WB103
NOMESCO Finland
Simple adjuvant cytostatic therapy
83.9
7.5
8
*
ZX090
NOMESCO Finland
Other technic of radiotherapy
+∞
7.3
7
*
8070/2-C32.9
ICD-O-3
Squamous cell carcinoma in situ, NOS, of larynx, NOS
+∞
7.3
7
*
YG1AD
NOMESCO Finland
CT examination of thorax for dose design of radiotherapy
+∞
7.3
7
*
UDQ02
NOMESCO Finland
Direct laryngoscopy
41.9
6.8
8
*
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
8.7
6.5
13
16
N02AA05
ATC
oxycodone; systemic
3.5
6.4
30
99
A04AA01
ATC
ondansetron; systemic, rectal
19.0
6.3
9
5
L02BB03
ATC
bicalutamide; oral
+∞
6.3
6
*
UGC18
NOMESCO Finland
Flexible bronchoscopy with biopsy of lung
+∞
6.3
6
*
C32.8
ICD-10 Finland
Malignant neoplasm: Overlapping lesion of larynx
+∞
6.3
6
*
NK6AN
NOMESCO Finland
Total body bone isotope imaging
+∞
6.3
6
*
8070/2-C34.3
ICD-O-3
Squamous cell carcinoma in situ, NOS, of lower lobe, lung
+∞
6.3
6
*
8140/2-C34.3
ICD-O-3
Adenocarcinoma in situ, NOS, of lower lobe, lung
+∞
6.3
6
*
8000/3-C34.9
ICD-O-3
Neoplasm, malignant of lung, NOS
+∞
6.3
6
*
C32.1
ICD-10 Finland
Malignant neoplasm: Supraglottis
+∞
6.3
6
*
YA1BD
NOMESCO Finland
Extensive CT examination of head and neck for dose design of radiotherapy
+∞
6.3
6
*
GD1AA
NOMESCO Finland
Thorax X-ray examination
2.3
6.1
77
455
TQW99
NOMESCO Finland
Other minor procedure on skin
6.3
6.0
15
26

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: CD2_INSITU_EAR_RESP_EXALLC – Carcinoma in situ of middle ear and respiratory system

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).