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This is a non-core endpoint: only basic statistics are computed.

Carcinoma in situ of middle ear and respiratory system

CD2_INSITU_EAR_RESP

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D02
  • Cause of death: ICD-10 D02

2 out of 7 registries used, show all original rules.

89

4. Check minimum number of events

None

89

5. Include endpoints

170

6. Filter based on genotype QC (FinnGen only)

167

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
2
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
D00-D09
Name in latin
Carcinoma in situ auris mediae sive systematis respiratorii

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 167 48 119
Unadjusted period prevalence (%) 0.04 0.02 0.05
Median age at first event (years) 68.52 66.17 69.47

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
170
Matched controls
1700
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
D02.0
ICD-10 Finland
Carcinoma in situ: Larynx
+∞
58.8
53
*
C32.0
ICD-10 Finland
Malignant neoplasm: Glottis
148.3
51.2
52
5
DQB10
NOMESCO Finland
Endoscopic excision of lesion of larynx
105.9
49.3
52
7
UDQ12
NOMESCO Finland
Flexible laryngoscopy
10.5
36.0
46
58
DQA10
NOMESCO Finland
Biopsy of larynx
84.2
31.2
34
5
ZXC10
NOMESCO Finland
Use of laser
37.6
28.6
36
12
D14.1
ICD-10 Finland
Benign neoplasm: Larynx
53.7
26.6
31
7
D38.1
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Trachea, bronchus and lung
10.2
24.4
30
35
D38.0
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Larynx
63.7
23.8
27
5
8070/3-C32.9
ICD-O-3
Squamous cell carcinoma, NOS, of larynx, NOS
264.1
23.2
23
*
C32.9
ICD-10 Finland
Malignant neoplasm: Larynx, unspecified
+∞
22.4
21
*
UDQ22
NOMESCO Finland
Microlaryngoscopy
41.5
20.5
25
7
J38.3
ICD-10 Finland
Other diseases of vocal cords
28.9
20.3
27
11
R91
ICD-10 Finland
Abnormal findings on diagnostic imaging of lung
5.1
19.5
51
131
UGC12
NOMESCO Finland
Flexible bronchoscopy
5.7
19.0
42
93
8140/2-C34.1
ICD-O-3
Adenocarcinoma in situ, NOS, of upper lobe, lung
+∞
18.0
17
*
C34.12
ICD-10 Finland
Malignant tumor of the anterior, bronchial or pulmonary adenocarcinoma
56.3
17.4
20
*
8070/2-C32.0
ICD-O-3
Squamous cell carcinoma in situ, NOS, of glottis
+∞
17.0
16
*
C320, 8077, 2
ICD-O-3
+∞
17.0
16
*
WF002
NOMESCO Finland
Radical radiotherapy
6.1
16.8
33
65
J37.0
ICD-10 Finland
Chronic laryngitis
13.2
16.0
28
25
EP1AE
NOMESCO Finland
Neck ultrasound examination
7.0
14.6
24
39
D02.2
ICD-10 Finland
Carcinoma in situ: Bronchus and lung
+∞
13.7
13
*
D02.3
ICD-10 Finland
Carcinoma in situ: Other parts of respiratory system
+∞
12.7
12
*
DQB70
NOMESCO Finland
Total excision of vocal cord
139.9
12.6
13
*
8070/3-C32.0
ICD-O-3
Squamous cell carcinoma, NOS, of glottis
139.9
12.6
13
*
GD1CT
NOMESCO Finland
Biopsy of the lung with CT guidance
17.6
12.5
19
12
UDH02
NOMESCO Finland
Rhinopharyngoscopy
5.4
12.1
26
55
WZC00
NOMESCO Finland
Treatment plan or consultation
3.1
11.8
81
386
DQB30
NOMESCO Finland
Laryngectomy
69.9
11.8
13
*
DQE00
NOMESCO Finland
Implantation of prosthetic replacement for larynx
128.3
11.6
12
*
EN1BD
NOMESCO Finland
Very extensive CT examination of mouth and soft tissues of neck
17.5
10.6
16
10
130
Kela drug reimbursment
Malignant tumour
3.7
10.4
38
122
XX3DW
NOMESCO Finland
Time consuming IT work
3.6
10.4
40
133
GD1BD
NOMESCO Finland
Thorax extensive CT-examination
4.7
10.0
25
60
UJC01
NOMESCO Finland
Scopy of lower throat
14.6
9.9
16
12
WX734
NOMESCO Finland
JET-ventilation
+∞
9.5
9
*
C32.1
ICD-10 Finland
Malignant neoplasm: Supraglottis
94.6
8.5
9
*
2310A
ICD-9 Finland
Carcinoma in situ of respiratory system, Larynx
+∞
8.4
8
*
WX408
NOMESCO Finland
General anesthesy, balanced
2.7
8.3
58
270
YA1BD
NOMESCO Finland
Extensive CT examination of head and neck for dose design of radiotherapy
26.4
7.7
10
*
WX402
NOMESCO Finland
General anaesthesia
2.9
7.6
41
166
GDC01
NOMESCO Finland
Thoracoscopic lobectomy of lung
14.2
7.5
12
9
WX404
NOMESCO Finland
Intravenous generell anesthesy
2.8
7.4
44
187
8070/2-C32.9
ICD-O-3
Squamous cell carcinoma in situ, NOS, of larynx, NOS
+∞
7.3
7
*
C34.90
ICD-10 Finland
Malignant tumor in unspecified location in bronchus and lung without histology
12.8
7.2
12
10
JN5DR
NOMESCO Finland
PET-CT of upper body metabolism
14.6
7.0
11
8
WX105
NOMESCO Finland
Surface analgesia on skin or mucosa
3.8
6.8
22
64
WZC30
NOMESCO Finland
Teaching
2.8
6.7
39
163
C32.8
ICD-10 Finland
Malignant neoplasm: Overlapping lesion of larynx
72.5
6.5
7
*
8140/2-C34.3
ICD-O-3
Adenocarcinoma in situ, NOS, of lower lobe, lung
+∞
6.3
6
*
GDB21
NOMESCO Finland
Thoracoscopic segmental resection of lung
+∞
6.3
6
*
A07AA02
ATC
nystatin; oral
4.0
6.1
18
49

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
37
115
3.83
10.61
1.8
1.4
—
—
—
0
0
85
487
2.49
7.85
3.8
2.2
—
—
—
0
0
33
140
2.68
5.49
1.2
1.5
—
—
—
0
0
40
205
2.24
4.40
1.8
2.1
—
—
—
0
0
10
19
5.52
3.89
2.8
4.7
—
—
—
0
0
96
705
1.83
3.64
17.3
16.0
1.37
1.33
inr
0.17
28
198
64
431
1.78
3.13
2.8
2.8
—
—
—
0
0
10
26
4.02
3.03
1.5
1.6
14.62
14.40
ug/l
—
10
26
65
446
1.74
2.95
3.8
3.2
2.34
2.34
mmol/l
0.06
57
382
89
670
1.69
2.85
6.2
6.8
1.21
1.21
mmol/l
0.03
80
564
30
164
2.01
2.76
1.4
1.3
—
—
—
0
0
82
613
1.65
2.64
5.8
6.1
1.21
1.20
mmol/l
0.43
77
548
27
147
1.99
2.51
3.0
4.0
—
—
—
0
0
18
87
2.20
2.26
1.7
1.5
—
—
—
0
0
19
97
2.08
2.10
1.5
1.3
—
—
—
0
0
89
713
1.52
1.95
10.9
10.1
4.47
4.25
e9/l
0.36
81
623
102
855
1.48
1.71
4.8
4.2
—
—
—
0
0
6
21
2.92
1.52
1.5
2.0
86.43
90.70
%
—
6
21
71
569
1.43
1.43
5.8
5.5
62.75
58.29
%
2.46
66
532
51
385
1.46
1.41
4.2
4.2
7.39
7.40
ph
0.30
14
79
69
552
1.42
1.40
5.8
5.6
0.66
0.61
%
0.30
64
511
70
566
1.40
1.33
5.8
5.6
2.53
2.73
%
0.38
65
525
71
579
1.39
1.27
5.9
6.2
—
—
—
0
0
8
36
2.28
1.26
6.0
2.8
—
—
—
0
0
71
581
1.38
1.24
6.0
5.8
23.15
26.02
%
1.68
65
541
23
151
1.61
1.19
1.5
1.9
—
—
—
0
0
5
20
2.54
1.16
1.8
2.4
—
—
—
0
0
55
436
1.39
1.15
4.5
4.6
—
—
—
0
0
69
569
1.36
1.13
6.1
5.9
9.43
8.91
%
0.62
64
530
24
163
1.55
1.09
7.0
4.7
3.76
47.32
ug/l
0.84
24
137
15
90
1.73
1.08
2.7
4.4
0.00
0.27
%
—
8
33
39
294
1.42
1.08
2.8
3.1
548.64
565.07
mosm/kgh2o
0.14
33
245
16
98
1.70
1.07
2.5
4.2
0.00
0.13
%
—
9
39
10
53
1.94
1.03
4.7
3.0
4.21
4.20
pmol/l
—
10
43
50
397
1.37
1.02
3.2
3.0
7.35
7.25
mmol/l
0.08
39
314
17
108
1.64
1.01
2.5
4.0
0.40
0.98
%
—
10
49
72
607
1.32
0.99
5.3
5.5
0.71
0.60
e9/l
1.87
63
524
12
69
1.80
0.99
3.1
2.7
—
—
—
0
0
5
23
2.21
0.98
1.4
1.2
—
—
—
0
0
72
608
1.32
0.98
5.3
5.5
0.04
0.04
e9/l
0.66
63
527
73
621
1.31
0.93
5.5
5.6
1.74
1.82
e9/l
0.28
65
553
6
28
2.18
0.92
1.2
1.0
—
—
—
0
0
45
363
1.33
0.83
3.0
3.1
—
—
—
0
0
15
99
1.57
0.78
1.0
1.4
—
—
—
0
0
48
394
1.30
0.78
3.4
3.0
40.55
215.25
mg/l
0.57
31
260
13
83
1.61
0.77
6.8
8.5
—
—
—
0
0
51
423
1.29
0.77
4.2
3.7
3.03
8.13
mg/mmol
1.93
31
272
14
92
1.57
0.75
1.0
1.4
—
—
—
0
0
96
863
1.26
0.74
5.0
3.7
15.40
14.96
pmol/l
0.88
86
748
49
406
1.29
0.74
2.8
3.1
—
—
—
0
0
52
435
1.28
0.73
6.2
4.5
—
—
—
0
0
16
110
1.50
0.71
4.4
3.9
—
—
—
0
0
5
26
1.95
0.71
1.2
1.3
—
—
—
0
0
72
630
1.25
0.69
5.5
5.7
0.19
0.19
e9/l
0.05
66
553
14
94
1.53
0.69
2.8
3.9
0.00
0.42
%
—
7
36
5
91
0.54
0.69
2.4
2.6
—
—
—
0
0
68
593
1.24
0.67
4.9
5.4
0.00
0.00
estimate
-0.00
18
115
68
599
1.23
0.60
3.8
4.1
0.00
0.01
estimate
0.50
18
123
8
52
1.56
0.60
2.1
3.4
41.73
37.42
g/l
—
8
46
30
240
1.30
0.59
3.3
1.9
29.77
29.78
s
0.00
30
230
36
296
1.27
0.58
2.9
2.6
8.03
4.01
e6/l
0.45
30
262
63
553
1.22
0.58
2.1
2.1
99.78
92.72
pmol/l
0.60
41
296
6
36
1.69
0.57
1.0
1.4
—
—
—
0
0
16
116
1.42
0.57
5.1
4.5
—
—
—
0
0
6
37
1.64
0.56
2.2
1.7
—
—
—
0
0
68
604
1.21
0.55
3.7
4.1
0.00
0.00
estimate
-0.00
17
106
94
862
1.20
0.54
4.9
4.4
—
—
—
0
0
99
913
1.20
0.53
4.7
4.2
14.91
13.54
mm/h
0.33
88
828
24
190
1.31
0.51
2.0
2.4
1.56
1.78
%
0.77
24
164
59
522
1.20
0.49
15.1
11.1
0.00
0.01
e9/l
0.45
44
430
36
304
1.23
0.47
1.9
1.7
1168.61
1142.88
nmol/l
0.07
30
224
14
103
1.39
0.47
1.6
2.8
—
—
—
0
0
30
358
0.80
0.46
3.8
3.2
—
—
—
0
0
127
1206
1.21
0.46
23.8
18.0
28.58
27.48
mg/l
0.14
116
993
16
122
1.34
0.44
1.7
3.2
68.21
66.16
g/l
0.59
16
110
5
31
1.63
0.43
1.8
3.3
—
—
—
0
0
54
481
1.18
0.41
3.2
3.9
381.80
63.13
e6/l
0.76
38
356
14
106
1.35
0.40
2.1
3.2
4.35
4.27
kpa
0.07
14
99
12
158
0.74
0.39
1.2
1.3
54.12
11.15
u/ml
—
5
58
17
211
0.78
0.37
1.2
1.4
2.91
2.61
g/l
0.30
11
120
65
593
1.16
0.37
5.5
4.4
51.54
42.04
ng/l
0.21
57
455
5
80
0.61
0.36
2.0
2.5
—
—
—
0
0
41
361
1.18
0.36
1.4
1.7
20.84
21.30
nmol/l
0.06
33
298
114
1193
0.87
0.35
5.2
5.4
2.39
2.59
mmol/l
1.39
101
1073
11
82
1.37
0.35
3.1
2.9
—
—
—
0
0
21
173
1.24
0.35
1.4
1.3
—
—
—
0
0
6
46
1.32
0.33
1.5
5.1
—
—
—
0
0
40
354
1.17
0.33
4.1
4.3
0.00
0.00
estimate
-0.00
14
103
107
1120
0.88
0.31
4.4
4.3
1.27
1.25
mmol/l
0.07
94
998
43
386
1.15
0.30
3.1
3.2
1.52
0.49
e6/l
0.53
34
296
111
1157
0.88
0.29
4.8
4.8
1.44
1.43
mmol/l
0.11
99
1039
31
272
1.17
0.28
2.0
1.7
1.08
1.51
mg/l
0.81
23
213
114
1093
1.13
0.28
6.0
4.4
1.94
2.00
mu/l
0.17
100
953
13
104
1.27
0.27
1.8
2.0
7.79
12.86
nmol/l
1.89
13
89
47
428
1.14
0.27
3.0
3.4
127.54
221.42
e6/l
0.24
37
334
11
138
0.78
0.26
1.6
1.3
—
—
—
0
0
14
170
0.81
0.26
1.1
1.2
48.02
43.31
iu/ml
—
6
63
37
333
1.14
0.25
4.4
3.6
—
—
—
0
0
5
40
1.26
0.22
2.4
2.5
1.12
1.70
mg/l
—
5
32
5
42
1.20
0.21
2.6
3.2
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
2.0
—
2.69
—
0
10
0
10
0.00
0.21
0.0
2.0
—
1.56
—
0
10
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
2.3
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
19
218
0.86
0.21
2.3
3.2
1.85
2.01
e6/l
0.05
11
125
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
33
300
1.12
0.19
8.0
7.0
—
—
—
0
0
25
279
0.88
0.19
3.4
4.1
—
—
—
0
0
113
1164
0.91
0.18
4.7
4.8
4.34
4.44
mmol/l
0.40
101
1056
7
59
1.19
0.18
1.0
1.3
—
—
—
0
0
37
342
1.10
0.17
2.4
3.0
361.32
7291.49
umol/l
1.49
28
286
121
1179
1.09
0.16
5.5
5.1
6.29
6.14
mmol/l
0.58
108
1051
7
87
0.80
0.15
1.7
3.4
0.98
0.19
e6/l
—
7
87
19
212
0.88
0.15
2.1
2.4
2.27
2.27
g/l
0.01
19
193
37
395
0.92
0.13
3.4
3.2
0.92
0.77
ug/l
0.65
29
280
28
299
0.92
0.10
2.0
1.8
427.18
457.33
pmol/l
0.21
22
245
5
43
1.17
0.10
1.0
2.0
—
—
—
0
0
5
45
1.11
0.10
1.0
1.1
—
—
—
0
0
72
698
1.05
0.09
5.8
5.4
2.41
2.85
ug/l
0.35
64
602
11
124
0.88
0.09
1.2
1.5
—
—
—
0
0
6
57
1.05
0.08
3.3
5.0
—
—
—
0
0
5
62
0.80
0.08
2.6
3.9
10.40
1398.77
u/ml
—
5
53
32
306
1.06
0.06
1.6
1.4
—
—
—
0
0
13
119
1.10
0.06
4.0
3.6
—
—
—
0
0
11
102
1.08
0.03
1.8
1.6
—
—
—
0
0
13
123
1.06
0.01
3.5
8.3
—
—
—
0
0
99
997
0.98
0.01
27.7
20.9
16.33
15.61
%
0.45
99
979
113
1136
0.98
0.00
8.4
6.4
41.83
41.20
mmol/mol
0.31
101
1040
123
1229
1.00
0.00
26.0
16.7
—
—
—
0
0
130
1305
0.98
0.00
35.3
25.8
39.26
39.41
%
0.09
118
1207
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
0
8
0.00
0.00
0.0
1.8
—
—
—
0
0
6
63
0.95
0.00
1.0
1.3
—
—
—
0
0
0
6
0.00
0.00
0.0
2.8
—
2025.00
—
0
6
0
8
0.00
0.00
0.0
1.8
—
—
—
0
0
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
152.00
—
0
6
0
8
0.00
0.00
0.0
2.3
—
90.25
—
0
8
0
8
0.00
0.00
0.0
1.4
—
20.69
—
0
8
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
1.75
—
0
6
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
83.48
—
0
5
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
41.00
—
0
5
0
7
0.00
-0.00
0.0
1.6
—
1.11
—
0
7
0
5
0.00
-0.00
0.0
1.2
—
282.40
—
0
5
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
3.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
2.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.9
—
6.77
—
0
9
0
5
0.00
-0.00
0.0
1.6
—
1.78
—
0
5
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.7
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.6
—
27.86
—
0
7
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.0
—
—
—
0
0
7
69
1.02
-0.00
1.6
4.1
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: CD2_INSITU_EAR_RESP – Carcinoma in situ of middle ear and respiratory system

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).