This is a non-core endpoint: only basic statistics are computed.
Reactive perforating collagenosis
L12_REACPERFCOLLAG
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
15 |
4. Check minimum number of eventsNone |
15 |
5. Include endpointsNone |
15 |
6. Filter based on genotype QC (FinnGen only) |
15 |
Control definitions (FinnGen only)
- Control exclude
- L12_OTHERSKINSUBCUTIS
Extra metadata
- Level in the ICD hierarchy
- 4
- First used in FinnGen datafreeze
- DF2
- Parent code in ICD-10
- L87
- Name in latin
- Collagenosis perforans reactiva
Similar endpoints
↥List of similar endpoints to
Reactive perforating collagenosis
based on the number of shared cases.
Similar with more cases:
- Transepidermal elimination disorders
- Other disorders of skin and subcutaneous tissue
- Diseases of the skin and subcutaneous tissue
- Diseases of the respiratory system
- Diseases of the musculoskeletal system and connective tissue
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | |||
| Whole population | 107 | 75 | 30 |
| Only index persons | 87 | 64 | 23 |
| Unadjusted period prevalence (%) | |||
| Whole population | 0.00 | 0.00 | 0.00 |
| Only index persons | 0.00 | 0.00 | 0.00 |
| Median age at first event (years) | |||
| Whole population | 55.07 | 53.85 | 57.15 |
| Only index persons | 52.73 | 52.42 | 53.62 |
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 15 | 10 | 5 |
| Unadjusted period prevalence (%) | 0.00 | 0.00 | 0.00 |
| Median age at first event (years) | 53.74 | 54.40 | 52.42 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
No data
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
5
12
5.65
2.00
2.2
1.9
—
—
—
0
0
6
29
2.76
1.04
5.5
1.9
276.0
121.3
u/l
—
6
29
5
30
1.99
0.50
4.4
2.2
—
—
—
0
0
7
50
1.74
0.41
26.9
15.7
1.2
1.2
mmol/l
—
7
45
6
46
1.50
0.25
4.5
7.6
—
—
—
0
0
10
91
1.29
0.11
4.4
3.7
15.4
14.5
pmol/l
—
10
83
8
88
0.81
0.10
4.0
3.2
44.4
61.3
u/l
—
8
80
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
6
0.00
0.00
0.0
3.3
—
30.2
—
0
6
Mortality – FinRegistry
↥Association
Association between endpoint L12_REACPERFCOLLAG and mortality.
Females
No dataMales
No dataMortality risk
Mortality risk for people of age
years, who have L12_REACPERFCOLLAG.| N-year risk | Females | Males |
|---|---|---|
| 1 | No data | No data |
| 5 | No data | No data |
| 10 | No data | No data |
| 15 | No data | No data |
| 20 | No data | No data |
Relationships between endpoints
↥Index endpoint: L12_REACPERFCOLLAG – Reactive perforating collagenosis
GWS hits: -
Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
Loading data