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This is a non-core endpoint: only basic statistics are computed.

Traumatic amputation at neck level

Endpoint Browser

ST19_TRAUMAT_AMPUT_NECK_LEVEL

Endpoint definition

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Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — S18
  • Cause of death: ICD-10 — S18

2 out of 7 registries used, show all original rules.

20

4. Check minimum number of events

None

20

5. Include endpoints

None

20

6. Filter based on genotype QC (FinnGen only)

20

Control definitions (FinnGen only)

Control exclude
ST19_INJURI_NECK

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
S1
Name in latin
Amputatio traumatica colli

Case counts by codes

↥

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

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-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 20 6 14
Unadjusted period prevalence (%) 0.00 0.00 0.01
Median age at first event (years) 57.98 64.92 55.01

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

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CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

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OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
8
18
6.64
3.20
4.3
1.7
—
—
—
0
0
7
14
7.04
3.04
1.4
1.2
—
—
—
0
0
8
26
4.42
2.33
4.8
1.7
—
—
—
0
0
9
33
4.10
2.31
5.6
2.5
—
—
—
0
0
8
31
3.61
1.92
6.1
6.4
—
—
—
0
0
10
44
3.55
1.91
3.6
5.1
—
—
—
0
0
10
45
3.44
1.83
6.7
3.1
—
—
—
0
0
10
46
3.35
1.75
12.4
6.6
—
—
—
0
0
5
20
2.98
1.23
12.0
13.2
105.2
103.2
mmol/l
—
5
20
8
44
2.35
1.02
4.4
3.1
—
—
—
0
0
8
45
2.29
1.00
7.6
7.2
—
—
—
0
0
5
27
2.13
0.74
1.4
1.7
—
—
—
0
0
5
32
1.74
0.46
19.6
2.7
—
—
—
0
0
12
95
1.65
0.45
5.2
6.1
6.5
6.8
mmol/l
0.18
12
89
8
62
1.48
0.34
14.9
2.7
—
—
—
0
0
5
38
1.42
0.26
9.6
3.5
—
—
—
0
0
6
47
1.39
0.23
4.2
2.9
63604.8
10885.4
umol/l
—
6
39
0
12
0.00
0.22
0.0
1.4
—
—
—
0
0
13
114
1.40
0.20
4.5
4.1
—
—
—
0
0
11
95
1.35
0.19
10.3
4.1
—
—
—
0
0
5
43
1.22
0.11
3.0
4.4
—
—
—
0
0
5
60
0.78
0.10
1.8
2.1
—
—
—
0
0
7
65
1.12
0.09
2.9
2.8
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
2.1
—
26.3
—
0
8
0
6
0.00
0.00
0.0
4.0
—
—
—
0
0
0
6
0.00
0.00
0.0
9.2
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

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This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

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Index endpoint: ST19_TRAUMAT_AMPUT_NECK_LEVEL – Traumatic amputation at neck level

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).