This is a non-core endpoint: only basic statistics are computed.
Carcinoma in situ of other/unspecified digestive organs
CD2_INSITU_DIGESTIVE_NOS_EXALLC
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
|
1. Apply sex-specific ruleNone |
- |
2. Check conditionsNone |
|
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
2 out of 7 registries used, show all original rules. |
- |
4. Check minimum number of eventsNone |
- |
5. Include endpointsNone |
- |
6. Filter based on genotype QC (FinnGen only)None |
- |
Control definitions (FinnGen only)
- Control exclude
- C3_CANCER, C3_CANCER_WIDE
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF2
Similar endpoints
↥List of similar endpoints to
Carcinoma in situ of other/unspecified digestive organs
based on the number of shared cases.
Similar with more cases:
- Carcinoma in situ of other/unspecified digestive organs
- Carcinoma in situ of other and unspecified digestive organs
- Carcinoma in situ of other and unspecified digestive organs
- In situ neoplasms
- In situ neoplasms
Similar with less cases:
Case counts by codes
↥FinnGen case counts by registry codes:
No upset plot: script not run.
No upset table: script not run.
Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 13 | 5 | 8 |
| Unadjusted period prevalence (%) | 0.00 | 0.00 | 0.00 |
| Median age at first event (years) | 58.71 | 49.52 | 64.44 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
7
47
2.05
0.62
12.9
7.8
3.9
4.8
e9/l
—
7
42
8
99
0.50
0.50
34.3
16.6
139.8
139.3
mmol/l
—
8
94
8
98
0.53
0.49
28.9
12.7
28.0
24.3
mg/l
—
8
72
6
42
1.79
0.44
6.0
3.7
—
—
—
0
0
8
95
0.59
0.29
6.0
5.3
5.9
6.0
mmol/l
—
8
87
6
46
1.56
0.26
7.2
4.8
1.2
1.2
mmol/l
—
6
37
0
10
0.00
0.22
0.0
5.7
—
—
—
0
0
0
12
0.00
0.22
0.0
1.1
—
—
—
0
0
5
42
1.31
0.12
6.8
5.2
1.2
1.2
mmol/l
—
5
36
8
73
1.25
0.11
10.3
5.4
79.1
75.9
u/l
—
8
65
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
2.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.9
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
7
0.00
0.00
0.0
5.4
—
4.1
—
0
7
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: CD2_INSITU_DIGESTIVE_NOS_EXALLC – Carcinoma in situ of other/unspecified digestive organs
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).