This is a non-core endpoint: only basic statistics are computed.
See these related core endpoints for full statistics:
Squamous cell neoplasms and carcinoma of rectum, excluding all cancers (controls excluding all cancers)
C3_RECTUM_SQUAM_EXALLC
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
1 out of 7 registries used, show all original rules. |
37 |
4. Check minimum number of eventsNone |
37 |
5. Include endpointsNone |
37 |
6. Filter based on genotype QC (FinnGen only) |
37 |
Control definitions (FinnGen only)
- Control exclude
- C3_CANCER, C3_CANCER_WIDE_EXALLC
Extra metadata
- First used in FinnGen datafreeze
- DF12
Similar endpoints
↥List of similar endpoints to
Squamous cell neoplasms and carcinoma of rectum, excluding all cancers (controls excluding all cancers)
based on the number of shared cases.
Similar with more cases:
- Squamous cell neoplasms and carcinoma of rectum
- Malignant neoplasm of rectum
- Malignant neoplasm of rectum, excluding all cancers (controls excluding all cancers)
- Colorectal cancer
- Colorectal cancer, excluding all cancers (controls excluding all cancers)
Similar with less cases:
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 37 | 30 | 7 |
| Unadjusted period prevalence (%) | 0.01 | 0.01 | 0.00 |
| Median age at first event (years) | 62.27 | 60.13 | 71.42 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
16
41
6.11
6.53
2.0
1.8
0.8
0.8
mmol/l
0.94
16
36
28
127
5.93
5.84
9.1
3.9
35.7
36.1
g/l
0.15
28
120
22
91
4.50
4.81
8.4
2.0
2.3
2.4
mmol/l
0.55
22
76
13
45
3.91
3.44
2.5
2.8
2.7
5.3
e6/l
—
7
24
20
93
3.50
3.42
3.7
3.0
—
—
—
0
0
28
164
3.90
3.39
10.2
3.3
7.9
10.0
umol/l
2.55
28
150
7
11
7.54
3.35
6.1
6.9
24.7
26.0
mmol/l
—
7
11
8
16
6.05
3.26
1.0
1.4
—
—
—
0
0
15
62
3.39
3.02
2.4
1.9
—
—
—
0
0
22
123
2.95
2.56
5.8
3.7
—
—
—
0
0
12
51
3.00
2.23
5.0
2.0
2.5
2.4
mmol/l
0.32
12
39
12
55
2.75
1.92
2.1
2.5
0.2
1.2
e6/l
—
6
33
7
23
3.50
1.91
1.7
1.9
—
—
—
0
0
7
23
3.50
1.91
1.7
1.9
—
—
—
0
0
5
14
3.95
1.67
6.0
7.9
0.9
1.7
%
—
5
14
5
14
3.95
1.67
1.0
1.1
—
—
—
0
0
19
121
2.17
1.44
2.2
1.9
87.1
97.1
pmol/l
—
10
45
13
71
2.28
1.42
1.9
1.3
—
—
—
0
0
8
34
2.72
1.39
2.4
1.8
—
—
—
0
0
6
31
2.11
0.89
8.3
6.2
-0.0
2.2
mmol/l
—
6
25
15
102
1.79
0.85
4.9
2.1
59.5
56.8
u/l
0.13
15
93
26
301
0.54
0.79
3.7
6.2
36.7
40.4
mmol/mol
2.56
21
282
5
26
2.06
0.73
1.4
2.2
—
—
—
0
0
0
19
0.00
0.62
0.0
1.2
—
—
—
0
0
14
104
1.56
0.53
2.6
2.8
24.1
29.4
u/l
0.76
14
97
0
16
0.00
0.42
0.0
1.2
—
—
—
0
0
0
18
0.00
0.41
0.0
1.1
—
—
—
0
0
20
171
1.37
0.34
2.8
2.7
—
—
—
0
0
30
316
0.73
0.33
3.7
4.9
5.7
5.9
mmol/l
0.99
25
291
9
74
1.28
0.28
1.4
1.8
3.6
0.7
mg/l
—
9
65
19
167
1.28
0.24
6.6
4.0
6.3
6.7
mmol/l
0.72
19
152
0
10
0.00
0.22
0.0
1.0
—
—
—
0
0
6
52
1.18
0.20
1.7
1.3
—
—
—
0
0
28
293
0.82
0.17
4.7
5.0
2.0
1.9
mu/l
0.07
23
268
12
103
1.24
0.16
1.2
2.0
96.0
115.9
u/l
0.24
12
97
12
129
0.90
0.04
2.6
2.3
74.7
79.1
nmol/l
0.21
12
115
12
113
1.09
0.02
3.7
4.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.5
—
—
—
0
0
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
8
80
1.00
0.00
1.4
2.4
30991.3
11558.1
umol/l
—
8
67
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
5.0
—
25.1
—
0
7
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
66.8
—
0
9
0
9
0.00
-0.00
0.0
1.9
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: C3_RECTUM_SQUAM_EXALLC – Squamous cell neoplasms and carcinoma of rectum, excluding all cancers (controls excluding all cancers)
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).