This is a non-core endpoint: only basic statistics are computed.
See these related core endpoints for full statistics:
Indeterminate sex and pseudohermaphroditism
Q17_INDET_SEX_PSEUDOHE
pseudohermaphroditism: A condition consisting of possessing the internal reproductive organs of one sex while exhibiting some of the secondary sex characteristics of the opposite sex.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
35 |
4. Check minimum number of eventsNone |
35 |
5. Include endpointsNone |
35 |
6. Filter based on genotype QC (FinnGen only) |
35 |
Control definitions (FinnGen only)
- Control exclude
- Q17_CONGEN_MALFO_GENITAL_ORGANS
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF4
- Parent code in ICD-10
- Q5
- Name in latin
- Pseudohermaphroditismus
Similar endpoints
↥List of similar endpoints to
Indeterminate sex and pseudohermaphroditism
based on the number of shared cases.
Similar with more cases:
- Congenital malformations of genital organs
- Congenital malformations, deformations and chromosomal abnormalities
- Any operation in hilmo
- Any event in hilmo or specialist outpatient
- Any prescribed medicine buy
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | |||
| Whole population | 331 | 197 | 133 |
| Only index persons | 269 | 168 | 101 |
| Unadjusted period prevalence (%) | |||
| Whole population | 0.00 | 0.01 | 0.00 |
| Only index persons | 0.01 | 0.01 | 0.00 |
| Median age at first event (years) | |||
| Whole population | 27.67 | 40.18 | 8.92 |
| Only index persons | 40.77 | 46.11 | 31.87 |
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 35 | 24 | 11 |
| Unadjusted period prevalence (%) | 0.01 | 0.01 | 0.00 |
| Median age at first event (years) | 54.81 | 53.61 | 57.42 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
No data
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
No data available
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
7
19
4.33
2.28
2.9
2.6
4.4
4.5
pmol/l
—
7
14
5
12
4.66
1.89
8.6
1.5
7.6
14.0
nmol/l
—
5
12
18
119
2.06
1.21
3.1
2.4
71.9
97.3
ug/l
0.82
18
101
7
36
2.17
1.04
8.9
7.8
—
—
—
0
0
7
38
2.05
0.79
6.0
5.2
35.0
35.0
%
—
7
21
16
114
1.74
0.78
5.2
4.3
78.3
58.2
ng/l
0.11
11
86
11
71
1.80
0.73
2.4
2.1
2.8
3.3
mg/l
0.42
11
58
6
99
0.53
0.64
1.5
2.8
21.5
27.1
u/l
—
6
92
9
120
0.66
0.45
3.0
3.4
—
—
—
0
0
15
118
1.47
0.43
5.1
4.6
—
—
—
0
0
0
18
0.00
0.41
0.0
1.4
—
—
—
0
0
15
125
1.35
0.29
2.2
2.0
107.1
94.7
pmol/l
—
7
51
0
10
0.00
0.22
0.0
1.3
—
—
—
0
0
0
10
0.00
0.22
0.0
1.3
—
—
—
0
0
29
299
0.82
0.21
17.6
19.2
140.1
139.7
mmol/l
0.48
29
286
29
299
0.82
0.21
17.6
19.1
3.9
4.0
mmol/l
0.18
29
286
5
65
0.73
0.19
3.4
4.5
1154.4
105.9
ng/l
—
5
55
15
168
0.81
0.16
2.7
2.6
—
—
—
0
0
16
145
1.19
0.12
4.9
4.2
—
—
—
0
0
5
45
1.13
0.10
1.8
1.2
—
—
—
0
0
30
304
0.91
0.10
16.2
18.9
73.9
77.5
umol/l
0.35
30
304
5
63
0.76
0.09
4.0
4.8
1.6
1.8
ug/l
—
5
54
28
270
1.18
0.08
12.2
16.5
81.1
75.8
ml/min/173m2
0.59
23
217
7
80
0.84
0.08
1.1
1.7
1.4
1.2
mmol/l
—
7
65
25
261
0.85
0.08
7.3
6.4
39.1
40.5
mmol/mol
0.35
25
240
13
138
0.91
0.03
3.7
3.9
36.1
35.1
g/l
0.31
13
129
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
9
97
0.90
0.00
2.6
2.5
44.1
53.0
u/l
—
9
90
0
5
0.00
0.00
0.0
2.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
2.2
—
—
—
0
0
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
0
8
0.00
0.00
0.0
4.5
—
—
—
0
0
0
6
0.00
0.00
0.0
2.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
2.2
—
199.0
—
0
6
0
9
0.00
0.00
0.0
5.8
—
96.9
—
0
9
0
7
0.00
0.00
0.0
2.1
—
—
—
0
0
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
2.0
—
—
—
0
0
0
7
0.00
0.00
0.0
2.1
—
—
—
0
0
0
7
0.00
0.00
0.0
4.3
—
3.5
—
0
7
5
57
0.86
0.00
1.2
1.6
—
—
—
0
0
0
9
0.00
0.00
0.0
1.7
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
0.00
0.0
1.6
—
—
—
0
0
Mortality – FinRegistry
↥Association
Association between endpoint Q17_INDET_SEX_PSEUDOHE and mortality.
Females
No dataMales
No dataMortality risk
Mortality risk for people of age
years, who have Q17_INDET_SEX_PSEUDOHE.| N-year risk | Females | Males |
|---|---|---|
| 1 | No data | No data |
| 5 | No data | No data |
| 10 | No data | No data |
| 15 | No data | No data |
| 20 | No data | No data |
Relationships between endpoints
↥Index endpoint: Q17_INDET_SEX_PSEUDOHE – Indeterminate sex and pseudohermaphroditism
GWS hits: -
Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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