Drug-induced acute pancreatitis

DRUGADVERS_ACUTE_PANCREATIT

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 K85.3#

1 out of 7 registries used, show all original rules.

57

4. Check minimum number of events

None

57

5. Include endpoints

None

57

6. Filter based on genotype QC (FinnGen only)

57

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
C
First used in FinnGen datafreeze
DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 273 132 141
Only index persons 265 130 135
Unadjusted period prevalence (%)
Whole population 0.00 0.00 0.00
Only index persons 0.00 0.00 0.01
Median age at first event (years)
Whole population - 50.38 50.23
Only index persons 50.98 50.75 51.19

-FinnGen-

Key figures

All Female Male
Number of individuals 57 30 27
Unadjusted period prevalence (%) 0.01 0.01 0.01
Median age at first event (years) 47.14 50.82 43.06

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
50
Matched controls
502
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
K85.3
ICD-10 Finland
Drug-induced acute pancreatitis
+∞
71.5
50
*
K85.9
ICD-10 Finland
Acute pancreatitis, unspecified
125.1
16.8
17
*
208
Kela drug reimbursment
Ulcerative colitis and Crohn's disease
26.7
14.5
20
12
JN1AE
NOMESCO Finland
Ultrasound examination of upper part of abdomen
15.3
11.3
19
19
L04AX01
ATC
azathioprine; systemic
17.4
10.3
16
13
JN3AD
NOMESCO Finland
Abdominal CT examination
20.9
9.7
14
9
A07EA06
ATC
budesonide; oral, local oral
20.9
9.7
14
9
K50.8
ICD-10 Finland
Other Crohn disease
61.1
9.0
10
*
A07EC02
ATC
mesalazine; oral, rectal
13.7
8.8
15
15
GD1AA
NOMESCO Finland
Thorax X-ray examination
6.3
8.6
33
118
L01BB02
ATC
mercaptopurine; oral
53.7
8.0
9
*
K85.0
ICD-10 Finland
Idiopathic acute pancreatitis
93.4
7.6
8
*
K85.8
ICD-10 Finland
Other acute pancreatitis
93.4
7.6
8
*
H02AB06
ATC
prednisolone; systemic
5.2
7.2
33
135
A12AX
ATC
Calcium, combinations with vitamin D and/or other drugs
5.7
6.6
21
56
K51.5
ICD-10 Finland
Left sided colitis
15.2
6.4
10
8
UJF32
NOMESCO Finland
Coloscopy
5.2
6.1
21
61

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
39
80
13.27
21.98
6.8
4.5
—
—
—
0
0
48
168
12.71
15.23
13.4
4.0
34.2
36.6
g/l
1.66
48
159
22
41
8.11
12.50
2.1
1.4
—
—
—
0
0
50
224
10.99
12.19
24.4
5.9
14.0
11.1
umol/l
0.55
50
213
43
164
7.60
11.58
23.2
6.3
—
—
—
0
0
35
111
6.58
11.52
8.3
3.8
7.4
7.4
ph
—
6
13
50
240
9.79
10.95
25.1
6.7
0.6
0.6
e9/l
1.17
45
211
50
241
9.72
10.89
25.1
6.7
0.0
0.0
e9/l
0.58
45
211
49
248
7.93
9.48
25.8
6.7
2.1
2.0
e9/l
0.28
43
221
49
248
7.93
9.48
28.7
6.8
0.2
0.2
e9/l
1.37
44
221
33
114
5.50
9.46
4.7
2.3
0.2
0.3
e6/l
0.55
27
86
25
72
5.40
8.77
2.5
2.2
502.8
600.2
mosm/kgh2o
1.25
20
64
33
121
5.10
8.63
4.5
2.3
20.3
11.5
e6/l
0.46
27
93
37
149
5.23
8.59
6.4
2.9
47.6
38.4
e6/l
0.12
28
102
20
49
5.75
8.36
1.5
1.7
—
—
—
0
0
30
104
4.98
8.36
16.3
3.7
97.5
94.5
%
0.25
30
104
31
112
4.88
8.16
4.6
2.3
—
—
—
0
0
34
136
4.72
7.77
6.6
6.2
1.1
1.2
inr
—
9
36
15
30
6.43
7.67
4.3
4.0
1.8
0.4
%
—
6
7
10
13
9.12
7.36
1.5
1.8
4.3
19.4
ug/l
—
10
13
50
305
6.19
6.71
6.4
3.8
—
—
—
0
0
24
82
4.33
6.56
1.7
1.7
—
—
—
0
0
14
31
5.66
6.39
1.5
1.3
—
—
—
0
0
13
29
5.51
5.85
4.5
4.1
0.2
0.0
%
—
5
7
27
110
3.76
5.63
1.7
1.7
—
—
—
0
0
16
47
4.34
5.20
6.7
1.8
349.2
381.5
nmol/l
0.27
16
42
39
210
3.71
5.18
31.2
8.3
0.0
0.0
e9/l
0.00
33
167
18
61
3.85
4.81
3.4
2.7
243.8
1909.9
ng/l
0.47
13
40
38
210
3.43
4.67
7.1
2.9
0.0
0.0
estimate
—
10
40
28
130
3.27
4.58
6.5
1.9
—
—
—
0
0
37
206
3.27
4.40
10.1
4.1
0.0
0.0
estimate
0.00
11
41
22
90
3.35
4.39
5.3
2.5
—
—
—
0
0
37
207
3.24
4.35
7.3
2.9
0.0
0.0
estimate
0.00
11
40
13
37
4.26
4.34
8.8
3.9
—
—
—
0
0
27
126
3.17
4.33
20.1
8.6
—
—
—
0
0
19
72
3.46
4.26
1.7
1.4
240.0
483.1
titre
—
6
13
33
176
3.08
4.16
5.1
2.6
—
—
—
0
0
14
45
3.80
3.97
1.7
1.6
—
—
—
0
0
10
25
4.64
3.88
4.0
4.0
65.5
66.8
g/l
—
10
25
12
35
4.08
3.86
38.1
3.9
1.1
1.6
mmol/l
1.11
12
35
8
12
7.54
3.82
1.4
1.3
—
—
—
0
0
14
50
3.39
3.37
2.9
1.9
—
—
—
0
0
22
103
2.85
3.37
6.0
2.9
—
—
—
0
0
13
45
3.45
3.28
1.2
1.1
—
—
—
0
0
6
8
8.21
3.13
1.3
1.0
—
—
—
0
0
12
42
3.35
2.96
2.4
2.0
—
—
—
0
0
25
134
2.54
2.87
1.6
1.4
—
—
—
0
0
12
43
3.27
2.85
37.4
2.1
5.5
5.7
kpa
0.21
12
43
9
24
4.25
2.81
1.4
1.2
—
—
—
0
0
22
112
2.57
2.80
14.7
4.4
—
—
—
0
0
12
44
3.19
2.75
37.3
2.2
—
—
—
0
0
5
7
7.68
2.60
1.8
2.1
—
—
—
0
0
7
17
4.54
2.44
1.0
1.5
—
—
—
0
0
5
8
6.71
2.42
1.2
1.1
—
—
—
0
0
5
8
6.71
2.42
1.0
1.0
—
—
—
0
0
57
509
+∞
2.42
51.2
11.7
75.3
73.4
umol/l
0.18
57
509
9
29
3.49
2.34
9.0
7.3
128.8
124.3
g/l
—
9
29
5
9
5.96
2.26
1.0
1.4
—
—
—
0
0
7
19
4.05
2.23
2.3
6.1
—
—
—
0
0
24
139
2.26
2.22
4.9
2.9
19.2
27.7
ng/l
0.36
19
83
6
14
4.65
2.21
1.3
1.1
—
—
—
0
0
7
21
3.65
2.04
61.4
2.0
21.9
25.0
mmol/l
—
7
21
20
111
2.24
2.02
6.5
2.5
—
—
—
0
0
5
11
4.86
1.98
1.0
1.0
—
—
—
0
0
21
120
2.19
1.98
3.0
2.0
118.0
180.3
u/l
0.63
21
114
12
53
2.60
1.97
1.2
1.2
—
—
—
0
0
7
22
3.48
1.95
11.3
8.3
93.4
94.6
%
—
7
22
5
12
4.45
1.86
1.0
1.3
—
—
—
0
0
19
107
2.16
1.84
7.8
2.9
0.0
0.0
estimate
—
9
41
9
36
2.77
1.83
3.8
3.1
—
—
—
0
0
8
30
2.93
1.80
3.0
2.2
—
—
—
0
0
22
133
2.07
1.77
1.8
2.2
—
—
—
0
0
7
25
3.04
1.71
58.7
2.1
117.6
131.0
g/l
—
7
25
6
20
3.23
1.63
17.2
3.3
22.2
20.6
s
—
6
20
8
33
2.65
1.61
1.0
1.0
—
—
—
0
0
26
172
1.94
1.60
2.5
1.8
—
—
—
0
0
7
27
2.81
1.57
2.9
7.4
—
—
—
0
0
5
15
3.55
1.55
1.2
1.5
0.4
0.2
g/l
—
5
15
20
122
1.98
1.54
1.7
1.6
1.4
2.6
g/l
4.41
13
67
38
288
1.96
1.54
3.9
3.2
—
—
—
0
0
5
17
3.12
1.39
1.2
1.1
—
—
—
0
0
5
17
3.12
1.39
1.2
1.5
1.3
1.2
g/l
—
5
17
6
24
2.67
1.34
4.7
3.7
—
—
—
0
0
14
79
2.02
1.31
1.1
1.2
1.2
3.1
u/ml
—
7
34
13
205
0.53
1.18
2.1
2.3
—
—
—
0
0
8
40
2.16
1.17
53.6
1.9
4.8
5.3
kpa
—
8
40
5
21
2.51
1.11
3.6
2.2
25.3
24.0
mmol/l
—
5
21
5
22
2.39
1.05
81.6
1.9
0.7
0.8
%
—
5
22
6
29
2.19
0.92
80.8
3.7
24.0
24.7
mmol/l
—
6
29
8
43
2.00
0.92
2.0
1.4
—
—
—
0
0
21
153
1.59
0.83
3.5
1.8
85.5
95.1
pmol/l
0.82
16
80
13
84
1.71
0.80
1.5
1.3
7.9
30.3
iu/ml
—
6
27
5
23
2.28
0.78
81.6
1.9
1.8
1.6
%
—
5
23
8
51
1.66
0.64
1.5
1.2
—
—
—
0
0
5
34
1.51
0.41
1.4
1.4
—
—
—
0
0
0
18
0.00
0.40
0.0
1.1
—
—
—
0
0
13
99
1.41
0.40
5.1
3.5
—
—
—
0
0
10
75
1.40
0.33
1.5
1.4
—
—
—
0
0
0
11
0.00
0.21
0.0
1.4
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
9
83
1.10
0.07
1.0
1.6
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
9
89
1.01
0.00
1.7
1.8
—
—
—
0
0
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
115.9
—
0
5
0
7
0.00
0.00
0.0
14.0
—
769.4
—
0
7
0
7
0.00
0.00
0.0
2.9
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
0.00
0.0
15.4
—
1184.0
—
0
7
0
7
0.00
0.00
0.0
1.1
—
33.0
—
0
7
0
5
0.00
0.00
0.0
1.0
—
34.1
—
0
5
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint DRUGADVERS_ACUTE_PANCREATIT and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have DRUGADVERS_ACUTE_PANCREATIT.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: DRUGADVERS_ACUTE_PANCREATIT – Drug-induced acute pancreatitis

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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