Central nervous system disorder causing precocious puberty

E4_CENTRAL_NERVOUS_SYSTEM_DISORDER_CAUSING_PRECOCIOUS_PUBERTY

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 E22.80
  • Cause of death: ICD-10 E22.80

2 out of 7 registries used, show all original rules.

100

4. Check minimum number of events

None

100

5. Include endpoints

None

100

6. Filter based on genotype QC (FinnGen only)

82

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded (different definition than used in FinnGen).

-FinnGen-

Key figures

All Female Male
Number of individuals 82 72 10
Unadjusted period prevalence (%) 0.02 0.03 0.00
Median age at first event (years) 9.08 8.79 11.15

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
100
Matched controls
1000
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
E22.80
ICD-10 Finland
Central precocious puberty
+∞
138.5
98
*
L02AE02
ATC
leuprorelin; implant, parenteral
243.8
63.9
60
6
NK6MA
NOMESCO Finland
Measurement of bone age from hand and elbow using X-ray
11.9
31.4
41
55
Z51.80
ICD-10 Finland
Manipulation of puberty development with hormone therapy
211.2
30.5
30
*
E30.1
ICD-10 Finland
Precocious puberty
49.0
26.2
31
9
AA1CG
NOMESCO Finland
Extensive MRI examination of brain with high intensity magnet
6.2
12.5
25
51
101
Kela drug reimbursment
Anterior pituitary hypofunction
19.6
12.2
18
11
R2130
NOMESCO Finland
Counselling and guidance which enhance independent living
5.5
11.9
28
66
ZXE10
NOMESCO Finland
More than one and less than three hours
4.3
11.5
47
172
H01AC01
ATC
somatropin; parenteral
10.9
10.1
19
21
E23.00
ICD-10 Finland
Panhypopituitarism
110.0
9.6
10
*
H47.2
ICD-10 Finland
Optic atrophy
110.0
9.6
10
*
Z50.8
ICD-10 Finland
Care involving use of other rehabilitation procedures
5.7
9.5
20
42
WX404
NOMESCO Finland
Intravenous generell anesthesy
3.8
9.0
37
133
L02AE04
ATC
triptorelin; parenteral
+∞
8.4
8
*
E23.01
ICD-10 Finland
Isolated deficiency of growth hormone
14.7
8.1
13
10
Z03.5
ICD-10 Finland
Observation for other suspected cardiovascular diseases
5.1
8.1
19
44
LC2AE
NOMESCO Finland
Ultrasound examination of uterus and parametria
4.7
7.9
21
54
H03AA01
ATC
levothyroxine sodium; systemic
4.3
7.9
24
69
AA4CG
NOMESCO Finland
Extensive MRI examination of sella turcica with high intensity magnet
20.3
7.8
11
6
AAF05
NOMESCO Finland
Ventriculoperitoneal shunt
+∞
7.4
7
*
ZXA00
NOMESCO Finland
Right side
4.2
7.4
23
67
AA1DG
NOMESCO Finland
Very extensive MRI examination of brain with high intensity magnet
10.0
7.3
14
16
F82
ICD-10 Finland
Specific developmental disorder of motor function
9.4
7.1
14
17
WX408
NOMESCO Finland
General anesthesy, balanced
3.3
7.1
36
146
E30.9
ICD-10 Finland
Disorder of puberty, unspecified
74.4
6.5
7
*
ZXD10
NOMESCO Finland
Scheduled procedure
2.9
6.3
43
204
H02AB09
ATC
hydrocortisone; systemic
6.4
6.3
16
29
102
Kela drug reimbursment
Diabetes insipidus
+∞
6.3
6
*
E34.39
ICD-10 Finland
Short stature, not elsewhere classified
11.1
6.2
11
11
F83
ICD-10 Finland
Mixed specific developmental disorders
8.1
6.2
13
18

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
11
11
11.06
6.21
1.9
1.5
4.89
5.36
nmol/l
0.06
11
11
13
26
5.58
4.83
2.7
1.4
—
—
—
0
0
25
102
2.93
4.67
10.7
11.5
—
—
—
0
0
87
663
3.40
4.43
5.7
3.7
14.11
14.25
pmol/l
0.19
82
589
25
107
2.78
4.26
8.8
11.6
25.32
25.14
mmol/l
0.09
25
107
8
10
8.57
4.14
2.8
2.0
132.25
124.20
ng/l
—
8
10
23
104
2.57
3.49
6.8
10.1
24.30
23.56
mmol/l
1.10
23
104
37
208
2.24
3.47
5.3
3.5
0.48
0.16
e6/l
0.51
27
164
37
211
2.20
3.34
5.3
3.5
—
—
—
0
0
26
134
2.27
2.95
7.0
3.2
7.39
7.40
ph
—
6
20
22
106
2.38
2.90
5.3
4.5
—
—
—
0
0
15
62
2.67
2.69
1.7
1.9
—
—
—
0
0
38
241
1.93
2.46
12.7
8.8
—
—
—
0
0
12
47
2.76
2.37
1.3
1.6
—
—
—
0
0
36
229
1.89
2.29
5.5
3.5
71.26
50.96
e6/l
0.18
26
183
64
489
1.86
2.26
15.6
8.8
4.29
3.76
e9/l
0.89
56
429
6
14
4.48
2.18
2.8
1.1
91.83
184.50
pmol/l
—
6
14
16
76
2.32
2.16
13.1
12.3
0.89
0.79
mmol/l
0.47
16
70
34
216
1.87
2.15
6.5
2.7
—
—
—
0
0
6
15
4.18
2.07
4.8
4.3
44.83
52.00
%
—
6
15
6
15
4.18
2.07
4.7
4.3
2.50
2.85
e9/l
—
6
15
5
11
4.72
1.96
3.6
6.2
0.84
1.71
ug/l
—
5
11
53
395
1.73
1.92
7.2
5.6
5.86
6.12
mmol/l
0.53
48
337
23
133
1.95
1.91
2.1
1.5
1.59
1.17
mmol/l
1.59
23
118
16
81
2.16
1.87
1.7
2.7
—
—
—
0
0
44
314
1.72
1.85
3.2
3.1
5.83
6.02
ph
—
6
23
17
89
2.10
1.83
1.6
1.7
—
—
—
0
0
93
841
2.51
1.74
10.7
7.6
—
—
—
0
0
5
13
3.99
1.73
4.4
4.5
3.19
1.92
mmol/l
—
5
13
16
85
2.05
1.66
8.8
7.2
—
—
—
0
0
5
14
3.70
1.63
5.2
3.5
76.80
65.29
%
—
5
14
13
64
2.19
1.62
1.2
1.3
—
—
—
0
0
29
190
1.74
1.62
3.6
3.3
—
—
—
0
0
56
439
1.63
1.57
15.0
9.5
0.10
0.00
e9/l
0.49
43
348
26
167
1.75
1.55
3.3
4.6
0.98
1.07
inr
—
10
58
5
15
3.45
1.54
2.2
3.7
11.20
17.47
%
—
5
15
20
119
1.85
1.52
2.7
3.7
11.50
3.41
e6/l
—
10
66
40
291
1.62
1.50
6.5
4.1
66.82
85.74
e6/l
0.16
27
191
24
153
1.75
1.46
2.0
3.5
8.24
1.46
mg/l
0.52
15
100
5
18
2.87
1.30
25.4
10.6
—
—
—
0
0
18
111
1.76
1.22
1.6
2.3
7.40
15.61
ng/l
—
8
30
54
438
1.51
1.19
12.0
8.1
0.04
0.03
e9/l
0.06
46
385
54
439
1.50
1.17
12.0
8.1
0.62
0.53
e9/l
1.26
46
386
57
469
1.50
1.17
11.5
7.7
2.35
2.10
e9/l
1.58
50
423
5
20
2.58
1.16
24.4
12.1
23.40
23.43
mmol/l
—
5
20
5
20
2.58
1.16
4.6
5.1
68.78
59.86
g/l
—
5
20
60
502
1.49
1.11
3.9
2.5
1.36
1.12
mmol/l
1.90
60
480
5
21
2.45
1.10
25.2
11.3
0.96
0.91
%
—
5
21
5
21
2.45
1.10
25.2
11.3
0.56
0.59
%
—
5
21
5
21
2.45
1.10
25.2
11.3
95.96
95.08
%
—
5
21
9
45
2.10
1.08
15.8
11.5
106.67
105.29
mmol/l
—
9
45
88
804
1.79
1.07
15.2
9.4
20.97
21.77
mg/l
0.07
76
563
47
378
1.46
1.04
5.6
4.8
0.00
0.00
estimate
—
8
80
47
379
1.45
1.03
4.1
3.3
0.00
0.00
estimate
—
9
80
43
341
1.46
1.02
2.3
2.2
—
—
—
0
0
62
529
1.45
0.99
4.2
2.4
1.35
1.47
mmol/l
1.61
62
500
12
70
1.81
0.97
2.2
1.3
375.10
557.82
u/ml
0.17
12
64
15
94
1.70
0.97
11.1
7.8
4.84
4.98
kpa
0.39
15
89
6
27
2.30
0.95
1.2
1.2
—
—
—
0
0
6
27
2.30
0.95
5.5
2.7
—
—
—
0
0
54
452
1.42
0.94
14.3
8.5
0.19
0.19
e9/l
0.08
46
400
47
384
1.42
0.94
4.1
3.4
0.00
0.00
estimate
—
9
80
62
533
1.43
0.92
4.3
2.5
2.76
2.70
mmol/l
0.24
62
501
15
96
1.66
0.90
1.5
1.4
—
—
—
0
0
62
536
1.41
0.88
4.3
2.6
4.48
4.45
mmol/l
0.07
62
508
87
803
1.64
0.87
21.1
12.2
332.51
334.32
g/l
0.81
87
793
13
81
1.70
0.86
12.5
6.9
10.42
10.11
kpa
0.30
13
75
11
67
1.72
0.79
1.3
1.4
—
—
—
0
0
11
67
1.72
0.79
1.4
1.4
—
—
—
0
0
6
34
1.81
0.77
3.7
1.2
—
—
—
0
0
7
38
1.90
0.75
1.0
1.0
—
—
—
0
0
11
68
1.69
0.75
1.4
1.5
—
—
—
0
0
5
28
1.83
0.67
1.2
1.4
25.00
21.54
u/ml
—
5
28
5
29
1.76
0.64
1.8
1.8
—
—
—
0
0
9
60
1.55
0.56
2.9
2.0
—
—
—
0
0
61
548
1.29
0.56
5.8
4.0
—
—
—
0
0
9
62
1.50
0.55
1.6
1.1
—
—
—
0
0
21
163
1.36
0.54
1.7
1.6
—
—
—
0
0
10
67
1.55
0.52
6.5
3.2
—
—
—
0
0
11
76
1.50
0.50
1.2
1.5
551.09
98529839.65
pmol/l
0.49
11
68
11
76
1.50
0.50
4.2
2.7
31.83
25.08
%
0.31
11
70
47
416
1.24
0.46
13.8
8.2
—
—
—
0
0
13
96
1.41
0.44
4.3
4.9
297.23
290.12
umol/l
0.14
13
91
14
106
1.37
0.42
1.2
1.3
22.35
19.06
nmol/l
0.42
14
94
0
15
0.00
0.41
0.0
4.3
—
—
—
0
0
0
15
0.00
0.41
0.0
1.0
—
—
—
0
0
0
16
0.00
0.41
0.0
1.0
—
2.27
—
0
7
0
16
0.00
0.41
0.0
1.1
—
—
—
0
0
37
322
1.24
0.41
2.0
1.6
1.67
1.74
g/l
0.15
17
173
28
325
0.81
0.38
2.4
1.9
—
—
—
0
0
25
212
1.24
0.35
3.7
2.7
—
—
—
0
0
18
215
0.80
0.31
1.8
1.7
—
—
—
0
0
18
149
1.25
0.30
2.3
2.5
10336.14
3518.65
u/l
—
5
60
24
206
1.22
0.30
4.9
3.4
0.00
0.00
estimate
—
8
79
21
178
1.23
0.29
1.4
1.4
107.31
91.60
pmol/l
—
10
89
8
66
1.23
0.27
1.4
1.3
—
—
—
0
0
12
96
1.28
0.26
3.5
2.6
17.56
14.88
umol/l
0.31
12
88
5
38
1.33
0.23
2.8
3.9
—
—
—
0
0
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.2
—
7.43
—
0
12
0
12
0.00
0.21
0.0
8.6
—
10.07
—
0
12
0
14
0.00
0.20
0.0
1.1
—
2.40
—
0
14
11
90
1.25
0.20
3.9
2.5
2.57
2.59
g/l
0.02
11
81
12
100
1.23
0.19
2.3
1.8
—
—
—
0
0
37
342
1.13
0.19
1.7
1.8
—
—
—
0
0
29
314
0.89
0.15
2.1
1.8
—
—
—
0
0
11
95
1.18
0.12
1.8
1.4
—
—
—
0
0
10
87
1.17
0.10
1.9
2.2
—
—
—
0
0
10
87
1.17
0.10
1.6
2.2
409.40
786.41
ng/l
—
5
27
26
244
1.09
0.09
3.1
2.4
—
—
—
0
0
40
414
0.94
0.06
3.2
2.3
—
—
—
0
0
20
189
1.07
0.05
2.5
1.5
—
—
—
0
0
38
368
1.05
0.05
1.6
1.7
0.57
2.19
u/ml
—
7
74
11
118
0.92
0.03
1.4
1.7
—
—
—
0
0
23
238
0.96
0.02
1.9
1.7
—
—
—
0
0
13
128
1.02
0.00
2.5
1.7
—
—
—
0
0
15
148
1.02
0.00
1.3
1.2
—
—
—
0
0
13
127
1.03
0.00
2.5
1.7
—
—
—
0
0
13
127
1.03
0.00
2.5
1.7
—
—
—
0
0
11
115
0.95
0.00
2.5
1.7
—
—
—
0
0
10
96
1.05
0.00
2.3
2.2
—
—
—
0
0
13
126
1.04
0.00
2.5
1.7
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
0.00
0.0
1.0
—
5.56
—
0
9
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.9
—
35414.29
—
0
7
0
7
0.00
-0.00
0.0
1.1
—
319.00
—
0
7
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
7.6
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
125.57
—
0
7
0
6
0.00
-0.00
0.0
11.2
—
1.23
—
0
6
0
6
0.00
-0.00
0.0
2.5
—
3.22
—
0
6
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
3.4
—
1.50
—
0
5
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
1373.80
—
0
5
0
7
0.00
-0.00
0.0
2.3
—
5.90
—
0
7
0
6
0.00
-0.00
0.0
3.5
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
2.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
0.42
—
0
6
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded (different definition than used in FinnGen).

Relationships between endpoints

Index endpoint: E4_CENTRAL_NERVOUS_SYSTEM_DISORDER_CAUSING_PRECOCIOUS_PUBERTY – Central nervous system disorder causing precocious puberty

GWS hits: -

This endpoint is excluded (different definition than used in FinnGen).