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This is a non-core endpoint: only basic statistics are computed.

See its core counterpart C3_TRACHEA_EXALLC for full statistics.

Malignant neoplasm of trachea

C3_TRACHEA

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Cause of death: ICD-10 C33
  • Cause of death: ICD-9 1620
  • Cause of death: ICD-8 1620
  • Cancer registry: Topography ICD-O-3 C33
  • Cancer registry: Morphology ICD-O-3 ANY
  • Cancer registry: Behaviour codes 3

2 out of 7 registries used, show all original rules.

15

4. Check minimum number of events

None

15

5. Include endpoints

None

15

6. Filter based on genotype QC (FinnGen only)

15

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF9

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 15 - 11
Unadjusted period prevalence (%) 0.00 - 0.00
Median age at first event (years) 69.84 - 70.29

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
unit
cases
controls
-log10(p)
N cases
N controls
(3001122) Ferritin [Mass/volume] in Serum or Plasma
0
32
0.00
1.35
0.0
3.0
—
128.4
—
0
26
(3023368) Bacteria identified in Blood by Culture
6
28
2.88
1.06
9.3
5.1
—
—
—
0
0
(3019900) Cholesterol [Moles/volume] in Serum or Plasma
5
87
0.36
1.00
4.8
5.1
mmol/l
4.8
4.4
—
5
80
(3001308) Cholesterol in LDL [Moles/volume] in Serum or Plasma
5
87
0.36
1.00
4.8
5.9
mmol/l
3.0
2.5
—
5
77
(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma
5
87
0.36
1.00
4.4
5.1
mmol/l
1.4
1.4
—
5
76
(3018251) Fasting glucose [Moles/volume] in Serum or Plasma
5
86
0.37
0.99
5.6
5.3
mmol/l
6.4
5.9
—
5
72
(3004410) Hemoglobin A1c/Hemoglobin.total in Blood
5
85
0.38
0.98
8.8
6.2
mmol/mol
41.6
40.7
—
5
78
(3048773) Triglyceride [Moles/volume] in Serum or Plasma --fasting
5
83
0.41
0.94
3.6
4.6
mmol/l
1.3
1.3
—
5
71
(3026493) Urate [Moles/volume] in Serum or Plasma
0
27
0.00
0.87
0.0
2.8
—
373.5
—
0
20
(3012095) Magnesium [Moles/volume] in Serum or Plasma
5
23
2.74
0.86
16.2
2.3
mmol/l
0.8
0.9
—
5
23
(40768804) Tissue Pathology biopsy report
7
42
2.24
0.84
7.4
2.0
—
—
—
0
0
(3009542) Hematocrit [Volume Fraction] of Blood
5
80
0.44
0.75
41.4
18.6
%
37.4
40.5
—
5
55
(3001079) Blood group antibody screen [Presence] in Serum or Plasma
6
38
1.96
0.64
6.7
3.6
—
—
—
0
0
(3007461) Platelets [#/volume] in Blood
7
97
0.48
0.58
51.3
23.7
e9/l
270.0
244.3
—
7
90
(3026361) Erythrocytes [#/volume] in Blood
7
97
0.48
0.58
51.3
23.7
e12/l
4.0
4.4
—
7
88
(3010813) Leukocytes [#/volume] in Blood
7
97
0.48
0.58
51.3
23.6
e9/l
7.6
6.9
—
7
88
(3035941) MCH [Entitic mass]
7
97
0.48
0.58
51.1
23.6
pg
31.1
30.5
—
7
91
(3024731) MCV [Entitic volume]
7
97
0.48
0.58
51.1
23.6
fl
94.9
91.4
—
7
91
(3000963) Hemoglobin [Mass/volume] in Blood
7
97
0.48
0.58
51.3
23.7
g/l
125.7
135.0
—
7
91
(3019550) Sodium [Moles/volume] in Serum or Plasma
7
94
0.52
0.57
34.4
17.8
mmol/l
138.3
139.8
—
7
87
(3023103) Potassium [Moles/volume] in Serum or Plasma
7
94
0.52
0.57
35.0
17.4
mmol/l
4.1
4.0
—
7
87
(3006923) Alanine aminotransferase [Enzymatic activity/volume] in Serum or Plasma
7
92
0.55
0.55
18.9
12.6
u/l
26.6
25.5
—
7
87
(3020630) Protein [Mass/volume] in Serum or Plasma
0
14
0.00
0.43
0.0
2.6
—
66.2
—
0
14
(3011397) Hemoglobin [Presence] in Urine by Test strip
0
17
0.00
0.43
0.0
5.1
—
—
—
0
0
(3007164) IgA [Mass/volume] in Serum or Plasma
0
18
0.00
0.42
0.0
1.2
—
1.7
—
0
9
(3020564) Creatinine [Moles/volume] in Serum or Plasma
7
91
0.57
0.39
47.3
19.4
umol/l
76.3
84.3
—
7
91
(40761511) CBC panel - Blood by Automated count
7
91
0.57
0.39
44.9
15.0
—
—
—
0
0
(3020460) C reactive protein [Mass/volume] in Serum or Plasma
7
89
0.60
0.38
42.7
17.0
mg/l
32.4
28.8
—
7
69
(3009201) Thyrotropin [Units/volume] in Serum or Plasma
6
81
0.57
0.38
6.0
4.8
mu/l
3.2
2.0
—
6
66
(3037467) Urinalysis macro (dipstick) panel - Urine
5
69
0.59
0.38
2.4
4.2
—
—
—
0
0
(40764999) Glomerular filtration rate/1.73 sq M.predicted [Volume Rate/Area] in Serum, Plasma or Blood by Creatinine-based formula (CKD-EPI)
7
87
0.64
0.37
43.3
15.4
ml/min/173m2
82.7
78.0
—
7
66
(3013707) Erythrocyte sedimentation rate by Westergren method
5
65
0.66
0.23
3.6
5.0
mm/h
5.0
15.3
—
5
59
(3026910) Gamma glutamyl transferase [Enzymatic activity/volume] in Serum or Plasma
5
64
0.67
0.23
2.6
3.0
u/l
48.0
61.3
—
5
59
(3019060) Gas panel - Arterial blood
0
11
0.00
0.22
0.0
5.5
—
—
—
0
0
(42868674) Cholesterol in HDL/Cholesterol.total [Molar ratio] in Serum or Plasma
0
11
0.00
0.22
0.0
5.7
—
31.3
—
0
6
(3043924) Respiratory syncytial virus RNA [Identifier] in Specimen by NAA with probe detection
0
11
0.00
0.22
0.0
1.5
—
—
—
0
0
(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma
0
10
0.00
0.22
0.0
7.5
—
—
—
0
0
(3038288) Influenza virus B RNA [Presence] in Specimen by NAA with probe detection
0
13
0.00
0.21
0.0
1.5
—
—
—
0
0
(3004588) Protein electrophoresis panel - Serum or Plasma
0
13
0.00
0.21
0.0
2.2
—
—
—
0
0
(3021347) Calcium.ionized [Moles/volume] in Serum or Plasma
5
46
1.13
0.11
5.8
5.9
mmol/l
1.2
1.2
—
5
36
(3044889) 12 lead EKG panel
6
69
0.78
0.10
7.0
4.1
—
—
—
0
0
(3017446) Testosterone [Moles/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
1.5
—
11.3
—
0
6
(3028286) Albumin [Mass/volume] in Serum or Plasma by Electrophoresis
0
7
0.00
0.00
0.0
2.0
—
37.7
—
0
7
(3024889) Methemoglobin/Hemoglobin.total in Venous blood
0
6
0.00
0.00
0.0
2.2
—
0.7
—
0
6
(40761535) Cells panel - Urine sediment
0
7
0.00
0.00
0.0
2.4
—
—
—
0
0
(3019225) pH of Specimen
0
8
0.00
0.00
0.0
3.7
—
—
—
0
0
(3020961) Endomysium IgA Ab [Titer] in Serum
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3014218) Bicarbonate [Moles/volume] standard in Arterial blood
0
7
0.00
0.00
0.0
5.4
—
24.8
—
0
7
(3014007) Fractional oxyhemoglobin in Arterial blood
0
6
0.00
0.00
0.0
11.5
—
92.2
—
0
6
(3036086) Jo-1 extractable nuclear Ab [Units/volume] in Serum by Immunoassay
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(1002224) Polysomnography panel
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
(3006999) Ribonucleoprotein extractable nuclear Ab [Units/volume] in Serum
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3035995) Alkaline phosphatase [Enzymatic activity/volume] in Serum or Plasma
7
71
0.97
0.00
14.6
8.6
u/l
81.9
80.0
—
7
66
(3016293) Bicarbonate [Moles/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
6.6
—
23.3
—
0
5
(3023024) Carbon dioxide [Partial pressure] in Capillary blood
0
7
0.00
0.00
0.0
2.0
—
4.9
—
0
7
(3013139) Helicobacter pylori Ag [Presence] in Stool
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
(3037756) Immunofixation for Serum or Plasma
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
(3016251) Hemoglobin.gastrointestinal [Presence] in Stool
0
5
0.00
0.00
0.0
2.2
—
—
—
0
0
(3002434) Lupus erythematosus deoxynucleoproteins IgG Ab [Units/volume] in Serum by Immunoassay
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3025245) SCL-70 extractable nuclear Ab [Units/volume] in Serum by Immunoassay
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3004529) Oxygen [Partial pressure] adjusted to patient's actual temperature in Venous blood
0
5
0.00
0.00
0.0
3.6
—
65.3
—
0
5
(3010517) Carboxyhemoglobin/Hemoglobin.total in Venous blood
0
6
0.00
0.00
0.0
2.2
—
1.3
—
0
6
(3008230) Borrelia burgdorferi IgM Ab [Units/volume] in Serum
0
7
0.00
0.00
0.0
2.1
—
—
—
0
0
(3029338) Protein.monoclonal band 3 [Mass/volume] in Serum or Plasma by Electrophoresis
0
6
0.00
0.00
0.0
2.2
—
0.0
—
0
6
(3013826) Glucose [Moles/volume] in Serum or Plasma
6
62
0.95
0.00
5.5
3.9
mmol/l
6.4
6.7
—
6
57
(3008486) Thyroxine (T4) free [Moles/volume] in Serum or Plasma
6
62
0.95
0.00
5.2
3.9
pmol/l
13.0
14.7
—
6
55
(3035797) Protein.monoclonal band 2 [Mass/volume] in Serum or Plasma by Electrophoresis
0
7
0.00
0.00
0.0
2.0
—
0.0
—
0
7
(3017766) Complement C4 [Mass/volume] in Serum or Plasma
0
5
0.00
0.00
0.0
1.6
—
0.3
—
0
5
(36660697) Celiac disease serology panel - Serum
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
(3000620) Complement C3 [Mass/volume] in Serum or Plasma
0
6
0.00
0.00
0.0
1.7
—
1.1
—
0
6
(3023465) Gamma globulin [Mass/volume] in Serum or Plasma by Electrophoresis
0
8
0.00
0.00
0.0
1.9
—
11.4
—
0
8
(4010399)
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
(3007930) Methemoglobin/Hemoglobin.total in Blood
0
5
0.00
0.00
0.0
4.2
—
0.8
—
0
5
(3004119) Hemoglobin [Mass/volume] in Venous blood
0
6
0.00
0.00
0.0
2.7
—
140.3
—
0
6
(46235355) HIV 1 and 2 tests - Meaningful Use set
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
(3002109) Cholesterol in LDL/Cholesterol in HDL [Mass Ratio] in Serum or Plasma
0
8
0.00
0.00
0.0
2.8
—
—
—
0
0
(3014162) Mycobacterium tuberculosis DNA [Presence] in Specimen by NAA with probe detection
0
7
0.00
0.00
0.0
2.4
—
—
—
0
0
(3000991) Gas panel - Venous blood
0
9
0.00
0.00
0.0
5.6
—
—
—
0
0
(3022621) pH of Urine by Test strip
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
(3020891) Body temperature
0
6
0.00
0.00
0.0
6.7
—
—
—
0
0
(3043723) Beta 1 globulin [Mass/volume] in Serum or Plasma by Electrophoresis
0
9
0.00
0.00
0.0
2.2
—
—
—
0
0
(3013650) Neutrophils [#/volume] in Blood by Automated count
5
56
0.84
0.00
14.4
10.5
e9/l
4.5
5.0
—
5
50
(3027450) Sjogrens syndrome-B extractable nuclear Ab [Units/volume] in Serum
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
(3011960) Natriuretic peptide B [Mass/volume] in Serum or Plasma
0
7
0.00
0.00
0.0
1.6
—
121.0
—
0
7
(3029379) Protein.monoclonal band 4 [Mass/volume] in Serum or Plasma by Electrophoresis
0
6
0.00
0.00
0.0
2.2
—
0.0
—
0
6
(3007628) Bicarbonate [Moles/volume] standard in Venous blood
0
7
0.00
0.00
0.0
2.6
—
24.9
—
0
7
(3044491) Cholesterol non HDL [Mass/volume] in Serum or Plasma
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: C3_TRACHEA – Malignant neoplasm of trachea

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).