Disorders of sexual preference

F5_SEXPREF

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 F65
  • Hospital discharge: ICD-9 302[1-2]|3024|3028|3029
  • Hospital discharge: ICD-8 302
  • Hospital discharge: excluded ICD-8 3023
  • Cause of death: ICD-10 F65
  • Cause of death: ICD-9 302[1-2]|3024|3028|3029
  • Cause of death: ICD-8 302
  • Cause of death: excluded ICD-8 3023

2 out of 7 registries used, show all original rules.

82

4. Check minimum number of events

None

82

5. Include endpoints

None

82

6. Filter based on genotype QC (FinnGen only)

82

Control definitions (FinnGen only)

Control exclude
F5_PERSOBEH

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
F63-F69
Name in latin
Perturbationes praeferentiae sexualis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 921 154 755
Only index persons 675 116 559
Unadjusted period prevalence (%)
Whole population 0.02 0.00 0.02
Only index persons 0.02 0.00 0.02
Median age at first event (years)
Whole population 31.68 28.72 32.05
Only index persons 29.04 23.76 30.13

-FinnGen-

Key figures

All Female Male
Number of individuals 82 11 71
Unadjusted period prevalence (%) 0.03 0.00 0.03
Median age at first event (years) 32.88 28.29 33.59

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
77
Matched controls
768
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
F65.4
ICD-10 Finland
Paedophilia
+∞
17.3
16
*
N05AH03
ATC
olanzapine; systemic
44.1
16.7
20
6
112
Kela drug reimbursment
Severe psychotic and other severe mental disorders
19.9
16.5
25
18
30200
ICD-8 Finland
Sexual deviation, Homosexuality
+∞
12.9
12
*
30299
ICD-8 Finland
Sexual deviation, Unspecified
+∞
10.7
10
*
N03AG01
ATC
valproic acid; systemic, rectal
11.8
9.4
17
18
N06AB04
ATC
citalopram; systemic
6.0
9.2
28
67
N05AA02
ATC
levomepromazine; systemic
16.8
9.1
14
10
N06AB03
ATC
fluoxetine; oral
7.8
9.0
21
35
N05AX08
ATC
risperidone; systemic
11.9
7.9
14
14
30041
ICD-8 Finland
Neuroses, Depressiva
50.3
7.9
9
*
F61.0
ICD-10 Finland
Mixed personality disorders
88.2
7.6
8
*
30188
ICD-8 Finland
Personality disorders, Alia definita
+∞
7.4
7
*
N05CD07
ATC
temazepam; oral
6.2
7.3
20
41
N05AF03
ATC
chlorprothixene; systemic
33.5
7.3
9
*
N05AX12
ATC
aripiprazole; systemic
18.8
6.9
10
6
N05AB03
ATC
perphenazine; systemic, rectal
18.8
6.9
10
6
N05BA04
ATC
oxazepam; oral
4.5
6.8
26
78
F29
ICD-10 Finland
Unspecified nonorganic psychosis
16.1
6.6
10
7
T36
ICD-10 Finland
Poisoning by systemic antibiotics
10.7
6.6
12
13
N05AN01
ATC
lithium; oral
75.9
6.5
7
*
N05AD01
ATC
haloperidol; systemic
20.1
6.4
9
5
N05AA01
ATC
chlorpromazine; systemic, rectal
29.3
6.4
8
*
F65.9
ICD-10 Finland
Disorder of sexual preference, unspecified
+∞
6.3
6
*
E9509
ICD-8 Finland
Suicide and self-inflicted poisoning by solid or liquid substances, Other and unspecified solid and liquid substances
+∞
6.3
6
*
F65.0
ICD-10 Finland
Fetishism
+∞
6.3
6
*

Mortality – FinRegistry

Association

Association between endpoint F5_SEXPREF and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have F5_SEXPREF.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: F5_SEXPREF – Disorders of sexual preference

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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