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Burn and corrosion of other internal organs

ST19_BURN_CORROSION_OTHER_INTERNAL_ORGANS

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 T28
  • Cause of death: ICD-10 T28

2 out of 7 registries used, show all original rules.

117

4. Check minimum number of events

None

117

5. Include endpoints

None

117

6. Filter based on genotype QC (FinnGen only)

117

Control definitions (FinnGen only)

Control exclude
CD2_BENIGN_FEMALE_GEN_OTH

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
T2[6-8]
Name in latin
Combustiones et corrosiones ahiorum organorum internorum

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 117 57 60
Unadjusted period prevalence (%) 0.02 0.02 0.03
Median age at first event (years) 43.59 40.41 46.61

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
117
Matched controls
1170
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
T28.6
ICD-10 Finland
Corrosion of oesophagus
+∞
64.7
56
*
T28.5
ICD-10 Finland
Corrosion of mouth and pharynx
+∞
34.0
31
*
X69
ICD-10 Finland
Intentional self-poisoning by and exposure to other and unspecified chemicals and noxious substances
31.3
25.8
34
15
X49
ICD-10 Finland
Accidental poisoning by and exposure to other and unspecified chemicals and noxious substances
298.6
24.6
24
*
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
6.6
23.6
66
192
T28.0
ICD-10 Finland
Burn of mouth and pharynx
+∞
18.2
17
*
F32.9
ICD-10 Finland
Depressive episode, unspecified
6.1
17.2
38
86
T36
ICD-10 Finland
Poisoning by systemic antibiotics
15.6
17.0
28
23
T54.3
ICD-10 Finland
Toxic effect: Corrosive alkalis and alkali-like substances
+∞
16.0
15
*
GD1UA
NOMESCO Finland
Thorax X-ray examination outside radiological department
6.0
15.7
34
75
N05AH03
ATC
olanzapine; systemic
6.7
14.3
26
48
F10.1
ICD-10 Finland
Mental and behavioural disorders due to use of alcohol, Harmful use
6.7
14.3
26
48
N05AF03
ATC
chlorprothixene; systemic
26.2
13.4
18
8
N05AH04
ATC
quetiapine; oral
4.5
13.2
44
138
K22.2
ICD-10 Finland
Oesophageal obstruction
56.8
13.2
15
*
N03AG01
ATC
valproic acid; systemic, rectal
6.7
12.0
21
37
N05BA04
ATC
oxazepam; oral
4.0
11.5
48
175
X59
ICD-10 Finland
Exposure to unspecified factor
4.2
11.5
41
134
N05AX08
ATC
risperidone; systemic
5.3
11.2
26
60
F32.3
ICD-10 Finland
Severe depressive episode with psychotic symptoms
36.2
10.6
13
*
F32.2
ICD-10 Finland
Severe depressive episode without psychotic symptoms
5.6
10.0
21
44
ZXD05
NOMESCO Finland
Urgent procedure
3.5
9.9
52
217
WX892
NOMESCO Finland
Monitored bed care
8.2
9.9
22
32
GD1QA
NOMESCO Finland
Supine thorax X-ray examination
4.3
9.4
28
79
UJC12
NOMESCO Finland
Flexible oesophagoscopy
40.1
9.2
11
*
N06AX11
ATC
mirtazapine; oral
3.2
8.9
58
274
AA1AD
NOMESCO Finland
CT of head and brain
3.4
8.8
42
164
JDW98
NOMESCO Finland
Other transluminal endoscopic operation on stomach or duodenum
30.0
8.6
11
*
JDB10
NOMESCO Finland
Percutaneous gastrostomy
30.0
8.6
11
*
S01.0
ICD-10 Finland
Open wound of scalp
5.4
8.4
18
38
Z76.9
ICD-10 Finland
Person encountering health services in unspecified circumstances
4.8
8.4
21
51
F60.30
ICD-10 Finland
Emotionally unstable personality disorder, impulsive
13.1
8.3
14
12
N05BA01
ATC
diazepam; systemic, rectal
4.0
8.3
27
81
A02BC05
ATC
esomeprazole; systemic
3.1
8.2
61
307
112
Kela drug reimbursment
Severe psychotic and other severe mental disorders
5.0
8.0
19
44
N03AX16
ATC
[U] pregabalin
3.4
7.9
37
141
N07BB01
ATC
disulfiram; oral
8.1
7.8
17
24
S06.0
ICD-10 Finland
Concussion
4.2
7.8
23
64
Z00.4
ICD-10 Finland
General psychiatric examination, not elsewhere classified
4.1
7.4
23
66
T28.3
ICD-10 Finland
Burn of internal genitourinary organs
+∞
7.4
7
*
X58
ICD-10 Finland
Exposure to other specified factors
3.6
7.1
28
95
X44
ICD-10 Finland
Accidental poisoning by and exposure to other and unspecified drugs, medicaments and biological substances
15.0
7.0
11
8
N05CF01
ATC
zopiclone; oral
2.9
7.0
47
219
P29
ICPC
Psychological sympt/compl other
4.0
6.7
21
61
504
Kela drug reimbursment
Conditions requiring daily forced enteral nutrition
15.5
6.5
10
7
F10.00
ICD-10 Finland
Alcohol-related acute intoxication uncomplicated
12.0
6.4
11
10
WX872
NOMESCO Finland
Intensive care
7.8
6.4
14
20
A28
ICPC
Limited function/disability NOS
3.6
6.4
24
79
Z91.5
ICD-10 Finland
Personal history of self-harm
+∞
6.3
6
*
A02BC02
ATC
pantoprazole; systemic
2.9
6.3
85
560
F33.9
ICD-10 Finland
Recurrent depressive disorder, unspecified
6.7
6.2
15
25
F10.26
ICD-10 Finland
Alcohol dependence periodic alcoholism
13.5
6.2
10
8
F99
ICD-10 Finland
Mental disorder, not otherwise specified
13.5
6.2
10
8
F10.20
ICD-10 Finland
Alcohol dependence currently independent
10.9
6.2
11
11
N03AX09
ATC
lamotrigine; oral
7.1
6.1
14
22
F10.24
ICD-10 Finland
Alcohol depence active use
16.1
6.0
9
6
F60.9
ICD-10 Finland
Personality disorder, unspecified
16.1
6.0
9
6
Z53.2
ICD-10 Finland
Procedure not carried out because of patient's decision for other and unspecified reasons
16.1
6.0
9
6
F60.31
ICD-10 Finland
Emotionally unstable personality disorder, borderline condition
16.1
6.0
9
6

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
50
184
4.00
11.89
6.2
4.3
—
—
—
0
0
82
503
3.11
7.46
11.1
5.3
6.25
6.59
mmol/l
1.08
76
463
25
77
3.86
7.34
10.8
15.0
2.99
0.88
mmol/l
1.32
20
67
51
244
2.93
7.33
6.0
2.2
—
—
—
0
0
34
131
3.25
7.09
1.9
1.7
980.86
1257.40
nmol/l
1.25
29
96
17
32
6.03
6.46
8.8
13.3
26.19
23.86
mmol/l
1.13
17
32
64
366
2.65
6.28
9.8
7.9
1.21
1.22
mmol/l
0.49
58
299
62
364
2.50
5.57
15.4
14.5
1.12
1.22
inr
0.63
18
119
18
55
3.69
5.28
10.0
9.0
1.22
1.55
mmol/l
0.54
18
55
39
192
2.55
5.01
1.5
1.6
1.28
1.16
mg/l
0.07
30
149
21
77
3.11
4.65
12.5
8.4
104.05
104.06
mmol/l
0.00
21
77
49
279
2.30
4.49
2.9
3.4
2.33
2.37
mmol/l
0.84
44
240
41
219
2.34
4.33
4.2
3.9
7.41
7.41
ph
—
10
47
6
5
12.54
3.80
12.3
9.8
0.66
0.51
mmol/l
—
6
5
15
52
3.16
3.62
11.6
10.2
—
—
—
0
0
47
290
2.04
3.33
2.1
1.8
90.35
98.80
pmol/l
0.71
31
153
14
49
3.11
3.32
5.6
13.1
—
—
—
0
0
12
35
3.70
3.21
2.7
2.1
—
—
—
0
0
50
319
1.99
3.20
6.2
3.3
65.69
31.89
ng/l
0.36
39
198
12
37
3.49
3.04
16.4
24.6
—
—
—
0
0
19
83
2.54
3.03
1.5
1.7
—
—
—
0
0
24
118
2.30
2.98
1.5
1.3
—
—
—
0
0
12
38
3.40
2.95
6.7
5.0
26.25
24.08
mmol/l
0.75
12
38
25
127
2.23
2.88
1.8
1.8
—
—
—
0
0
22
107
2.30
2.80
4.3
2.6
—
—
—
0
0
12
40
3.22
2.79
14.3
11.2
0.77
0.69
%
0.25
12
40
12
40
3.22
2.79
14.3
10.6
1.73
1.57
%
0.13
12
40
20
97
2.28
2.55
3.9
1.5
—
—
—
0
0
9
27
3.52
2.45
1.2
2.7
28.53
23.88
mmol/l
—
9
27
17
79
2.35
2.38
4.4
2.3
0.21
0.23
g/l
0.39
17
72
15
67
2.42
2.29
7.6
3.8
—
—
—
0
0
7
18
4.07
2.29
9.1
2.6
5.00
4.89
kpa
—
7
18
7
18
4.07
2.29
9.1
2.6
9.34
8.50
kpa
—
7
18
30
180
1.90
2.20
1.6
1.7
—
—
—
0
0
25
144
1.94
2.06
4.4
2.9
911.22
90.56
ng/l
0.44
18
102
70
547
1.70
2.03
16.3
8.4
4.16
4.02
e9/l
0.17
63
487
37
243
1.76
2.03
5.6
3.2
—
—
—
0
0
36
236
1.76
1.98
1.9
2.1
—
—
—
0
0
58
437
1.65
1.90
8.1
5.6
—
—
—
0
0
5
12
4.30
1.84
1.6
2.2
—
—
—
0
0
5
12
4.30
1.84
7.8
1.8
1.66
1.79
mmol/l
—
5
12
5
12
4.30
1.84
2.8
1.7
—
—
—
0
0
6
18
3.45
1.77
4.5
3.3
—
—
—
0
0
18
98
1.99
1.73
2.2
1.7
—
—
—
0
0
13
62
2.23
1.73
2.6
3.4
—
—
—
0
0
7
26
2.80
1.61
21.1
4.2
—
—
—
0
0
38
268
1.62
1.56
1.7
1.5
—
—
—
0
0
11
51
2.28
1.56
11.8
2.8
—
—
—
0
0
5
15
3.43
1.54
7.4
1.5
93.22
92.21
%
—
5
15
6
21
2.95
1.52
5.8
2.0
3.77
3.94
mmol/l
—
6
21
13
68
2.03
1.39
6.2
4.1
1.20
1.23
mmol/l
0.75
13
56
12
61
2.08
1.38
16.8
2.6
—
—
—
0
0
10
47
2.23
1.38
3.1
2.0
—
4461.38
u/l
—
0
13
10
47
2.23
1.38
11.6
4.1
—
—
—
0
0
32
223
1.60
1.37
8.8
5.3
—
—
—
0
0
14
76
1.96
1.36
3.2
4.4
0.00
0.29
%
—
6
21
12
63
2.01
1.28
16.8
2.1
—
—
—
0
0
12
63
2.01
1.28
16.8
2.7
—
—
—
0
0
50
391
1.49
1.26
2.7
2.4
126.30
100.55
ug/l
0.58
45
356
36
263
1.53
1.25
3.4
2.9
17.33
281.84
e6/l
0.60
28
215
12
65
1.94
1.18
16.8
2.6
—
—
—
0
0
12
65
1.94
1.18
16.8
2.6
—
—
—
0
0
13
73
1.88
1.16
2.4
4.5
0.00
0.44
%
—
5
18
40
304
1.48
1.15
3.8
3.4
10.74
55.93
e6/l
1.80
28
223
13
77
1.77
1.00
1.2
1.1
—
—
—
0
0
73
632
1.41
0.99
5.5
3.9
—
—
—
0
0
0
29
0.00
0.99
0.0
1.5
—
0.23
—
0
29
0
28
0.00
0.99
0.0
1.2
—
—
—
0
0
0
30
0.00
0.99
0.0
1.5
—
1.18
—
0
30
104
966
1.69
0.97
32.9
11.0
20.25
19.77
mg/l
0.07
92
736
30
222
1.47
0.97
1.4
1.2
0.88
0.91
u/ml
0.03
12
60
9
51
1.83
0.97
1.2
1.2
—
—
—
0
0
0
32
0.00
0.96
0.0
1.1
—
—
—
0
0
32
241
1.45
0.95
4.1
2.5
—
—
—
0
0
12
71
1.77
0.93
3.5
4.5
0.33
0.50
%
—
6
20
107
1004
1.77
0.92
31.3
11.3
—
—
—
0
0
33
252
1.43
0.91
4.8
3.6
0.00
0.00
estimate
-0.00
11
92
13
80
1.70
0.89
3.4
4.3
0.17
0.92
%
—
6
26
72
629
1.38
0.89
6.6
3.5
—
—
—
0
0
8
46
1.79
0.84
1.4
1.2
91.63
661.89
u/ml
—
8
41
10
58
1.79
0.82
1.1
1.2
—
—
—
0
0
8
131
0.58
0.79
1.0
1.4
—
—
—
0
0
49
410
1.34
0.77
20.3
9.0
0.00
0.00
e9/l
0.71
42
338
42
344
1.34
0.76
1.8
1.9
—
—
—
0
0
5
24
2.13
0.75
1.8
1.7
—
—
—
0
0
29
229
1.35
0.65
3.4
2.7
0.78
0.25
e6/l
0.46
22
181
16
219
0.69
0.65
3.1
3.3
16.65
68.12
mg/l
2.34
11
152
27
211
1.36
0.65
6.6
3.6
1.02
1.02
kg/l
—
6
24
5
29
1.76
0.64
11.4
3.0
—
—
—
0
0
25
194
1.37
0.63
3.4
2.5
7.14
5.08
e6/l
0.53
25
176
6
37
1.65
0.56
5.7
2.2
—
—
—
0
0
10
66
1.56
0.54
1.4
1.2
117.60
174.88
iu/ml
—
5
24
18
233
0.73
0.54
2.9
3.9
1.42
9.36
mg/mmol
2.94
12
157
74
676
1.26
0.53
5.6
3.5
11.78
9.84
mm/h
0.50
68
621
28
229
1.29
0.50
3.5
2.6
—
—
—
0
0
8
119
0.65
0.48
1.4
1.5
—
—
—
0
0
52
461
1.23
0.47
4.2
3.3
0.00
0.00
estimate
-0.00
11
97
13
174
0.72
0.47
2.6
2.6
0.71
0.77
ug/l
—
6
99
5
32
1.59
0.43
5.2
3.0
0.82
0.76
%
—
5
32
0
15
0.00
0.41
0.0
1.7
—
—
—
0
0
0
17
0.00
0.41
0.0
2.1
—
—
—
0
0
5
34
1.49
0.41
1.8
2.1
—
—
—
0
0
0
19
0.00
0.39
0.0
3.3
—
51.89
—
0
19
11
145
0.73
0.37
1.5
1.8
—
—
—
0
0
33
286
1.21
0.36
3.5
3.0
—
—
—
0
0
111
1080
1.54
0.34
43.6
17.0
40.36
41.23
%
0.87
102
1026
94
903
1.21
0.30
5.6
4.0
5.92
5.82
mmol/l
0.20
88
842
23
197
1.21
0.28
1.3
1.4
1.87
2.74
g/l
1.39
15
119
22
188
1.21
0.28
4.1
3.3
—
—
—
0
0
94
905
1.20
0.27
4.6
3.7
1.51
1.31
mmol/l
1.17
88
847
51
471
1.15
0.26
4.6
3.3
0.00
0.00
estimate
-0.00
12
89
8
103
0.76
0.22
1.4
1.7
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.5
—
—
—
0
0
8
72
1.12
0.16
1.5
1.3
—
—
—
0
0
11
96
1.16
0.10
1.2
1.4
—
—
—
0
0
10
87
1.16
0.10
5.0
3.3
—
—
—
0
0
95
936
1.08
0.07
4.6
4.1
1.37
1.43
mmol/l
0.70
90
878
14
151
0.92
0.05
1.4
1.3
6.52
7.95
u/ml
—
5
61
11
100
1.11
0.05
1.3
1.4
—
—
—
0
0
39
397
0.97
0.01
2.9
2.6
—
—
—
0
0
47
464
1.02
0.00
5.0
4.5
0.00
0.00
estimate
-0.00
12
92
10
96
1.05
0.00
1.4
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
69.00
—
0
5
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
10.20
—
0
5
0
5
0.00
0.00
0.0
1.4
—
12.38
—
0
5
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
127.20
—
0
5
0
5
0.00
0.00
0.0
1.6
—
58.20
—
0
5
0
6
0.00
-0.00
0.0
3.0
—
10.95
—
0
6
7
69
1.02
-0.00
6.6
2.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.8
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
1.81
—
0
6
0
7
0.00
-0.00
0.0
2.6
—
—
—
0
0
5
53
0.94
-0.00
1.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
9.57
—
0
7
0
7
0.00
-0.00
0.0
1.6
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.5
—
5.70
—
0
6
0
7
0.00
-0.00
0.0
10.6
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.5
—
2.97
—
0
6

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: ST19_BURN_CORROSION_OTHER_INTERNAL_ORGANS – Burn and corrosion of other internal organs

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).