Congenital retinoschisis

Q17_CONGENITAL_RETINOSCHISIS

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Q14.10
  • Cause of death: ICD-10 Q14.10

2 out of 7 registries used, show all original rules.

75

4. Check minimum number of events

None

75

5. Include endpoints

None

75

6. Filter based on genotype QC (FinnGen only)

72

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded (different definition than used in FinnGen).

-FinnGen-

Key figures

All Female Male
Number of individuals 72 30 42
Unadjusted period prevalence (%) 0.02 0.01 0.02
Median age at first event (years) 56.44 58.04 55.29

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
75
Matched controls
750
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
Q14.10
ICD-10 Finland
Congenital retinoschis
+∞
107.8
75
*
H33.1
ICD-10 Finland
Retinoschisis and retinal cysts
115.3
23.3
24
*
H35.5
ICD-10 Finland
Hereditary retinal dystrophy
+∞
8.5
8
*
CKC12
NOMESCO Finland
Photocoagulation of retina
9.8
7.2
14
17

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
46
309
2.26
2.92
6.7
8.4
1.22
1.21
mmol/l
0.36
40
258
44
306
2.06
2.38
7.6
11.3
1.31
1.25
inr
0.18
18
95
28
171
2.02
2.11
5.5
5.0
—
—
—
0
0
5
10
5.27
2.10
3.2
2.7
105.60
107.50
mmol/l
—
5
10
5
10
5.27
2.10
3.2
2.7
—
—
—
0
0
5
10
5.27
2.10
3.2
2.7
4.00
4.02
mmol/l
—
5
10
40
295
1.76
1.59
8.9
5.5
0.00
0.00
estimate
—
8
62
8
33
2.59
1.59
12.1
4.9
0.79
0.66
%
—
8
33
6
21
3.01
1.54
11.5
5.8
—
—
—
0
0
51
408
1.78
1.49
5.7
4.4
—
—
—
0
0
6
22
2.87
1.46
1.2
1.1
—
—
—
0
0
5
16
3.27
1.46
5.0
4.6
7.72
6.93
mmol/l
—
5
16
26
173
1.77
1.44
6.6
4.2
—
—
—
0
0
58
486
1.85
1.40
8.5
8.3
72.50
84.62
u/l
1.97
58
464
70
632
2.61
1.40
16.7
14.5
—
—
—
0
0
5
17
3.07
1.38
5.0
4.4
1.48
1.60
mmol/l
—
5
17
40
304
1.68
1.36
5.5
4.1
0.00
0.00
estimate
—
9
56
8
34
2.51
1.34
12.1
4.8
0.65
1.29
%
—
8
34
25
171
1.69
1.24
4.9
2.9
—
—
—
0
0
5
19
2.74
1.23
1.8
1.5
1.28
1.16
g/l
—
5
19
27
189
1.67
1.23
3.5
3.9
11.12
9.91
mg/mmol
0.06
18
120
0
34
0.00
1.19
0.0
3.3
—
348.02
—
0
28
25
173
1.67
1.19
5.4
4.3
—
—
—
0
0
39
303
1.60
1.16
5.6
4.0
0.00
0.00
estimate
—
10
64
8
40
2.12
1.16
12.5
6.2
125.12
129.63
g/l
—
8
40
10
55
1.94
0.97
5.0
4.8
—
—
—
0
0
6
28
2.24
0.94
6.2
2.6
—
—
—
0
0
6
28
2.24
0.94
11.3
4.9
—
—
—
0
0
6
28
2.24
0.94
5.5
3.1
26.00
24.59
mmol/l
—
6
28
6
29
2.16
0.91
4.5
4.7
24.48
24.05
mmol/l
—
6
29
68
628
1.89
0.87
21.0
17.8
139.24
139.72
mmol/l
0.87
68
612
26
195
1.51
0.86
2.3
2.6
—
—
—
0
0
14
90
1.68
0.85
1.4
1.2
—
—
—
0
0
5
99
0.47
0.85
2.0
1.5
—
—
—
0
0
12
74
1.74
0.84
1.7
1.5
—
—
—
0
0
67
618
1.79
0.83
17.9
15.9
22.49
22.65
mg/l
0.01
56
491
11
67
1.75
0.80
1.5
1.4
—
—
—
0
0
9
55
1.72
0.77
1.3
1.3
—
—
—
0
0
68
632
1.81
0.75
21.4
17.9
3.97
4.00
mmol/l
0.34
68
614
7
40
1.83
0.73
1.4
1.6
—
—
—
0
0
7
44
1.65
0.67
5.3
1.4
—
—
—
0
0
37
309
1.39
0.67
6.8
6.6
60.50
57.28
%
0.73
37
292
13
88
1.58
0.66
1.5
2.4
2.52
2.31
g/l
1.07
13
80
8
50
1.67
0.64
2.5
2.5
5.05
7.71
ug/l
—
8
42
22
169
1.43
0.63
3.7
4.4
0.00
0.00
estimate
—
8
59
8
51
1.64
0.63
1.4
1.4
—
—
—
0
0
36
302
1.37
0.62
6.5
6.8
0.73
0.66
%
0.33
36
284
51
453
1.39
0.61
3.8
3.8
15.08
14.94
pmol/l
0.14
46
414
0
20
0.00
0.61
0.0
1.4
—
—
—
0
0
0
21
0.00
0.61
0.0
1.6
—
—
—
0
0
36
306
1.34
0.56
6.9
6.8
2.66
2.74
%
0.08
36
286
37
317
1.33
0.54
6.7
6.8
25.72
27.86
%
0.56
37
299
12
84
1.51
0.53
1.6
1.8
—
—
—
0
0
36
309
1.32
0.51
7.0
7.0
9.14
8.84
%
0.16
36
293
27
223
1.33
0.49
1.4
2.0
—
—
—
0
0
23
189
1.31
0.43
3.4
4.9
7.40
7.40
ph
—
6
38
28
237
1.29
0.42
1.7
1.9
104.93
94.69
pmol/l
0.67
17
118
0
15
0.00
0.41
0.0
1.5
—
229.50
—
0
6
0
17
0.00
0.41
0.0
1.2
—
—
—
0
0
18
144
1.33
0.40
2.5
2.2
3.21
3.14
mg/l
0.06
18
125
21
173
1.30
0.38
3.1
3.3
27.82
68.31
mg/l
1.05
13
109
35
308
1.26
0.38
7.5
7.1
—
—
—
0
0
6
43
1.43
0.36
6.2
2.9
—
7.45
—
0
7
6
44
1.39
0.35
7.3
2.1
—
—
—
0
0
7
95
0.71
0.33
4.6
7.3
0.87
1.08
mmol/l
—
7
87
13
102
1.33
0.32
1.7
2.4
14.40
12.91
umol/l
0.25
13
94
7
53
1.35
0.32
5.7
1.7
74.90
65.54
g/l
—
7
47
23
197
1.24
0.31
2.8
2.7
46.91
55.28
u/l
0.81
23
190
13
103
1.32
0.30
1.5
2.5
28.97
30.02
s
0.31
13
97
12
94
1.33
0.30
1.3
1.2
0.97
8.78
u/ml
—
6
36
15
181
0.79
0.29
3.4
2.9
—
—
—
0
0
11
86
1.33
0.28
1.5
2.5
24.79
20.74
%
0.48
11
71
19
161
1.24
0.27
1.3
1.3
—
—
—
0
0
37
337
1.19
0.27
7.3
7.4
9.90
11.14
umol/l
0.74
37
323
9
75
1.23
0.26
1.3
1.3
—
—
—
0
0
5
37
1.38
0.24
5.0
4.6
—
—
—
0
0
5
38
1.34
0.24
1.4
1.7
—
—
—
0
0
46
430
1.18
0.23
3.5
3.9
—
—
—
0
0
5
41
1.23
0.22
2.8
3.0
3.75
3.78
e9/l
—
5
33
0
11
0.00
0.21
0.0
1.8
—
—
—
0
0
0
11
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
1.9
—
—
—
0
0
0
10
0.00
0.21
0.0
2.1
—
—
—
0
0
0
12
0.00
0.21
0.0
3.3
—
6.77
—
0
12
0
12
0.00
0.21
0.0
4.8
—
67.67
—
0
12
6
47
1.30
0.21
2.0
2.1
—
—
—
0
0
25
224
1.17
0.21
3.4
3.0
—
—
—
0
0
7
59
1.21
0.18
11.7
9.5
—
—
—
0
0
63
609
1.22
0.18
5.5
5.1
2.55
2.74
mmol/l
1.09
58
554
5
48
1.04
0.09
2.4
3.2
—
—
—
0
0
6
58
1.04
0.08
1.8
2.2
20.72
10.76
g/l
—
6
52
6
58
1.04
0.08
5.5
4.4
—
—
—
0
0
5
64
0.77
0.08
1.2
1.5
—
—
—
0
0
7
82
0.84
0.07
2.1
3.1
1.57
1.79
%
—
7
75
13
141
0.91
0.06
3.3
3.2
—
—
—
0
0
16
170
0.93
0.04
2.8
2.8
369.31
6930.48
umol/l
1.03
16
145
15
148
1.02
0.00
3.3
3.1
0.52
0.84
ug/l
—
7
98
16
164
0.97
0.00
4.9
8.5
—
—
—
0
0
6
61
0.98
0.00
4.3
9.4
118.17
121.26
g/l
—
6
61
0
7
0.00
-0.00
0.0
1.6
—
32.24
—
0
7
0
5
0.00
-0.00
0.0
2.2
—
2229.00
—
0
5
0
5
0.00
-0.00
0.0
5.4
—
165.96
—
0
5
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
4.2
—
0.75
—
0
5
0
9
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
7
0.00
-0.00
0.0
11.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
410.80
—
0
5
0
6
0.00
-0.00
0.0
1.7
—
1.77
—
0
6
0
8
0.00
-0.00
0.0
12.6
—
12.86
—
0
8
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
5.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
2.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
293.43
—
0
7
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded (different definition than used in FinnGen).

Relationships between endpoints

Index endpoint: Q17_CONGENITAL_RETINOSCHISIS – Congenital retinoschisis

GWS hits: 5

This endpoint is excluded (different definition than used in FinnGen).