This is a non-core endpoint: only basic statistics are computed.
Abnormal findings in peritoneal fluid saliva
R18_ABNORMAL_FINDI_PERITONEAL_FLUID_SALIVA
No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
133 |
4. Check minimum number of eventsNone |
133 |
5. Include endpointsNone |
133 |
6. Filter based on genotype QC (FinnGen only) |
133 |
Control definitions (FinnGen only)
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF4
- Parent code in ICD-10
- R8[3-9]
- Name in latin
- Reperta abnormia in speciminibus ex organis digestoriis et cavitate abdominali
Similar endpoints
↥List of similar endpoints to
Abnormal findings in peritoneal fluid saliva
based on the number of shared cases.
Similar with more cases:
- Abnormal findings on examination of other body fluids, substances and tissues, without diagnosis
- Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 133 | 73 | 60 |
| Unadjusted period prevalence (%) | 0.03 | 0.02 | 0.03 |
| Median age at first event (years) | 55.94 | 54.77 | 57.35 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 119
- Matched controls
- 1187
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
R85.0
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, abnormal level of enzymes
+∞
48.3
43
*
R85.9
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, unspecified abnormal finding
+∞
26.0
24
*
R85.7
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, abnormal histological findings
+∞
21.5
20
*
R85.8
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, other abnormal findings
+∞
19.3
18
*
R87.6
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal cytological findings
66.1
10.8
12
*
R10.4
ICD-10 Finland
Other and unspecified abdominal pain
3.4
9.2
62
285
UJF32
NOMESCO Finland
Coloscopy
3.5
8.5
48
192
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
3.0
6.5
46
209
R85.6
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, abnormal cytological findings
+∞
6.3
6
*
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
70
377
2.81
7.92
3.1
3.0
51.46
29.14
u/l
0.62
63
358
64
330
2.81
7.86
3.1
2.4
71.07
53.54
u/l
0.90
57
312
13
34
4.13
4.66
1.5
1.4
365.71
245.49
ug/g
—
7
15
32
155
2.40
4.11
2.1
2.0
13.28
14.72
umol/l
0.46
32
140
18
68
2.90
3.74
6.5
14.6
25.72
25.13
mmol/l
0.19
18
63
24
108
2.49
3.58
4.4
11.4
5.27
5.19
kpa
0.13
24
103
24
108
2.49
3.58
4.4
11.4
10.78
11.68
kpa
0.65
24
103
70
487
1.92
3.39
7.6
7.4
1.20
1.22
mmol/l
0.92
58
419
27
132
2.31
3.36
1.9
2.0
26.27
25.29
%
0.09
22
109
19
80
2.60
3.23
2.8
2.7
58.70
60.53
ml/min/173m2
—
10
36
13
46
3.02
3.01
1.1
1.3
343.15
135.14
u/ml
0.48
13
41
24
118
2.26
2.94
3.6
4.1
5.52
10.08
ug/l
0.69
19
95
66
468
1.81
2.87
5.3
4.5
—
—
—
0
0
9
23
4.12
2.83
1.0
1.3
—
—
—
0
0
58
399
1.80
2.76
4.3
3.8
25.91
43.03
ng/l
0.95
40
260
16
71
2.42
2.45
1.4
1.5
—
—
—
0
0
19
94
2.19
2.30
1.4
2.0
296.47
376.72
nmol/l
0.93
19
86
67
500
1.69
2.28
6.5
5.2
0.00
0.00
estimate
0.00
12
98
24
131
2.02
2.27
1.5
1.4
—
—
—
0
0
16
74
2.32
2.25
8.8
7.6
9.88
7.89
mmol/l
0.93
16
68
36
227
1.80
2.22
1.5
1.3
0.68
0.95
u/ml
0.41
11
58
54
385
1.68
2.16
2.0
1.9
88.29
96.81
pmol/l
0.56
28
195
67
507
1.65
2.12
5.0
3.7
0.00
0.00
estimate
0.00
12
97
9
31
3.04
2.11
1.0
1.2
—
—
—
0
0
9
32
2.94
2.04
6.6
1.6
223.11
84.28
pmol/l
—
9
32
66
501
1.63
2.04
5.0
3.7
0.00
0.00
estimate
0.00
12
102
49
346
1.66
2.00
4.7
3.1
—
—
—
0
0
54
394
1.62
1.93
5.2
3.8
—
—
—
0
0
20
113
1.91
1.72
7.6
6.6
103.60
104.02
mmol/l
0.16
20
108
75
604
1.55
1.70
6.5
10.2
4.73
4.05
e9/l
0.94
66
524
22
129
1.85
1.70
9.5
5.5
1.00
1.02
mmol/l
0.18
22
118
13
63
2.18
1.66
2.8
2.2
5.24
4.97
kpa
0.31
13
57
14
71
2.09
1.61
3.5
4.1
1.25
1.22
mmol/l
1.18
14
66
12
57
2.21
1.60
1.5
1.2
—
—
—
0
0
6
20
3.09
1.60
1.0
1.4
—
—
—
0
0
11
51
2.26
1.55
4.3
2.9
27.18
24.77
mmol/l
1.18
11
51
12
58
2.17
1.54
4.9
2.9
130.08
128.90
g/l
0.08
12
58
40
289
1.55
1.44
5.0
3.9
19.19
12.62
mg/mmol
0.21
29
175
28
186
1.64
1.42
4.5
3.3
213.80
122.67
ng/l
0.18
20
139
26
173
1.63
1.31
3.3
2.6
1.35
1.02
e6/l
0.20
19
99
5
18
2.84
1.29
1.4
1.6
—
—
—
0
0
8
36
2.30
1.26
3.3
2.8
—
—
—
0
0
10
49
2.13
1.25
2.7
2.2
1.43
1.15
%
—
10
49
32
227
1.54
1.24
3.0
2.3
—
—
—
0
0
11
57
2.01
1.21
3.7
4.0
23.08
24.82
mmol/l
0.76
11
57
117
1078
1.71
1.19
22.7
15.3
4.00
3.97
mmol/l
0.47
112
1049
31
222
1.52
1.15
1.4
1.8
2.90
1.08
mg/l
0.72
23
185
38
285
1.47
1.13
4.1
2.9
0.28
0.25
e6/l
0.09
32
209
116
1072
1.64
1.09
22.6
15.2
139.26
139.81
mmol/l
1.45
111
1044
9
47
1.98
1.04
1.3
1.3
—
—
—
0
0
9
48
1.94
1.03
4.7
3.4
47.03
53.68
%
—
9
48
114
1056
1.56
0.98
20.4
13.4
23.39
22.81
mg/l
0.07
94
809
15
94
1.67
0.95
4.1
3.4
—
—
—
0
0
6
28
2.20
0.93
1.0
1.5
0.26
0.23
g/l
—
6
28
6
28
2.20
0.93
1.0
1.6
1.39
1.10
g/l
—
6
28
17
112
1.59
0.90
2.0
2.0
—
—
—
0
0
104
957
1.40
0.82
18.9
14.4
39.67
40.20
%
0.23
73
726
6
33
1.86
0.80
2.2
1.5
—
—
—
0
0
0
24
0.00
0.80
0.0
1.1
—
—
—
0
0
9
55
1.68
0.75
1.0
1.0
—
—
—
0
0
5
24
2.12
0.75
1.2
1.5
—
—
—
0
0
5
25
2.04
0.73
1.0
1.8
—
—
—
0
0
27
206
1.39
0.73
1.9
1.5
—
—
—
0
0
7
118
0.57
0.72
1.9
1.8
—
—
—
0
0
17
120
1.48
0.68
2.0
1.7
1.58
1.53
%
0.11
17
106
22
165
1.40
0.66
3.7
2.7
5.09
2.82
e6/l
0.42
15
91
11
71
1.60
0.64
2.7
2.2
2.52
5.70
ug/l
2.03
11
65
5
30
1.69
0.62
1.0
1.2
—
—
—
0
0
5
30
1.69
0.62
1.0
1.2
—
—
—
0
0
21
161
1.36
0.56
2.2
2.0
—
—
—
0
0
75
679
1.24
0.56
3.4
3.2
—
—
—
0
0
14
100
1.45
0.54
1.9
1.9
—
—
—
0
0
32
263
1.29
0.54
5.4
4.0
22.59
22.86
%
0.03
22
113
16
120
1.38
0.49
2.0
1.8
—
—
—
0
0
32
269
1.25
0.45
6.8
3.6
0.00
0.00
estimate
—
10
92
93
982
0.82
0.42
6.7
5.4
41.74
39.86
mmol/mol
0.86
88
931
5
33
1.53
0.42
1.4
2.5
—
—
—
0
0
0
17
0.00
0.41
0.0
1.6
—
—
—
0
0
15
116
1.33
0.39
2.2
1.7
—
—
—
0
0
107
1027
1.21
0.34
4.3
4.3
6.17
5.97
mmol/l
0.64
100
950
101
1049
0.85
0.30
4.2
4.1
1.47
1.48
mmol/l
0.11
94
979
22
187
1.21
0.29
1.2
1.3
37.93
9.04
u/ml
—
7
77
98
1017
0.86
0.27
3.8
3.8
1.34
1.29
mmol/l
0.24
91
945
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
1.0
—
545.17
—
0
6
0
11
0.00
0.21
0.0
1.0
—
37.83
—
0
6
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
2.0
—
3.50
—
0
10
0
12
0.00
0.21
0.0
3.7
—
—
—
0
0
9
110
0.81
0.21
15.3
7.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.5
—
—
—
0
0
0
13
0.00
0.21
0.0
1.3
—
—
—
0
0
21
185
1.16
0.19
1.3
1.3
149.24
34.03
iu/ml
—
7
71
30
276
1.11
0.15
2.0
1.7
1.50
1.35
mmol/l
0.48
24
237
101
986
1.10
0.14
18.4
12.1
78.46
82.31
ml/min/173m2
1.05
84
811
109
1069
1.11
0.13
4.9
4.7
2.64
2.80
mmol/l
1.17
102
996
5
47
1.07
0.09
2.8
1.6
—
—
—
0
0
105
1051
1.00
0.00
4.3
4.2
4.57
4.74
mmol/l
0.86
100
985
0
9
0.00
0.00
0.0
1.8
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
0
6
0.00
0.00
0.0
2.5
—
—
—
0
0
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
3.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
(3016894) Varicella zoster virus DNA [Presence] in Cerebral spinal fluid by NAA with probe detection
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
0.00
0.0
2.4
—
—
—
0
0
0
5
0.00
0.00
0.0
2.4
—
—
—
0
0
0
6
0.00
0.00
0.0
2.5
—
—
—
0
0
0
6
0.00
0.00
0.0
2.5
—
—
—
0
0
0
8
0.00
0.00
0.0
1.9
—
—
—
0
0
0
7
0.00
0.00
0.0
2.0
—
1.30
—
0
7
0
8
0.00
0.00
0.0
4.5
—
—
—
0
0
0
5
0.00
0.00
0.0
2.4
—
—
—
0
0
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
0.00
0.0
3.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
895.17
—
0
6
0
8
0.00
0.00
0.0
4.5
—
—
—
0
0
0
6
0.00
0.00
0.0
2.5
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: R18_ABNORMAL_FINDI_PERITONEAL_FLUID_SALIVA – Abnormal findings in peritoneal fluid saliva
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).