This is a non-core endpoint: only basic statistics are computed.
Abnormal findings in peritoneal fluid saliva
R18_ABNORMAL_FINDI_PERITONEAL_FLUID_SALIVA
No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
519972 |
1. Apply sex-specific ruleNone |
519972 |
2. Check conditionsNone |
519972 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
140 |
4. Check minimum number of eventsNone |
140 |
5. Include endpointsNone |
140 |
6. Filter based on genotype QC (FinnGen only) |
133 |
Control definitions (FinnGen only)
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF4
- Parent code in ICD-10
- R8[3-9]
- Name in latin
- Reperta abnormia in speciminibus ex organis digestoriis et cavitate abdominali
Similar endpoints
↥List of similar endpoints to
Abnormal findings in peritoneal fluid saliva
based on the number of shared cases.
Similar with more cases:
- Abnormal findings on examination of other body fluids, substances and tissues, without diagnosis
- Symptoms, signs and abnormal clinical and laboratory findings, not elsewhere classified
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 133 | 74 | 59 |
| Unadjusted period prevalence (%) | 0.03 | 0.03 | 0.03 |
| Median age at first event (years) | 57.15 | 55.56 | 59.15 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 140
- Matched controls
- 1400
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
R85.0
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, abnormal level of enzymes
+∞
50.0
45
*
R85.9
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, unspecified abnormal finding
+∞
32.6
30
*
R85.8
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, other abnormal findings
+∞
24.7
23
*
R85.7
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, abnormal histological findings
+∞
23.6
22
*
UJF32
NOMESCO Finland
Coloscopy
4.1
14.8
62
228
R10.4
ICD-10 Finland
Other and unspecified abdominal pain
3.8
13.9
76
332
R87.6
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal cytological findings
55.5
13.1
15
*
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
3.3
10.1
56
237
R85.6
ICD-10 Finland
Abnormal findings in specimens from digestive organs and abdominal cavity, abnormal cytological findings
+∞
9.5
9
*
ULA02
NOMESCO Finland
Kolposcopy
10.2
7.5
14
15
Z01.8
ICD-10 Finland
Other specified special examinations
3.0
7.4
42
177
JN3AD
NOMESCO Finland
Abdominal CT examination
3.6
7.0
25
79
JN3CD
NOMESCO Finland
Abdominal CT examination both without and with contrast
10.0
6.4
12
13
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
76
398
2.99
9.31
3.5
2.9
51.83
29.12
u/l
0.71
69
378
69
349
2.93
8.92
3.1
2.4
69.35
53.07
u/l
0.91
62
331
35
165
2.49
4.77
2.3
2.0
13.60
14.99
umol/l
0.46
35
151
27
112
2.75
4.74
4.6
11.3
5.27
5.17
kpa
0.18
27
107
27
112
2.75
4.74
4.6
11.3
10.96
11.85
kpa
0.64
27
107
14
34
4.46
4.35
1.6
1.4
337.75
245.49
ug/g
—
8
15
72
475
2.06
4.26
21.8
10.9
1.39
1.23
inr
0.46
22
138
76
513
2.05
4.21
7.6
7.3
1.20
1.22
mmol/l
1.38
64
447
30
141
2.44
4.08
2.1
2.0
25.45
25.85
%
0.04
24
117
26
124
2.35
3.41
4.0
4.2
5.28
9.71
ug/l
0.71
20
100
71
495
1.88
3.33
3.3
2.7
—
—
—
0
0
18
73
2.68
3.28
1.4
1.5
—
—
—
0
0
62
418
1.87
3.20
4.2
3.7
25.48
41.47
ng/l
0.91
41
273
14
50
3.00
3.19
1.1
1.2
319.14
134.13
u/ml
0.45
14
45
10
25
4.22
3.15
1.0
1.3
—
—
—
0
0
40
242
1.91
2.83
1.4
1.3
0.65
0.92
u/ml
0.48
12
67
27
142
2.12
2.80
1.5
1.4
—
—
—
0
0
19
87
2.37
2.72
2.8
2.6
58.70
61.38
ml/min/173m2
—
10
40
20
95
2.29
2.64
1.4
2.0
293.85
375.75
nmol/l
1.02
20
87
10
31
3.39
2.57
1.2
1.2
—
—
—
0
0
52
362
1.69
2.25
4.4
3.1
—
—
—
0
0
70
530
1.64
2.18
6.4
5.2
0.00
0.00
estimate
-0.00
12
104
70
532
1.63
2.14
4.9
3.7
0.00
0.00
estimate
-0.00
13
114
16
77
2.22
2.06
8.8
7.6
9.88
7.77
mmol/l
1.02
16
71
70
538
1.60
2.01
5.0
3.7
0.00
0.00
estimate
-0.00
12
103
56
408
1.62
2.00
1.9
1.9
87.97
96.25
pmol/l
0.56
29
204
57
418
1.61
1.98
5.2
3.8
—
—
—
0
0
31
193
1.78
1.97
4.4
3.3
187.26
119.82
ng/l
0.15
23
143
13
59
2.33
1.91
3.6
4.1
23.22
24.92
mmol/l
0.80
13
59
18
95
2.03
1.85
3.9
3.3
—
—
—
0
0
35
230
1.70
1.84
1.3
1.8
2.79
1.07
mg/l
0.71
24
190
12
55
2.29
1.73
4.0
2.8
27.14
24.61
mmol/l
1.41
12
55
23
137
1.81
1.68
9.1
5.5
0.98
1.03
mmol/l
0.37
23
125
13
63
2.17
1.65
4.6
2.9
130.85
128.06
g/l
0.23
13
63
79
643
1.52
1.65
6.5
10.0
4.72
3.99
e9/l
1.06
70
560
6
20
3.09
1.60
1.0
1.4
—
—
—
0
0
12
58
2.17
1.54
1.5
1.2
—
—
—
0
0
28
183
1.66
1.49
3.3
2.6
1.28
0.99
e6/l
0.19
20
106
14
75
1.96
1.40
3.5
4.1
1.25
1.22
mmol/l
1.14
14
70
34
240
1.55
1.33
3.0
2.2
—
—
—
0
0
124
1140
1.77
1.33
22.9
15.1
4.00
3.98
mmol/l
0.33
119
1109
5
18
2.84
1.29
1.4
1.6
—
—
—
0
0
8
36
2.29
1.26
3.3
2.8
—
—
—
0
0
40
297
1.49
1.24
4.1
3.0
0.26
0.23
e6/l
0.08
34
220
123
1134
1.70
1.22
22.7
15.0
139.31
139.82
mmol/l
1.38
118
1104
19
122
1.64
1.09
2.1
2.0
—
—
—
0
0
10
52
1.99
1.09
4.3
3.2
48.51
52.63
%
—
10
52
121
1120
1.59
1.07
20.3
13.2
24.07
22.45
mg/l
0.24
100
863
10
53
1.96
1.04
2.7
2.3
1.43
1.13
%
—
10
53
40
307
1.42
1.04
4.9
3.7
19.19
11.86
mg/mmol
0.24
29
188
10
54
1.92
0.99
1.3
1.3
—
—
—
0
0
7
36
1.99
0.98
3.4
5.0
—
1.61
—
0
5
19
126
1.59
0.97
2.6
1.7
1.62
1.56
%
0.15
19
110
6
28
2.19
0.92
1.0
1.5
1.39
1.11
g/l
—
6
28
6
28
2.19
0.92
1.0
1.5
0.26
0.23
g/l
—
6
28
24
174
1.46
0.84
3.7
2.7
5.46
2.68
e6/l
0.59
16
97
7
121
0.56
0.82
1.9
1.7
—
—
—
0
0
6
33
1.85
0.80
1.0
1.2
—
—
—
0
0
6
33
1.85
0.80
1.0
1.2
—
—
—
0
0
6
34
1.80
0.77
2.2
1.5
—
—
—
0
0
5
24
2.12
0.75
1.2
1.5
—
—
—
0
0
16
109
1.53
0.75
1.9
1.9
—
—
—
0
0
9
57
1.62
0.73
1.0
1.0
—
—
—
0
0
5
27
1.88
0.69
1.0
1.8
—
—
—
0
0
28
218
1.36
0.67
1.9
1.6
—
—
—
0
0
5
28
1.81
0.67
1.0
1.2
—
—
—
0
0
34
275
1.31
0.64
5.4
3.9
23.83
22.79
%
0.14
23
119
79
716
1.24
0.57
3.5
3.2
—
—
—
0
0
25
200
1.30
0.51
1.2
1.3
33.33
8.33
u/ml
—
8
85
114
1083
1.28
0.50
4.3
4.3
6.13
5.96
mmol/l
0.56
107
1002
34
285
1.25
0.49
6.9
3.5
0.00
0.00
estimate
—
10
98
21
167
1.30
0.45
2.2
1.9
—
—
—
0
0
16
122
1.35
0.44
2.0
1.8
—
—
—
0
0
106
1109
0.82
0.41
4.3
4.2
1.48
1.49
mmol/l
0.09
99
1036
0
17
0.00
0.41
0.0
1.2
—
—
—
0
0
0
18
0.00
0.40
0.0
1.6
—
—
—
0
0
24
199
1.25
0.38
1.4
1.3
149.24
33.19
iu/ml
—
7
74
128
1243
1.35
0.38
29.3
19.5
39.81
40.38
%
0.48
117
1170
15
118
1.30
0.35
2.2
1.7
—
—
—
0
0
104
1076
0.87
0.25
3.9
3.8
1.32
1.28
mmol/l
0.19
97
1001
100
1037
0.88
0.25
6.9
5.3
41.53
39.78
mmol/mol
0.80
95
984
5
37
1.36
0.24
1.4
2.3
—
—
—
0
0
5
39
1.29
0.23
1.2
1.7
—
—
—
0
0
0
11
0.00
0.21
0.0
2.2
—
—
—
0
0
0
11
0.00
0.21
0.0
1.9
—
3.51
—
0
11
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.0
—
36.29
—
0
7
0
12
0.00
0.21
0.0
3.7
—
—
—
0
0
0
12
0.00
0.21
0.0
1.0
—
541.57
—
0
7
0
14
0.00
0.20
0.0
1.6
—
—
—
0
0
115
1128
1.11
0.13
4.9
4.7
2.64
2.81
mmol/l
1.25
108
1053
10
117
0.84
0.13
14.0
7.1
—
—
—
0
0
31
288
1.10
0.13
2.0
1.7
1.50
1.34
mmol/l
0.49
24
247
31
291
1.08
0.10
2.5
2.7
332.65
9480.83
umol/l
2.07
26
258
21
203
1.04
0.01
2.5
2.7
0.70
0.73
ug/l
0.10
16
133
106
1053
1.03
0.01
18.8
12.0
79.33
82.45
ml/min/173m2
0.77
87
864
111
1111
1.00
0.00
4.4
4.3
4.59
4.74
mmol/l
0.83
106
1042
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
(3016894) Varicella zoster virus DNA [Presence] in Cerebral spinal fluid by NAA with probe detection
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
2.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.0
—
1.30
—
0
7
5
49
1.02
-0.00
2.0
1.8
—
—
—
0
0
0
5
0.00
-0.00
0.0
2.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
5
52
0.96
-0.00
2.8
1.6
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
8
0.00
-0.00
0.0
4.5
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.5
—
7.19
—
0
8
0
6
0.00
-0.00
0.0
1.3
—
895.17
—
0
6
0
5
0.00
-0.00
0.0
2.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
3.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
3.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.5
—
—
—
0
0
0
8
0.00
-0.00
0.0
4.5
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.5
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: R18_ABNORMAL_FINDI_PERITONEAL_FLUID_SALIVA – Abnormal findings in peritoneal fluid saliva
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).