No definition available.
Human immunodeficiency virus [HIV] disease resulting in infectious and parasitic diseases
AB1_HIV_INFECT_PARASITES_WIDE
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
519972 |
1. Apply sex-specific ruleNone |
519972 |
2. Check conditionsNone |
519972 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
3 out of 7 registries used, show all original rules. |
107 |
4. Check minimum number of eventsNone |
107 |
5. Include endpointsNone |
107 |
6. Filter based on genotype QC (FinnGen only) |
92 |
Control definitions (FinnGen only)
- Control exclude
- AB1_HIV
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF13
Similar endpoints
↥List of similar endpoints to
Human immunodeficiency virus [HIV] disease resulting in infectious and parasitic diseases
based on the number of shared cases.
Similar with more cases:
- Certain infectious and parasitic diseases
- Any operation in hilmo
- Any event in hilmo or specialist outpatient
- Any prescribed medicine buy
Similar with less cases:
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 92 | 25 | 67 |
| Unadjusted period prevalence (%) | 0.02 | 0.01 | 0.03 |
| Median age at first event (years) | 49.31 | 57.48 | 46.26 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
No data
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 107
- Matched controls
- 1070
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
WW200
NOMESCO Finland
Immunization
160.1
131.7
69
12
B23.1
ICD-10 Finland
HIV disease resulting in (persistent) generalized lymphadenopathy
+∞
88.1
72
*
WYA30
NOMESCO Finland
Treatment of a patient needing special arrangements
30.7
69.2
56
37
B24
ICD-10 Finland
Unspecified human immunodeficiency virus [HIV] disease
+∞
66.8
57
*
B23.8
ICD-10 Finland
HIV disease resulting in other specified conditions
+∞
55.0
48
*
B20.6
ICD-10 Finland
HIV disease resulting in Pneumocystis jirovecii pneumonia
+∞
35.4
32
*
Z11.3
ICD-10 Finland
Special screening examination for infections with a predominantly sexual mode of transmission
12.2
26.0
30
33
B20.9
ICD-10 Finland
HIV disease resulting in unspecified infectious or parasitic disease
+∞
23.8
22
*
Z3231
NOMESCO Finland
Registered nurse
6.7
22.0
63
188
Z21
ICD-10 Finland
Asymptomatic human immunodeficiency virus [HIV] infection status
+∞
21.6
20
*
Z25.1
ICD-10 Finland
Need for immunization against influenza
20.4
19.4
29
19
GD1AA
NOMESCO Finland
Thorax X-ray examination
6.0
17.5
76
311
Z2221
NOMESCO Finland
Medical doctor
5.3
16.8
58
195
B20.4
ICD-10 Finland
HIV disease resulting in candidiasis
+∞
14.9
14
*
B20.1
ICD-10 Finland
HIV disease resulting in other bacterial infections
+∞
14.9
14
*
J18.9
ICD-10 Finland
Pneumonia, unspecified
5.0
14.7
46
140
B20.0
ICD-10 Finland
HIV disease resulting in mycobacterial infection
+∞
13.8
13
*
B23.0
ICD-10 Finland
Acute HIV infection syndrome
+∞
11.7
11
*
B20.3
ICD-10 Finland
HIV disease resulting in other viral infections
+∞
11.7
11
*
JN1AE
NOMESCO Finland
Ultrasound examination of upper part of abdomen
5.9
11.6
24
50
Z73.3
ICD-10 Finland
Stress, not elsewhere classified
24.6
11.0
15
7
IAZ97
NOMESCO Finland
Psychiatric consultation in another specialty
22.7
10.1
14
7
F32.9
ICD-10 Finland
Depressive episode, unspecified
4.9
10.0
26
66
Z2446
NOMESCO Finland
Social worker
5.8
9.8
20
41
R4110
NOMESCO Finland
Physiotherapy
3.4
8.8
47
198
XLD00
NOMESCO Finland
Sytologyspecimen from mouth of uterus
5.4
8.7
19
41
J05AB11
ATC
valaciclovir; oral
4.4
8.6
25
69
N06AB04
ATC
citalopram; systemic
3.7
8.5
34
119
QAJ99
NOMESCO Finland
Other aesthetic operations on skin of head or neck
+∞
8.4
8
*
B20.7
ICD-10 Finland
HIV disease resulting in multiple infections
+∞
8.4
8
*
JN4BD
NOMESCO Finland
Extensive body CT
4.8
8.3
21
52
WX110, ,
SPAT
5.0
7.6
18
42
EB1AA, ,
SPAT
5.0
7.3
17
39
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
4.1
7.2
22
63
TQX10
NOMESCO Finland
Biopsy of skin and subcutaneous tissue
4.7
7.1
18
44
XF400
NOMESCO Finland
ECG with 12 standard connections
3.5
7.1
29
102
Z3226
NOMESCO Finland
Physiotherapist
3.4
6.9
31
115
K08.1
ICD-10 Finland
Loss of teeth due to accident, extraction or local periodontal disease
4.4
6.9
19
50
WYA30, ,
SPAT
42.9
6.9
8
*
A56.3
ICD-10 Finland
Chlamydial infection of anus and rectum
74.1
6.5
7
*
TLC02
NOMESCO Finland
Simple extraction of IUD
28.5
6.3
8
*
A54.0
ICD-10 Finland
Gonococcal infection of lower genitourinary tract without periurethral or accessory gland abscess
+∞
6.3
6
*
B20.2
ICD-10 Finland
HIV disease resulting in cytomegaloviral disease
+∞
6.3
6
*
OAB43, ,
SPAT
0.2
6.3
6
269
F43.22
ICD-10 Finland
Adaptation disorder with mixed anxiety and depression
8.9
6.0
12
15
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
86
5
842.16
102.70
16.8
1.2
11116.05
—
u/ml
—
57
0
60
71
17.96
52.40
2.5
2.6
30.20
26.42
u/l
0.61
60
59
72
223
7.81
24.85
2.2
1.8
1.34
1.51
mmol/l
0.87
72
194
30
38
10.58
23.41
3.6
2.4
—
—
—
0
0
28
34
10.80
22.48
3.6
2.2
—
—
—
0
0
99
496
14.30
21.80
20.8
10.7
3.26
4.20
e9/l
6.32
94
431
84
336
7.98
21.06
5.5
5.7
37.93
36.32
g/l
1.87
84
318
86
408
6.64
16.13
4.2
3.2
0.00
0.01
estimate
0.49
11
71
86
414
6.49
15.67
7.5
4.2
0.00
0.00
estimate
—
10
68
86
422
6.29
15.08
4.2
3.1
0.00
0.00
estimate
—
8
64
35
89
5.36
13.77
3.1
1.9
—
—
—
0
0
37
99
5.18
13.71
3.5
2.1
—
—
—
0
0
56
222
4.19
12.27
4.8
2.9
0.12
0.34
e6/l
1.22
38
166
15
5
34.46
12.01
1.1
1.0
—
—
—
0
0
88
496
5.36
11.52
6.4
4.9
6.34
6.80
mmol/l
1.35
88
468
37
122
4.11
10.21
4.3
2.7
0.82
1.01
e6/l
0.10
17
64
60
276
3.67
10.10
4.7
3.3
—
—
—
0
0
9
0
+∞
9.51
4.9
0.0
—
—
—
0
0
38
135
3.81
9.34
4.2
2.6
0.66
0.83
e6/l
0.15
18
77
18
22
9.60
9.02
4.1
10.2
7539.40
217.60
iu/ml
—
5
5
16
24
7.64
7.14
2.1
1.4
—
—
—
0
0
11
8
15.13
7.06
5.0
3.1
—
—
—
0
0
17
29
6.76
6.96
1.5
1.5
—
—
—
0
0
16
27
6.77
6.61
1.3
1.1
—
—
—
0
0
10
7
15.57
6.54
4.3
3.1
—
—
—
0
0
17
32
6.11
6.49
1.2
1.4
179.00
279.62
miu/ml
—
6
19
12
13
10.23
6.48
2.7
1.3
—
—
—
0
0
15
25
6.79
6.27
3.9
2.5
—
—
—
0
0
12
17
7.80
5.61
1.2
1.4
—
—
—
0
0
14
26
6.03
5.45
1.3
1.2
1.44
0.14
iu/ml
—
7
5
63
382
2.58
5.39
5.3
7.5
1.20
1.21
mmol/l
0.30
51
336
20
68
3.39
5.03
3.3
2.4
71.70
67.50
ml/min/173m2
—
10
32
23
86
3.13
4.97
1.8
1.8
—
—
—
0
0
28
119
2.83
4.84
1.7
1.9
—
—
—
0
0
23
90
2.98
4.59
1.8
1.8
—
—
—
0
0
49
288
2.29
4.21
1.8
1.8
88.96
89.60
pmol/l
0.04
28
149
10
18
6.01
4.08
4.0
1.4
—
—
—
0
0
7
7
10.58
4.07
1.3
2.0
—
—
—
0
0
96
784
3.18
3.53
33.3
16.6
13.54
14.93
%
6.94
96
775
15
53
3.13
3.52
1.3
1.6
—
—
—
0
0
8
16
5.31
3.11
1.1
1.8
—
—
—
0
0
8
16
5.31
3.11
1.1
1.8
—
—
—
0
0
18
77
2.61
3.01
2.2
2.7
—
—
—
0
0
5
5
10.40
3.01
1.4
1.6
1557.40
504.80
u/ml
—
5
5
7
13
5.68
2.92
5.3
4.6
47.57
55.23
%
—
7
13
101
894
3.31
2.74
21.6
12.9
20.33
22.00
mg/l
0.27
90
689
12
45
2.88
2.55
6.5
8.5
25.33
25.06
mmol/l
0.09
12
45
6
12
5.22
2.43
1.0
1.2
—
—
—
0
0
31
183
1.98
2.43
2.2
2.3
—
—
—
0
0
98
860
2.66
2.42
25.1
11.7
83.14
86.52
ml/min/173m2
0.93
91
711
18
317
0.48
2.14
2.5
3.6
15.89
54.05
ng/l
—
9
201
27
159
1.93
2.11
3.7
3.3
16.65
252.36
ng/l
2.05
17
124
7
21
3.49
2.00
1.7
2.9
3.81
3.36
g/l
—
7
21
8
28
3.00
1.90
1.0
1.1
—
—
—
0
0
7
25
2.92
1.68
1.1
1.2
—
—
—
0
0
5
14
3.69
1.63
1.4
1.1
—
—
—
0
0
6
20
3.11
1.60
1.0
1.1
—
—
—
0
0
21
128
1.80
1.47
2.3
2.2
12.31
14.40
umol/l
0.60
21
119
16
91
1.89
1.38
1.8
1.4
—
—
—
0
0
36
260
1.58
1.35
2.3
2.2
118.11
208.79
u/l
1.85
36
252
6
24
2.59
1.32
1.0
2.1
101.83
86.17
%
—
6
24
22
322
0.60
1.30
5.7
3.1
—
—
—
0
0
48
375
1.51
1.25
15.5
12.8
1.22
1.28
inr
—
10
108
6
26
2.38
1.20
1.2
2.4
—
—
—
0
0
5
20
2.57
1.16
1.4
1.5
—
—
—
0
0
48
384
1.45
1.08
2.7
2.6
—
—
—
0
0
5
22
2.33
1.04
1.2
2.0
—
—
—
0
0
11
63
1.83
0.94
1.7
2.7
0.20
0.22
g/l
0.29
11
55
6
31
1.99
0.86
1.3
1.5
2.05
1.45
mg/l
—
6
23
15
101
1.56
0.75
8.3
7.9
105.33
104.29
mmol/l
0.49
15
101
5
28
1.82
0.67
1.0
1.1
—
—
—
0
0
8
50
1.65
0.63
9.3
10.7
1.37
1.82
%
—
8
50
29
352
0.76
0.58
3.4
3.8
22.53
21.96
%
—
6
131
6
36
1.71
0.58
1.0
2.9
—
—
—
0
0
6
37
1.66
0.56
1.0
1.4
—
—
—
0
0
68
620
1.27
0.51
3.6
2.9
—
—
—
0
0
65
707
0.79
0.50
4.8
3.2
70.71
52.57
u/l
0.49
59
678
7
49
1.46
0.47
10.4
10.9
0.69
0.65
%
—
7
49
28
233
1.27
0.45
4.5
4.2
18.76
8.39
mg/mmol
0.47
22
167
12
88
1.41
0.42
1.6
2.8
321.42
390.43
nmol/l
0.74
12
79
9
66
1.40
0.39
1.0
1.9
52.11
39.39
nmol/l
—
9
66
6
45
1.35
0.34
1.8
1.2
—
—
—
0
0
23
260
0.85
0.22
2.6
2.6
0.58
0.70
ug/l
0.55
15
132
0
11
0.00
0.21
0.0
4.5
—
2158.02
—
0
11
0
10
0.00
0.21
0.0
3.2
—
—
—
0
0
0
12
0.00
0.21
0.0
1.0
—
1.14
—
0
7
0
13
0.00
0.21
0.0
1.7
—
—
—
0
0
0
14
0.00
0.20
0.0
1.1
—
—
—
0
0
16
152
1.06
0.02
1.4
1.5
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
9.00
—
0
5
0
9
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.8
—
238.83
—
0
6
0
7
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
12.84
—
0
5
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
8
0.00
-0.00
0.0
5.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
(40770918) von Willebrand factor (vWf).activity actual/normal in Platelet poor plasma by Immunoassay
0
6
0.00
-0.00
0.0
2.8
—
116.17
—
0
6
0
6
0.00
-0.00
0.0
3.2
—
106.33
—
0
6
7
75
0.93
-0.00
3.4
4.4
2.16
66.60
ug/l
—
7
60
0
5
0.00
-0.00
0.0
3.4
—
199.34
—
0
5
0
8
0.00
-0.00
0.0
2.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
206.40
—
0
5
(3011547) Coagulation factor VII activity actual/normal in Platelet poor plasma by Coagulation assay
0
5
0.00
-0.00
0.0
1.0
—
128.00
—
0
5
0
7
0.00
-0.00
0.0
1.4
—
13.43
—
0
7
0
8
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
5.4
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: AB1_HIV_INFECT_PARASITES_WIDE – Human immunodeficiency virus [HIV] disease resulting in infectious and parasitic diseases
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).