Congenital malformations of ear causing impairment of hearing

Q17_CONGEN_MALFO_EAR_CAUSI_IMPAIRM_HEARING

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Q16
  • Cause of death: ICD-10 Q16

2 out of 7 registries used, show all original rules.

130

4. Check minimum number of events

None

130

5. Include endpoints

None

130

6. Filter based on genotype QC (FinnGen only)

130

Control definitions (FinnGen only)

Control exclude
Q17_CONGEN_MALFO_EYE_EAR_FACE_NECK

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
Q1
Name in latin
Malformationes congenitae auris cum hypacusi

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1650 742 906
Only index persons 1416 646 770
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.03
Only index persons 0.03 0.02 0.03
Median age at first event (years)
Whole population 11.63 13.91 9.73
Only index persons 14.11 16.09 12.45

-FinnGen-

Key figures

All Female Male
Number of individuals 130 75 55
Unadjusted period prevalence (%) 0.03 0.03 0.02
Median age at first event (years) 27.56 22.65 34.25

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
120
Matched controls
1201
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
Q16.1
ICD-10 Finland
Congenital absence, atresia and stricture of auditory canal (external)
+∞
69.7
60
*
Q17.2
ICD-10 Finland
Microtia
+∞
34.0
31
*
H90.1
ICD-10 Finland
Conductive hearing loss, unilateral with unrestricted hearing on the contralateral side
156.4
33.7
34
*
Q16.3
ICD-10 Finland
Congenital malformation of ear ossicles
+∞
30.5
28
*
Q16.0
ICD-10 Finland
Congenital absence of (ear) auricle
+∞
28.2
26
*
H90.6
ICD-10 Finland
Mixed conductive and sensorineural hearing loss, bilateral
45.7
25.8
31
9
UDC00
NOMESCO Finland
Ear microscopy
15.1
25.2
44
44
H90.0
ICD-10 Finland
Conductive hearing loss, bilateral
148.5
23.5
24
*
Z01.1
ICD-10 Finland
Examination of ears and hearing
8.7
20.2
49
88
DFF00
NOMESCO Finland
Pure tone audiometry
12.2
19.6
37
42
DBD20
NOMESCO Finland
Plastic repair of external auditory canal
111.9
18.1
19
*
DC1AD
NOMESCO Finland
Temporalbone CT
39.5
16.3
20
6
H90.7
ICD-10 Finland
Mixed conductive and sensorineural hearing loss, unilateral with unrestricted hearing on the contralateral side
37.2
15.3
19
6
H90.3
ICD-10 Finland
Sensorineural hearing loss, bilateral
8.1
15.1
36
60
DAD10
NOMESCO Finland
Reconstruction of auricle
+∞
13.8
13
*
DBD30
NOMESCO Finland
Correction of atresia of external auditory canal
+∞
13.8
13
*
ZXC10
NOMESCO Finland
Use of laser
42.4
12.5
15
*
DDA00
NOMESCO Finland
Stapedotomy
42.4
12.5
15
*
DAX00
NOMESCO Finland
Adjustment or review of hearing aid
24.4
12.4
17
8
DEE00
NOMESCO Finland
Osseous fixation of hearing aid
+∞
10.6
10
*
ZXA00
NOMESCO Finland
Right side
4.2
9.8
42
135
R5110
NOMESCO Finland
Evaluation of the need for aids, the testing, fitting and choice of the aid, instruction in use and delivery of it
5.8
9.5
28
60
Q16.9
ICD-10 Finland
Congenital malformation of ear causing impairment of hearing, unspecified
+∞
9.5
9
*
Q16.4
ICD-10 Finland
Other congenital malformations of middle ear
+∞
9.5
9
*
R5130
NOMESCO Finland
Repair work or maintenance done on the aid
30.0
8.6
11
*
DAD30
NOMESCO Finland
Plastic repair of auricle
+∞
8.4
8
*
DCD10
NOMESCO Finland
Tympanoplasty
85.1
7.5
8
*
DDD05
NOMESCO Finland
Plastic repair of ossicular chain
+∞
7.4
7
*
Q67.0
ICD-10 Finland
Facial asymmetry
+∞
7.4
7
*
Z97.4
ICD-10 Finland
Presence of external hearing-aid
13.2
7.3
12
10
ZZG00
NOMESCO Finland
Graft of cartilage
73.6
6.5
7
*
DFF15
NOMESCO Finland
Speech audiometry
12.0
6.4
11
10
Q16.2
ICD-10 Finland
Absence of eustachian tube
+∞
6.3
6
*

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
29
112
3.05
5.88
2.1
1.5
—
—
—
0
0
24
112
2.40
3.32
1.5
1.4
—
—
—
0
0
5
10
5.15
2.09
2.0
1.4
—
—
—
0
0
33
221
1.66
1.63
3.5
3.8
—
—
—
0
0
5
16
3.21
1.45
1.2
1.0
—
—
—
0
0
6
131
0.43
1.38
2.0
5.4
3.3
8.4
umol/l
—
6
109
44
328
1.52
1.37
1.9
2.5
—
—
—
0
0
28
378
0.67
1.06
1.8
1.7
—
—
—
0
0
31
226
1.49
1.06
4.5
4.3
—
—
—
0
0
26
183
1.53
1.04
2.1
1.5
—
—
—
0
0
12
68
1.84
1.04
1.6
6.0
—
—
—
0
0
5
22
2.32
1.04
2.4
2.0
—
—
—
0
0
10
54
1.92
0.99
1.0
1.3
—
—
—
0
0
23
318
0.66
0.98
2.9
3.0
85.4
28.2
e6/l
0.69
17
250
92
1004
0.71
0.92
17.2
15.1
333.3
334.2
g/l
0.59
92
998
13
79
1.72
0.92
2.8
5.6
—
7.4
—
0
5
6
29
2.12
0.90
1.3
1.3
—
—
—
0
0
18
256
0.66
0.87
4.6
3.8
0.0
0.0
estimate
—
5
99
8
45
1.83
0.86
6.5
3.3
—
—
—
0
0
19
132
1.51
0.81
2.8
1.8
—
—
—
0
0
41
333
1.34
0.76
2.0
1.8
95.2
96.5
pmol/l
0.06
19
170
10
60
1.72
0.74
1.1
1.8
—
—
—
0
0
63
551
1.28
0.67
5.3
7.3
0.2
0.2
e9/l
0.79
55
492
5
29
1.75
0.64
1.6
3.1
—
—
—
0
0
22
284
0.73
0.63
3.2
2.9
—
—
—
0
0
0
21
0.00
0.60
0.0
1.1
—
—
—
0
0
30
367
0.76
0.60
3.0
3.7
22.1
41.5
e6/l
0.60
18
261
12
81
1.53
0.59
7.8
6.2
—
—
—
0
0
5
86
0.56
0.58
4.6
3.2
—
—
—
0
0
120
1155
1.51
0.54
13.3
10.5
—
—
—
0
0
6
40
1.52
0.52
3.3
4.9
1.1
1.4
%
—
6
40
15
110
1.41
0.51
2.0
1.5
—
—
—
0
0
20
155
1.34
0.50
3.9
2.1
12.3
14.7
umol/l
0.91
20
140
23
285
0.77
0.50
3.2
3.0
0.6
0.3
e6/l
0.48
17
220
7
47
1.52
0.48
2.3
1.8
—
—
—
0
0
8
117
0.66
0.48
1.4
2.6
447.9
357.9
nmol/l
—
8
107
5
81
0.60
0.47
1.8
2.4
—
26.7
—
0
6
76
819
0.83
0.45
4.2
3.9
14.4
14.5
pmol/l
0.17
69
756
18
140
1.33
0.45
4.1
2.1
2.6
2.4
g/l
0.68
18
124
11
78
1.45
0.44
1.9
1.7
—
—
—
0
0
6
93
0.63
0.44
7.8
6.4
5.5
5.2
kpa
—
6
87
6
93
0.63
0.44
7.8
6.4
16.4
13.8
kpa
—
6
87
57
512
1.20
0.43
3.2
2.8
106.9
86.1
ug/l
0.20
52
472
113
1086
1.31
0.42
14.2
11.9
26.9
21.9
mg/l
0.57
86
798
80
855
0.83
0.42
6.9
4.7
40.0
38.6
mmol/mol
0.65
73
806
13
97
1.38
0.41
1.8
1.5
—
—
—
0
0
0
18
0.00
0.40
0.0
1.9
—
282.5
—
0
11
24
287
0.80
0.40
2.5
2.8
—
—
—
0
0
5
35
1.45
0.39
1.2
1.4
—
—
—
0
0
0
19
0.00
0.39
0.0
1.7
—
—
—
0
0
69
635
1.18
0.39
8.5
10.1
4.2
4.1
e9/l
0.07
61
556
19
232
0.79
0.37
1.9
2.4
0.4
1.2
mg/l
1.44
13
168
13
99
1.35
0.37
1.2
1.3
—
—
—
0
0
6
41
1.49
0.36
2.0
1.9
—
—
—
0
0
26
305
0.82
0.36
1.4
1.5
1.8
2.0
g/l
0.25
20
181
5
80
0.61
0.36
9.0
7.1
97.3
96.3
%
—
5
75
5
80
0.61
0.36
1.0
1.6
—
—
—
0
0
35
306
1.20
0.35
4.0
2.9
2.3
2.4
mmol/l
0.18
30
275
16
197
0.79
0.34
2.3
2.6
526.5
550.2
mosm/kgh2o
0.14
16
169
115
1114
1.28
0.33
13.5
12.6
79.0
72.1
umol/l
0.54
115
1114
6
46
1.32
0.33
1.8
2.5
100.0
160.3
ng/l
—
6
38
6
47
1.29
0.32
1.7
1.6
—
—
—
0
0
58
534
1.16
0.31
5.5
6.9
0.0
0.0
e9/l
0.16
51
467
58
534
1.16
0.31
5.4
6.9
0.6
0.6
e9/l
0.22
51
465
29
330
0.84
0.30
1.3
1.4
0.6
1.3
u/ml
—
8
70
95
988
0.86
0.28
4.0
3.6
1.5
1.5
mmol/l
0.06
90
910
5
73
0.67
0.27
1.2
1.4
—
—
—
0
0
5
73
0.67
0.27
1.2
1.4
—
—
—
0
0
33
294
1.16
0.26
1.7
1.7
—
—
—
0
0
46
500
0.88
0.26
8.4
8.8
0.0
0.0
e9/l
0.49
34
401
19
222
0.83
0.26
5.4
4.0
9.9
18.7
mg/mmol
0.44
14
131
60
560
1.13
0.25
5.5
6.8
1.9
1.9
e9/l
0.30
53
500
94
974
0.87
0.23
4.6
4.5
1.9
1.8
mu/l
0.24
84
909
5
38
1.33
0.23
1.6
1.2
—
—
—
0
0
18
209
0.84
0.23
1.3
1.6
—
—
—
0
0
91
944
0.88
0.23
3.7
3.4
1.4
1.3
mmol/l
0.45
86
864
13
107
1.24
0.22
1.8
1.5
—
—
—
0
0
46
495
0.89
0.21
4.3
4.9
0.0
0.0
estimate
—
5
103
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
1.6
—
—
—
0
0
0
11
0.00
0.21
0.0
1.3
—
163.2
—
0
11
0
11
0.00
0.21
0.0
5.3
—
1.0
—
0
11
0
10
0.00
0.21
0.0
1.0
—
0.4
—
0
5
0
10
0.00
0.21
0.0
1.2
—
1.6
—
0
10
0
10
0.00
0.21
0.0
1.0
—
20.1
—
0
10
0
10
0.00
0.21
0.0
2.1
—
—
—
0
0
0
10
0.00
0.21
0.0
2.0
—
2.4
—
0
10
97
1001
0.88
0.21
4.4
4.0
2.8
2.8
mmol/l
0.34
91
924
0
12
0.00
0.21
0.0
1.8
—
—
—
0
0
0
12
0.00
0.21
0.0
1.2
—
—
—
0
0
0
12
0.00
0.21
0.0
1.0
—
—
—
0
0
13
108
1.23
0.21
1.8
1.5
—
—
—
0
0
13
108
1.23
0.21
1.8
1.5
—
—
—
0
0
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
35
382
0.89
0.20
2.1
2.5
—
—
—
0
0
0
14
0.00
0.20
0.0
4.9
—
—
—
0
0
0
14
0.00
0.20
0.0
2.4
—
57.2
—
0
14
13
153
0.83
0.19
22.2
7.5
1.1
1.1
mmol/l
0.02
13
142
47
502
0.90
0.19
4.8
6.6
9.9
11.8
umol/l
0.98
40
469
63
598
1.10
0.18
5.4
4.6
7.1
6.5
mmol/l
0.71
55
532
7
62
1.14
0.17
1.3
1.2
—
—
—
0
0
47
500
0.91
0.17
3.1
3.5
0.0
0.0
estimate
—
5
96
5
65
0.76
0.17
2.4
3.3
4.3
4.9
pmol/l
—
5
57
6
76
0.78
0.16
1.2
1.5
—
—
—
0
0
6
78
0.76
0.16
1.0
4.5
1.8
13.2
ug/l
—
6
59
9
78
1.17
0.16
3.1
9.1
24.1
24.9
mmol/l
—
9
78
38
354
1.10
0.15
5.1
6.6
—
—
—
0
0
11
128
0.85
0.14
1.1
1.2
—
—
—
0
0
68
706
0.92
0.14
4.1
3.9
—
—
—
0
0
70
676
1.08
0.12
3.8
4.0
—
63.2
—
0
12
15
167
0.88
0.11
2.7
5.3
0.8
0.8
mmol/l
0.11
15
154
10
86
1.18
0.11
1.4
1.5
—
—
—
0
0
65
628
1.07
0.11
3.1
3.1
—
—
—
0
0
27
289
0.92
0.10
5.0
7.9
—
—
—
0
0
14
125
1.13
0.10
3.9
2.6
0.8
0.7
ug/l
—
9
78
15
135
1.13
0.10
1.0
1.2
—
—
—
0
0
47
489
0.94
0.09
3.1
3.5
0.0
0.0
estimate
—
5
100
12
107
1.13
0.09
1.8
1.5
—
—
—
0
0
23
246
0.92
0.09
1.5
1.7
—
—
—
0
0
7
67
1.05
0.08
2.1
1.4
—
—
—
0
0
6
74
0.80
0.08
1.2
1.5
—
—
—
0
0
27
255
1.07
0.07
3.8
4.6
—
—
—
0
0
33
346
0.94
0.07
7.7
6.0
1.6
1.1
inr
—
8
101
11
100
1.11
0.05
6.3
7.5
—
—
—
0
0
32
308
1.05
0.05
4.5
3.7
23.4
44.1
ng/l
0.77
18
187
10
91
1.11
0.04
8.2
10.8
—
—
—
0
0
28
290
0.96
0.03
3.6
3.5
7.8
8.2
mmol/l
0.21
23
247
20
209
0.95
0.03
6.8
3.3
5578.3
125.2
mg/l
0.77
14
131
38
371
1.03
0.02
2.2
2.0
—
—
—
0
0
23
223
1.04
0.01
3.4
3.8
—
—
—
0
0
10
94
1.07
0.01
18.7
17.3
—
1.2
—
0
17
108
1074
1.03
0.00
13.3
12.4
40.6
40.7
%
0.05
80
878
26
266
0.97
0.00
2.0
2.6
2.8
2.7
mg/l
0.14
21
230
12
116
1.04
0.00
1.0
1.2
—
—
—
0
0
18
176
1.03
0.00
1.4
1.3
18.1
22.6
iu/ml
0.19
11
57
12
119
1.01
0.00
1.3
1.2
—
—
—
0
0
27
271
1.00
0.00
2.9
2.7
—
—
—
0
0
37
368
1.01
0.00
1.8
1.9
—
—
—
0
0
39
388
1.01
0.00
3.2
3.4
—
—
—
0
0
18
177
1.02
0.00
1.3
1.2
1.0
7.1
u/ml
—
7
64
96
965
0.98
0.00
3.9
3.5
6.0
5.7
mmol/l
0.61
87
886
14
135
1.04
0.00
2.3
2.1
—
—
—
0
0
17
165
1.03
0.00
2.9
3.2
275.5
218.6
ng/l
—
8
105
75
754
0.99
0.00
3.1
4.1
9.1
10.0
mm/h
0.30
69
696
7
73
0.96
0.00
2.7
1.8
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
463.0
—
0
5
0
8
0.00
0.00
0.0
56.1
—
145.1
—
0
8
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
4.3
—
0
5
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
6.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
11
110
1.00
0.00
1.0
1.4
—
—
—
0
0
0
7
0.00
0.00
0.0
4.1
—
—
—
0
0
0
6
0.00
0.00
0.0
1.8
—
9.2
—
0
6
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
5
59
0.84
0.00
1.4
1.3
—
—
—
0
0
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0
0
8
0.00
0.00
0.0
2.8
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
0
5
0.00
0.00
0.0
17.8
—
10.2
—
0
5
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint Q17_CONGEN_MALFO_EAR_CAUSI_IMPAIRM_HEARING and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have Q17_CONGEN_MALFO_EAR_CAUSI_IMPAIRM_HEARING.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

Index endpoint: Q17_CONGEN_MALFO_EAR_CAUSI_IMPAIRM_HEARING – Congenital malformations of ear causing impairment of hearing

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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