Nephropathy induced by other drugs, medicaments and biological substances

NEPHROP_INDUCED_OTHER_DRUGS_MEDICAM_BIOLO_SUBST

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 N14.1#

1 out of 7 registries used, show all original rules.

59

4. Check minimum number of events

None

59

5. Include endpoints

None

59

6. Filter based on genotype QC (FinnGen only)

59

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
C
First used in FinnGen datafreeze
DF5

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 334 136 196
Only index persons 289 121 168
Unadjusted period prevalence (%)
Whole population 0.00 0.00 0.01
Only index persons 0.01 0.00 0.01
Median age at first event (years)
Whole population 63.70 64.51 62.94
Only index persons 62.17 64.29 60.64

-FinnGen-

Key figures

All Female Male
Number of individuals 59 22 37
Unadjusted period prevalence (%) 0.01 0.01 0.02
Median age at first event (years) 57.07 59.32 55.73

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
53
Matched controls
530
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
N14.1
ICD-10 Finland
Nephropathy induced by other drugs, medicaments and biological substances
+∞
75.9
53
*
N18.9
ICD-10 Finland
Chronic kidney disease, unspecified
32.3
18.9
25
14
138
Kela drug reimbursment
Severe anaemia associated with chronic renal failure
135.8
10.8
11
*
A12AA04
ATC
calcium carbonate; oral
+∞
9.7
9
*
KH1AE
NOMESCO Finland
Urinary tract ultrasound examination
23.9
9.5
13
7
123
Kela drug reimbursment
Chronic disorders of vitamin D metabolism
106.3
8.7
9
*
PBL10
NOMESCO Finland
Construction of arteriovenous fistula from radial artery
+∞
8.6
8
*
N03AG01
ATC
valproic acid; systemic, rectal
15.1
7.5
12
10
N05AH03
ATC
olanzapine; systemic
15.1
7.5
12
10
N11.8
ICD-10 Finland
Other chronic tubulo-interstitial nephritis
+∞
7.5
7
*
B03XA02
ATC
darbepoetin alfa; parenteral
+∞
7.5
7
*
N18.0
ICD-10 Finland
End-stage renal disease
+∞
7.5
7
*
N05AN01
ATC
lithium; oral
35.4
7.4
9
*
A11CC03
ATC
alfacalcidol; systemic
35.4
7.4
9
*
L04AX01
ATC
azathioprine; systemic
13.7
7.2
12
11
N17.9
ICD-10 Finland
Acute renal failure, unspecified
13.7
7.2
12
11
L04AA01
ATC
[U] ciclosporin; systemic
46.1
7.0
8
*
I15.1
ICD-10 Finland
Hypertension secondary to other renal disorders
46.1
7.0
8
*
C03CA01
ATC
furosemide; systemic
5.2
6.8
25
78
N05CD07
ATC
temazepam; oral
7.9
6.6
15
25
Z49.0
ICD-10 Finland
Preparatory care for dialysis
79.0
6.6
7
*
L04AA06
ATC
mycophenolic acid; systemic
30.7
6.4
8
*
KA1AE
NOMESCO Finland
Kidney ultrasound examination
30.7
6.4
8
*
Z94.0
ICD-10 Finland
Kidney transplant status
+∞
6.4
6
*

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
47
183
8.71
12.56
10.1
4.9
34.3
35.9
g/l
1.27
47
171
21
41
7.40
11.30
26.3
9.7
—
—
—
0
0
21
44
6.86
10.49
17.4
5.4
—
—
—
0
0
26
70
5.85
9.95
8.0
2.3
12.5
15.6
umol/l
1.42
26
58
36
131
5.48
9.66
14.5
4.2
7.4
7.4
ph
—
9
30
23
62
5.44
8.65
9.0
2.3
2.1
2.3
g/l
1.56
23
54
33
126
4.67
8.00
8.2
4.5
—
—
—
0
0
42
198
4.89
7.59
24.8
5.9
1.2
1.2
mmol/l
1.08
42
176
32
129
4.24
7.01
5.6
3.1
144.6
93.0
mg/l
0.20
25
86
33
138
4.16
6.83
7.5
3.9
31.9
12.5
mg/mmol
0.49
26
89
33
147
3.82
6.07
13.1
5.5
—
—
—
0
0
42
220
4.16
6.06
14.8
5.9
25.4
26.4
%
0.26
42
205
16
43
4.73
5.83
3.3
2.4
422.8
375.6
nmol/l
0.39
16
36
28
115
3.73
5.75
13.7
5.9
—
—
—
0
0
40
208
3.87
5.72
15.3
6.0
3.1
2.6
%
0.62
40
193
40
211
3.78
5.54
15.6
6.3
9.2
8.7
%
0.45
40
198
30
132
3.59
5.50
5.6
2.9
—
—
—
0
0
26
106
3.60
5.33
4.6
2.9
3.5
5.4
e6/l
0.61
26
95
40
215
3.67
5.30
15.0
5.7
58.5
58.7
%
0.05
40
201
8
6
15.12
5.24
5.5
4.2
—
—
—
0
0
38
203
3.45
4.98
16.2
5.9
0.6
0.7
%
0.58
38
189
18
60
3.88
4.91
2.6
1.9
—
—
—
0
0
12
29
4.94
4.89
1.6
1.3
—
—
—
0
0
8
8
11.32
4.67
1.6
1.0
—
—
—
0
0
31
153
3.16
4.52
2.5
1.8
99.6
89.5
pmol/l
0.53
16
75
27
125
3.14
4.36
3.7
2.6
—
—
—
0
0
12
33
4.31
4.17
1.8
1.8
67.8
66.4
g/l
0.29
12
27
36
203
2.98
4.01
25.4
7.5
1.3
1.2
inr
—
10
65
9
17
6.04
3.67
2.1
1.4
0.5
1.0
ug/l
—
9
17
36
212
2.79
3.56
26.3
9.8
0.0
0.0
e9/l
0.50
30
172
26
132
2.73
3.40
4.7
2.0
169.5
158.0
u/l
0.10
26
126
7
11
7.04
3.28
12.3
2.9
—
—
—
0
0
12
40
3.51
3.18
1.4
1.7
—
—
—
0
0
6
8
8.18
3.13
1.2
1.3
—
—
—
0
0
18
79
2.84
3.05
2.6
1.6
—
—
—
0
0
6
9
7.26
2.94
1.7
1.6
—
—
—
0
0
10
32
3.56
2.79
14.5
3.6
111.1
130.0
g/l
—
10
32
8
19
4.69
2.79
8.6
3.4
0.0
0.1
e6/l
—
8
19
6
10
6.53
2.77
14.2
2.9
76.9
66.8
%
—
6
10
10
33
3.44
2.67
27.7
6.7
23.5
25.4
mmol/l
—
10
33
6
11
5.93
2.61
6.5
2.6
8.6
8.4
kpa
—
6
11
21
108
2.47
2.57
5.5
3.4
—
—
—
0
0
50
391
2.82
2.49
56.0
16.7
14.1
13.6
%
1.49
50
386
19
100
2.33
2.17
2.5
2.0
—
—
—
0
0
11
44
2.84
2.15
1.7
1.2
—
—
—
0
0
7
20
3.82
2.13
5.9
2.6
—
—
—
0
0
44
328
2.34
2.12
6.8
4.0
—
—
—
0
0
5
10
5.34
2.11
7.6
2.8
—
—
—
0
0
6
15
4.32
2.09
1.5
1.3
—
—
—
0
0
6
16
4.05
1.99
5.2
2.9
—
—
—
0
0
8
28
3.14
1.94
14.8
2.3
0.9
1.4
%
—
8
28
29
189
2.05
1.92
6.7
3.2
—
—
—
0
0
43
326
2.18
1.87
9.6
3.9
—
—
—
0
0
6
20
3.22
1.62
1.0
1.1
—
—
—
0
0
7
27
2.80
1.57
25.3
4.5
24.6
23.8
mmol/l
—
7
27
34
247
1.89
1.55
10.0
4.5
0.0
0.0
estimate
—
9
53
28
191
1.89
1.55
6.4
4.4
31.1
29.9
ng/l
0.05
23
139
34
248
1.88
1.52
7.1
3.3
0.0
0.0
estimate
—
9
52
22
141
1.89
1.45
3.4
2.3
—
—
—
0
0
34
252
1.82
1.41
7.1
3.4
0.0
0.0
estimate
—
9
46
18
109
1.94
1.39
13.2
6.4
—
—
—
0
0
6
24
2.66
1.34
32.7
9.8
—
—
—
0
0
6
24
2.66
1.34
10.2
4.2
—
—
—
0
0
5
19
2.78
1.24
1.2
1.3
—
—
—
0
0
6
26
2.45
1.22
1.5
1.2
—
—
—
0
0
21
140
1.78
1.20
6.7
3.5
0.0
0.0
estimate
—
8
50
7
35
2.13
1.04
5.3
4.2
—
—
—
0
0
10
54
2.03
1.04
1.8
1.3
—
—
—
0
0
7
37
2.01
0.97
6.9
3.7
—
—
—
0
0
53
480
2.02
0.95
62.7
15.5
140.0
139.6
mmol/l
0.30
53
467
24
176
1.61
0.94
2.4
1.9
—
—
—
0
0
48
420
1.77
0.88
49.2
14.1
37.9
40.9
%
2.34
37
311
11
66
1.82
0.86
2.9
1.5
—
—
—
0
0
18
126
1.62
0.83
1.4
1.4
—
—
—
0
0
53
482
1.98
0.82
64.0
15.6
4.1
4.0
mmol/l
0.97
53
470
9
54
1.78
0.79
1.7
1.6
—
—
—
0
0
15
106
1.56
0.66
7.7
3.9
—
1.0
—
0
11
8
50
1.69
0.65
1.6
1.5
—
—
—
0
0
0
20
0.00
0.61
0.0
19.3
—
—
—
0
0
7
45
1.63
0.51
1.3
1.3
—
—
—
0
0
11
78
1.50
0.47
1.4
1.2
3.5
2.3
g/l
0.80
11
44
8
58
1.44
0.44
1.3
1.3
—
—
—
0
0
11
80
1.46
0.42
1.8
1.8
437.4
413.8
pmol/l
0.09
11
70
0
18
0.00
0.40
0.0
1.1
—
—
—
0
0
53
501
1.57
0.36
56.5
15.6
163.1
81.6
umol/l
3.95
53
501
52
494
1.44
0.34
39.6
12.7
—
—
—
0
0
15
125
1.27
0.25
2.7
2.7
0.7
0.8
ug/l
—
9
76
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.5
—
—
—
0
0
0
12
0.00
0.21
0.0
1.6
—
—
—
0
0
0
12
0.00
0.21
0.0
1.5
—
—
—
0
0
0
14
0.00
0.20
0.0
2.8
—
—
—
0
0
6
51
1.20
0.20
1.2
1.9
—
—
—
0
0
17
149
1.20
0.18
7.1
2.9
—
—
—
0
0
10
86
1.20
0.12
1.5
1.2
0.8
1.4
u/ml
—
5
25
5
43
1.18
0.10
5.0
3.9
—
—
—
0
0
5
47
1.07
0.09
1.6
1.4
—
—
—
0
0
17
177
0.94
0.01
3.3
3.0
—
—
—
0
0
14
135
1.05
0.00
3.4
4.4
—
—
—
0
0
53
526
1.07
0.00
72.1
19.7
4.1
4.6
e12/l
5.47
53
513
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
53
526
1.07
0.00
71.8
19.6
30.8
30.5
pg
0.67
53
519
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
7
0.00
0.00
0.0
2.3
—
106.9
—
0
7
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
53
526
1.07
0.00
72.2
19.8
6.6
6.7
e9/l
0.20
53
512
0
5
0.00
0.00
0.0
1.2
—
12.9
—
0
5
0
5
0.00
0.00
0.0
2.6
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
53
526
1.07
0.00
72.3
19.8
124.8
138.3
g/l
5.67
53
519
0
7
0.00
0.00
0.0
2.3
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
53
526
1.07
0.00
71.9
19.6
93.2
91.3
fl
1.86
53
519
53
525
1.09
0.00
72.2
19.7
236.4
241.8
e9/l
0.20
53
512
0
7
0.00
0.00
0.0
2.3
—
4.0
—
0
7

Mortality – FinRegistry

Association

Association between endpoint NEPHROP_INDUCED_OTHER_DRUGS_MEDICAM_BIOLO_SUBST and mortality.

Females

No data

Males

Parameter HR [95% CI] p-value
NEPHROP_INDUCED_OTHER_DRUGS_MEDICAM_BIOLO_SUBST 4.17 [2.8, 6.2] < 0.001
Birth year 0.983 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 76 out of 162 males with NEPHROP_INDUCED_OTHER_DRUGS_MEDICAM_BIOLO_SUBST died.

Mortality risk

Mortality risk for people of age

years, who have NEPHROP_INDUCED_OTHER_DRUGS_MEDICAM_BIOLO_SUBST.

N-year risk Females Males
1 No data 0.833%
5 No data 4.413%
10 No data 10.621%
15 No data 18.911%
20 No data 30.656%

Relationships between endpoints

Index endpoint: NEPHROP_INDUCED_OTHER_DRUGS_MEDICAM_BIOLO_SUBST – Nephropathy induced by other drugs, medicaments and biological substances

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
loading spinner Loading data