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This is a non-core endpoint: only basic statistics are computed.

Foreign object accidentally left in body during surgical and medical care

VWXY20_FOREI_OBJECT_ACCIDENTALLY_LEFT_BODY_SURGI_MEDICAL_CARE

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Y61
  • Cause of death: ICD-10 Y61

2 out of 7 registries used, show all original rules.

116

4. Check minimum number of events

None

116

5. Include endpoints

None

116

6. Filter based on genotype QC (FinnGen only)

113

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
Y6

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 113 83 30
Unadjusted period prevalence (%) 0.03 0.03 0.01
Median age at first event (years) 54.07 49.16 67.64

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
116
Matched controls
1160
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
Y61
ICD-10 Finland
Foreign object accidentally left in body during surgical and medical care
+∞
67.4
58
*
Y61.0
ICD-10 Finland
Foreign object accidentally left in body during surgical and medical care during surgical operation
+∞
17.1
16
*
Y61.9
ICD-10 Finland
Foreign object accidentally left in body during surgical and medical care during unspecified surgical and medical care
+∞
16.0
15
*
Y61.8
ICD-10 Finland
Foreign object accidentally left in body during surgical and medical care during other surgical and medical care
+∞
16.0
15
*
T81.58
ICD-10 Finland
Foreign body accidentally left in body cavity or operation wound following a procedure
+∞
11.6
11
*
Y83
ICD-10 Finland
Surgical operation and other surgical procedures as the cause of abnormal reaction of the patient, or of later complication, without mention of misadventure at the time of the procedure
6.2
11.6
22
42
T81.4
ICD-10 Finland
Infection following a procedure, not elsewhere classified
5.0
10.9
27
66
JAL11
NOMESCO Finland
Laparoscopy and removal of foreign body
73.7
6.5
7
*
T19.1
ICD-10 Finland
Foreign body in bladder
+∞
6.3
6
*

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
69
474
2.12
3.79
5.7
6.1
0.19
0.18
e9/l
0.18
61
427
58
380
2.05
3.54
5.1
5.9
1.21
1.21
mmol/l
0.10
53
342
47
285
2.09
3.53
3.6
2.4
—
—
—
0
0
76
554
2.08
3.41
7.5
9.8
4.19
4.09
e9/l
0.16
67
492
26
128
2.33
3.23
1.4
3.0
4.47
3.42
e6/l
0.14
12
74
90
708
2.21
3.19
4.7
4.2
13.14
10.83
mm/h
0.72
84
652
65
456
1.97
3.16
5.9
5.8
0.04
0.04
e9/l
0.08
57
404
65
457
1.96
3.13
5.8
5.8
0.57
0.55
e9/l
0.39
57
404
61
424
1.93
3.00
6.7
6.9
1.21
1.22
mmol/l
0.43
55
360
66
471
1.93
3.00
6.0
5.9
1.89
1.85
e9/l
0.15
60
428
36
211
2.02
2.89
1.7
1.6
2.34
0.85
mg/l
1.03
25
165
36
221
1.91
2.49
4.8
3.9
—
—
—
0
0
36
227
1.85
2.28
4.4
3.6
—
—
—
0
0
9
29
3.28
2.28
3.6
2.2
—
—
—
0
0
56
406
1.73
2.21
16.9
13.9
1.09
1.18
inr
0.38
13
126
70
546
1.71
2.07
6.2
4.3
6.52
6.49
mmol/l
0.06
61
492
65
503
1.66
1.93
5.3
3.5
0.00
0.00
estimate
—
9
104
22
124
1.96
1.93
3.6
1.9
—
—
—
0
0
14
66
2.28
1.91
4.9
4.7
0.33
0.45
%
—
6
20
48
346
1.66
1.86
3.9
3.8
30.19
24.21
ng/l
0.36
32
232
19
103
2.01
1.85
1.2
1.3
—
—
—
0
0
46
329
1.66
1.83
4.7
2.8
—
—
—
0
0
55
413
1.63
1.80
6.1
8.7
0.00
0.00
e9/l
0.71
43
343
64
504
1.60
1.70
6.5
4.7
0.00
0.00
estimate
—
8
97
8
31
2.69
1.69
8.6
3.8
—
—
—
0
0
82
687
1.66
1.68
6.7
4.2
—
—
—
0
0
57
438
1.59
1.67
6.7
6.7
—
—
—
0
0
64
506
1.59
1.66
5.1
3.6
0.00
0.00
estimate
—
7
94
18
100
1.95
1.64
1.3
1.4
—
—
—
0
0
106
959
2.22
1.64
21.3
13.1
28.33
21.57
mg/l
0.92
93
723
100
888
1.91
1.62
4.5
4.8
1.85
1.83
mu/l
0.07
95
806
40
284
1.62
1.61
1.8
1.6
—
—
—
0
0
10
44
2.39
1.60
13.2
6.4
—
—
—
0
0
15
81
1.98
1.48
5.9
3.7
—
—
—
0
0
7
28
2.59
1.47
9.4
4.9
1.31
1.07
mmol/l
—
7
23
5
123
0.38
1.47
1.4
1.9
—
—
—
0
0
86
740
1.63
1.47
3.7
4.1
14.75
14.62
pmol/l
0.26
79
668
13
68
2.03
1.40
6.2
5.1
0.00
0.14
%
—
5
21
46
348
1.53
1.38
3.8
3.4
34.65
92.70
e6/l
1.26
25
245
93
823
1.66
1.34
23.9
17.3
330.92
332.10
g/l
0.64
93
818
45
347
1.48
1.21
1.8
1.9
110.58
95.15
pmol/l
1.08
24
180
18
112
1.72
1.17
2.7
1.5
—
—
—
0
0
100
911
1.71
1.16
4.7
4.2
5.86
5.82
mmol/l
0.13
90
833
18
116
1.65
1.04
1.2
1.2
—
—
—
0
0
23
158
1.57
1.04
2.7
3.6
20.80
90.84
ng/l
1.07
15
105
13
76
1.80
1.04
6.2
4.8
0.00
0.78
%
—
5
29
102
941
1.70
1.04
4.6
4.5
2.66
2.72
mmol/l
0.28
97
868
35
264
1.47
1.03
2.8
2.9
0.02
0.40
e6/l
3.56
21
200
34
256
1.46
1.01
2.8
2.7
—
—
—
0
0
97
887
1.57
0.99
3.8
3.6
1.22
1.20
mmol/l
0.11
90
816
10
55
1.90
0.95
1.1
1.2
—
—
—
0
0
26
190
1.47
0.89
1.3
1.3
41.34
32.20
iu/ml
—
8
68
0
25
0.00
0.80
0.0
1.1
—
—
—
0
0
99
921
1.51
0.79
4.0
4.0
1.49
1.53
mmol/l
0.51
94
853
10
60
1.73
0.75
1.6
3.9
—
—
—
0
0
36
291
1.34
0.70
3.1
3.0
82.78
253.62
e6/l
0.35
22
228
69
613
1.31
0.69
3.7
3.6
—
—
—
0
0
34
277
1.32
0.63
5.7
3.8
0.00
0.00
estimate
—
7
95
10
64
1.62
0.61
1.3
1.1
—
—
—
0
0
10
64
1.62
0.61
6.1
8.8
—
—
—
0
0
0
21
0.00
0.60
0.0
1.9
—
—
—
0
0
5
89
0.54
0.58
5.6
3.3
—
—
—
0
0
12
82
1.52
0.57
4.7
4.0
—
—
—
0
0
9
65
1.42
0.52
1.4
1.3
—
—
—
0
0
29
238
1.29
0.51
5.9
7.3
—
—
—
0
0
11
76
1.49
0.50
3.5
5.7
—
—
—
0
0
7
48
1.49
0.48
1.1
1.1
—
—
—
0
0
46
403
1.23
0.47
2.1
1.9
—
—
—
0
0
24
194
1.30
0.47
1.5
1.2
0.82
11.52
u/ml
—
9
75
7
50
1.43
0.46
2.7
2.1
—
—
—
0
0
8
60
1.36
0.41
1.5
1.4
39.89
120.65
u/ml
—
8
52
0
18
0.00
0.40
0.0
1.1
—
—
—
0
0
17
134
1.31
0.39
1.9
1.4
432.00
515.79
titre
—
5
38
0
19
0.00
0.39
0.0
1.1
—
2.70
—
0
10
0
19
0.00
0.39
0.0
1.1
—
0.96
—
0
9
30
256
1.23
0.38
3.5
3.5
4.85
11.36
mg/mmol
1.15
21
151
9
71
1.29
0.37
1.0
1.5
—
—
—
0
0
6
46
1.32
0.33
2.8
2.7
0.83
0.70
%
—
6
46
28
241
1.21
0.33
1.3
1.2
0.71
2.49
u/ml
—
10
58
13
102
1.31
0.31
9.5
6.0
104.92
103.98
mmol/l
0.57
13
102
7
53
1.34
0.31
4.9
3.5
—
—
—
0
0
7
56
1.27
0.30
1.6
1.7
—
—
—
0
0
7
57
1.24
0.29
3.9
2.0
1.51
1.72
g/l
—
7
51
10
127
0.77
0.27
1.2
1.5
—
—
—
0
0
10
77
1.33
0.27
1.0
1.5
—
—
—
0
0
6
85
0.69
0.25
1.3
1.4
—
—
—
0
0
5
38
1.33
0.23
2.6
1.4
1.20
1.17
g/l
—
5
38
5
38
1.33
0.23
2.6
1.4
0.24
0.22
g/l
—
5
38
27
240
1.16
0.23
2.6
2.9
34.32
331.20
mg/l
0.58
17
153
0
10
0.00
0.21
0.0
1.4
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
6
47
1.29
0.21
8.0
4.1
—
—
—
0
0
6
48
1.26
0.20
2.8
2.7
1.07
1.25
%
—
6
48
0
14
0.00
0.20
0.0
1.5
—
—
—
0
0
0
14
0.00
0.20
0.0
2.3
—
90.62
—
0
14
11
90
1.25
0.20
1.1
1.2
—
—
—
0
0
7
59
1.20
0.18
3.6
2.0
—
—
—
0
0
9
82
1.11
0.15
2.3
2.4
—
17.51
—
0
7
15
170
0.86
0.15
1.3
1.7
—
—
—
0
0
14
122
1.17
0.14
5.6
2.4
13.16
12.84
umol/l
0.05
14
113
12
137
0.86
0.12
1.2
1.4
—
—
—
0
0
23
250
0.90
0.12
5.1
3.8
—
—
—
0
0
5
43
1.17
0.10
7.0
2.6
1.42
1.50
g/l
—
5
35
13
116
1.14
0.10
1.1
1.2
—
—
—
0
0
31
295
1.07
0.07
3.8
3.0
2.30
2.36
mmol/l
2.37
31
257
34
354
0.94
0.06
2.8
2.6
—
—
—
0
0
21
220
0.94
0.04
1.3
1.7
—
—
—
0
0
12
112
1.08
0.03
6.3
2.4
2.17
2.41
g/l
1.25
12
101
29
298
0.96
0.02
5.1
3.0
—
—
—
0
0
25
256
0.97
0.00
1.4
1.9
—
—
—
0
0
22
215
1.03
0.00
1.5
1.4
2.70
2.48
g/l
0.23
17
125
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
0.00
0.0
1.6
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
13.01
—
0
7
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
11.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.9
—
32.63
—
0
8
0
8
0.00
-0.00
0.0
2.5
—
—
—
0
0
6
65
0.92
-0.00
5.3
3.4
67.42
66.04
g/l
—
6
60
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
8
89
0.89
-0.00
1.3
1.2
—
—
—
0
0
9
92
0.98
-0.00
2.6
1.9
305.00
369.99
nmol/l
—
9
83
0
9
0.00
-0.00
0.0
1.2
—
35.63
—
0
9
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.4
—
1.70
—
0
8
0
8
0.00
-0.00
0.0
2.1
—
63.13
—
0
8
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
8
80
1.00
-0.00
1.9
1.2
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: VWXY20_FOREI_OBJECT_ACCIDENTALLY_LEFT_BODY_SURGI_MEDICAL_CARE – Foreign object accidentally left in body during surgical and medical care

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).