≡ Risteys
R13

Documentation Changelog GitHub Contact & Feedback

Other cestode infections

Endpoint Browser PheWeb

AB1_OTHER_CESTODE

Endpoint definition

↥

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — B71
  • Hospital discharge: ICD-9 — 123[8-9]
  • Hospital discharge: ICD-8 — 123[4|6|9]
  • Cause of death: ICD-10 — B71
  • Cause of death: ICD-9 — 123[8-9]
  • Cause of death: ICD-8 — 123[4|6|9]

2 out of 7 registries used, show all original rules.

127

4. Check minimum number of events

None

127

5. Include endpoints

None

127

6. Filter based on genotype QC (FinnGen only)

122

Control definitions (FinnGen only)

Control exclude
AB1_HELMINTIASES

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF5

Case counts by codes

↥

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

↥

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2465 1269 1158
Only index persons 1203 748 455
Unadjusted period prevalence (%)
Whole population 0.03 0.04 0.03
Only index persons 0.02 0.03 0.02
Median age at first event (years)
Whole population 46.48 45.08 47.93
Only index persons 34.71 33.86 36.12

-FinnGen-

Key figures

All Female Male
Number of individuals 122 67 55
Unadjusted period prevalence (%) 0.02 0.02 0.03
Median age at first event (years) 33.81 30.11 38.33

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

↥

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
126
Matched controls
1260
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
12340
ICD-8 Finland
Other cestode infection, Diphyllobothriasis, intestinal
+∞
161.7
118
*
XFP96
NOMESCO Finland
Other intraoperative electrophysiological investigation in arhythmia or disturbance of impulse propagation
12.1
10.2
18
17

LabWAS

↥
OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
20
30
7.71
8.79
10.3
18.5
—
—
—
0
0
8
303
0.21
6.25
2.4
4.2
—
—
—
0
0
41
210
2.41
4.75
5.8
5.0
1.02
1.02
kg/l
—
5
39
63
848
0.49
3.84
4.4
4.8
4.52
4.55
mmol/l
0.10
63
751
11
276
0.34
3.12
2.3
3.3
—
—
—
0
0
16
334
0.40
3.01
2.9
2.9
2.28
2.35
mmol/l
1.01
16
291
6
9
6.93
2.90
1.2
1.8
—
—
—
0
0
9
204
0.40
2.21
2.3
3.0
443.00
552.30
mosm/kgh2o
—
9
175
28
423
0.57
1.90
3.5
3.8
36.19
34.97
g/l
0.55
28
382
16
85
2.01
1.64
6.6
3.2
—
—
—
0
0
23
352
0.58
1.59
1.7
2.1
—
—
—
0
0
31
206
1.67
1.58
6.0
4.2
—
—
—
0
0
11
209
0.48
1.53
1.2
1.3
—
—
—
0
0
22
336
0.58
1.49
2.6
3.7
4.95
124.10
e6/l
2.75
17
245
10
193
0.48
1.45
2.2
2.9
2.39
2.46
mmol/l
—
10
167
15
252
0.54
1.42
3.3
4.0
—
—
—
0
0
49
617
0.66
1.41
4.7
4.5
—
—
—
0
0
9
41
2.29
1.40
2.0
1.2
—
—
—
0
0
5
112
0.42
1.20
3.2
4.1
2.24
74.11
ug/l
—
5
90
86
959
0.67
1.19
21.3
23.7
40.38
39.41
%
1.06
72
880
0
33
0.00
1.18
0.0
4.4
—
—
—
0
0
0
34
0.00
1.18
0.0
3.1
—
1.56
—
0
29
81
702
1.43
1.10
19.0
21.6
331.04
331.29
g/l
0.08
81
693
20
291
0.63
1.09
2.4
3.2
83.12
25.17
e6/l
0.36
15
225
87
959
0.70
1.00
20.5
23.6
239.66
242.59
e9/l
0.15
87
923
87
959
0.70
1.00
20.6
23.8
132.90
132.85
g/l
0.01
87
933
87
959
0.70
1.00
20.4
23.5
29.98
30.36
pg
1.23
87
933
0
29
0.00
0.99
0.0
2.7
—
1.53
—
0
29
0
28
0.00
0.99
0.0
2.8
—
7.97
—
0
28
87
958
0.70
0.98
20.5
23.6
90.34
91.50
fl
1.54
87
932
18
259
0.64
0.93
1.8
3.0
—
—
—
0
0
27
354
0.70
0.87
1.7
2.4
144.00
117.49
ug/l
0.21
27
314
15
218
0.65
0.81
2.5
2.7
1.65
3.61
e6/l
2.49
15
196
0
27
0.00
0.78
0.0
2.7
—
1.55
—
0
22
0
27
0.00
0.78
0.0
1.3
—
—
—
0
0
0
27
0.00
0.78
0.0
1.4
—
—
—
0
0
15
215
0.66
0.76
1.6
1.6
1.27
1.28
mmol/l
0.03
15
172
9
144
0.60
0.75
1.4
2.0
2.39
2.30
g/l
—
9
127
10
157
0.61
0.75
1.6
1.9
13.46
12.77
umol/l
—
10
139
22
290
0.71
0.72
3.4
3.5
2.79
6.18
mg/mmol
1.09
12
173
36
436
0.76
0.69
5.9
5.9
1.21
1.21
mmol/l
0.12
36
388
85
920
0.77
0.66
15.8
19.0
76.69
79.78
umol/l
0.57
85
920
15
105
1.49
0.63
1.5
1.6
—
—
—
0
0
86
927
0.77
0.62
14.9
18.8
4.04
4.00
mmol/l
0.71
86
887
0
21
0.00
0.60
0.0
4.8
—
50.19
—
0
21
0
21
0.00
0.60
0.0
2.7
—
16.90
—
0
8
84
906
0.78
0.59
14.6
14.9
—
—
—
0
0
0
23
0.00
0.59
0.0
2.5
—
4.03
—
0
23
0
23
0.00
0.59
0.0
2.5
—
—
—
0
0
0
23
0.00
0.59
0.0
2.5
—
107.61
—
0
23
86
924
0.78
0.58
15.1
18.9
140.01
139.51
mmol/l
1.03
86
883
33
396
0.77
0.57
7.6
6.3
—
—
—
0
0
9
132
0.66
0.55
3.9
4.0
0.99
1.03
mmol/l
—
9
119
82
882
0.80
0.53
13.5
16.1
28.18
24.10
mg/l
0.50
65
715
6
40
1.52
0.52
1.7
1.4
—
—
—
0
0
18
232
0.74
0.52
1.4
1.6
18.18
21.23
nmol/l
0.50
18
186
7
109
0.62
0.51
1.4
1.3
—
—
—
0
0
22
270
0.78
0.45
3.1
2.9
3056.54
507.10
mg/l
0.38
13
174
22
178
1.29
0.42
2.3
3.1
1760.56
98.01
ng/l
0.57
16
143
0
15
0.00
0.41
0.0
1.1
—
—
—
0
0
0
15
0.00
0.41
0.0
1.7
—
—
—
0
0
0
16
0.00
0.41
0.0
2.3
—
5.57
—
0
16
0
16
0.00
0.41
0.0
1.4
—
—
—
0
0
0
16
0.00
0.41
0.0
1.4
—
—
—
0
0
7
104
0.65
0.41
1.3
1.2
—
—
—
0
0
0
17
0.00
0.41
0.0
2.7
—
58.53
—
0
17
0
18
0.00
0.40
0.0
1.4
—
—
—
0
0
10
72
1.42
0.38
1.3
1.6
—
—
—
0
0
9
122
0.72
0.37
9.9
6.1
12.76
11.26
kpa
—
9
114
9
122
0.72
0.37
9.9
6.1
4.87
4.97
kpa
—
9
114
5
77
0.64
0.37
1.4
1.6
—
—
—
0
0
19
231
0.79
0.36
6.7
7.6
—
—
—
0
0
46
510
0.85
0.36
3.8
5.9
12.65
11.01
umol/l
0.51
46
470
10
73
1.40
0.36
1.6
2.1
94.20
240.26
ng/l
—
10
62
10
73
1.40
0.36
1.7
3.3
73.01
69.98
e9/l
—
10
59
6
88
0.67
0.34
6.3
3.4
65.10
66.37
g/l
—
6
78
6
45
1.35
0.34
3.8
4.6
—
—
—
0
0
7
100
0.68
0.32
1.4
1.3
—
—
—
0
0
8
62
1.31
0.28
4.9
3.2
—
—
—
0
0
10
128
0.76
0.28
8.1
5.8
106.00
104.07
mmol/l
—
10
128
35
390
0.86
0.28
1.8
1.9
79.43
94.19
pmol/l
0.88
18
170
12
149
0.78
0.27
3.0
3.2
0.85
0.82
mmol/l
0.22
12
137
45
489
0.88
0.25
13.8
15.4
1.60
1.27
inr
0.68
11
133
12
146
0.80
0.23
1.5
1.9
—
—
—
0
0
5
39
1.29
0.23
6.4
3.0
4.46
4.33
pmol/l
—
5
33
26
292
0.86
0.23
4.7
2.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.2
—
—
—
0
0
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.2
—
—
—
0
0
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
2.2
—
—
—
0
0
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
2.8
—
—
—
0
0
0
12
0.00
0.21
0.0
2.8
—
—
—
0
0
0
12
0.00
0.21
0.0
1.8
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
12
0.00
0.21
0.0
1.7
—
32.17
—
0
12
0
13
0.00
0.21
0.0
2.3
—
88.84
—
0
13
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.8
—
4.11
—
0
13
0
14
0.00
0.20
0.0
1.1
—
31.91
—
0
14
0
14
0.00
0.20
0.0
1.1
—
46425.71
—
0
7
26
288
0.88
0.19
2.7
4.1
—
—
—
0
0
6
78
0.76
0.16
11.7
7.0
—
—
—
0
0
6
79
0.75
0.16
6.2
3.0
—
—
—
0
0
29
312
0.91
0.13
1.9
2.2
48.38
57.15
u/l
1.13
29
284
5
43
1.17
0.10
2.2
2.5
—
—
—
0
0
20
216
0.91
0.09
1.7
3.5
82.95
87.48
%
0.28
20
211
7
68
1.03
0.08
2.0
3.1
9.34
9.67
g/l
—
7
60
6
70
0.85
0.08
1.8
1.4
—
—
—
0
0
38
364
1.06
0.07
5.5
4.0
—
5.70
—
0
20
8
76
1.06
0.07
4.9
5.7
24.55
24.50
mmol/l
—
8
70
8
91
0.87
0.07
2.1
2.5
1.52
2.08
mmol/l
—
8
71
26
274
0.94
0.07
4.3
4.9
2.47
2.22
ug/l
0.13
26
238
11
100
1.11
0.05
1.5
1.7
—
—
—
0
0
10
110
0.90
0.05
8.9
6.5
95.55
95.14
%
—
10
105
23
241
0.94
0.04
1.6
2.0
3.09
3.29
mg/l
0.21
23
204
42
419
1.00
0.00
3.5
4.5
25.29
34.79
ng/l
0.65
32
328
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.9
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
6.98
—
0
5
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
3.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.3
—
8.62
—
0
6
63
630
1.00
-0.00
4.3
4.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.3
—
—
—
0
0
5
51
0.98
-0.00
2.8
2.5
2.48
1.34
%
—
5
51
0
6
0.00
-0.00
0.0
2.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
3.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
5
49
1.02
-0.00
2.8
2.5
0.44
0.74
%
—
5
49
0
5
0.00
-0.00
0.0
1.2
—
29.80
—
0
5
0
9
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.1
—
6.69
—
0
9
0
6
0.00
-0.00
0.0
1.0
—
12.25
—
0
6
8
87
0.91
-0.00
1.4
1.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.6
—
—
—
0
0
34
340
1.00
-0.00
3.6
3.3
—
—
—
0
0
0
9
0.00
-0.00
0.0
2.4
—
32.83
—
0
9
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
7
76
0.92
-0.00
4.6
3.5
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
5
57
0.87
-0.00
1.0
1.3
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

↥

Association

Association between endpoint AB1_OTHER_CESTODE and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have AB1_OTHER_CESTODE.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

↥

Index endpoint: AB1_OTHER_CESTODE – Other cestode infections

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
loading spinner Loading data