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Other cestode infections

Endpoint Browser PheWeb

AB1_OTHER_CESTODE

Endpoint definition

↥

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 — B71
  • Hospital discharge: ICD-9 — 123[8-9]
  • Hospital discharge: ICD-8 — 123[4|6|9]
  • Cause of death: ICD-10 — B71
  • Cause of death: ICD-9 — 123[8-9]
  • Cause of death: ICD-8 — 123[4|6|9]

2 out of 7 registries used, show all original rules.

126

4. Check minimum number of events

None

126

5. Include endpoints

None

126

6. Filter based on genotype QC (FinnGen only)

126

Control definitions (FinnGen only)

Control exclude
AB1_HELMINTIASES

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF5

Case counts by codes

↥

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

↥

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2465 1269 1158
Only index persons 1203 748 455
Unadjusted period prevalence (%)
Whole population 0.03 0.04 0.03
Only index persons 0.02 0.03 0.02
Median age at first event (years)
Whole population 46.48 45.08 47.93
Only index persons 34.71 33.86 36.12

-FinnGen-

Key figures

All Female Male
Number of individuals 126 70 56
Unadjusted period prevalence (%) 0.02 0.02 0.02
Median age at first event (years) 33.98 30.39 38.46

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

↥

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
110
Matched controls
1111
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
12340
ICD-8 Finland
Other cestode infection, Diphyllobothriasis, intestinal
+∞
144.7
105
*
XFP96
NOMESCO Finland
Other intraoperative electrophysiological investigation in arhythmia or disturbance of impulse propagation
22.0
12.0
17
9

LabWAS

↥
OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
20
30
7.75
13.18
10.3
18.5
—
—
—
0
0
7
302
0.19
6.86
2.6
4.2
—
—
—
0
0
41
210
2.42
4.76
5.8
5.0
1.0
1.0
kg/l
—
5
39
62
840
0.48
3.93
4.4
4.8
4.5
4.5
mmol/l
0.10
62
744
10
273
0.31
3.39
2.3
3.3
—
—
—
0
0
6
9
6.93
2.90
1.2
1.8
—
—
—
0
0
57
746
0.57
2.50
16.4
17.3
40.0
38.7
%
0.42
36
473
9
199
0.41
2.08
2.3
2.9
443.0
560.7
mosm/kgh2o
—
9
170
28
420
0.57
1.84
3.5
3.8
36.2
34.9
g/l
0.56
28
378
22
350
0.55
1.77
1.7
2.1
—
—
—
0
0
14
251
0.50
1.65
3.5
4.0
—
—
—
0
0
16
85
2.01
1.64
6.7
3.2
—
—
—
0
0
31
205
1.68
1.61
6.0
4.3
—
—
—
0
0
48
613
0.65
1.53
4.7
4.5
—
—
—
0
0
11
208
0.48
1.51
1.2
1.3
—
—
—
0
0
22
335
0.58
1.48
2.6
3.7
5.0
124.6
e6/l
2.75
17
244
10
192
0.48
1.43
2.2
2.8
2.4
2.5
mmol/l
—
10
166
9
41
2.29
1.40
2.0
1.2
—
—
—
0
0
5
110
0.43
1.20
3.2
4.2
2.2
75.8
ug/l
—
5
88
0
33
0.00
1.18
0.0
4.4
—
—
—
0
0
0
34
0.00
1.18
0.0
3.1
—
1.6
—
0
29
80
695
1.42
1.06
19.2
21.7
330.9
331.2
g/l
0.10
80
686
86
950
0.70
1.02
20.6
23.9
132.5
132.7
g/l
0.04
86
925
86
950
0.70
1.02
20.5
23.7
239.6
242.7
e9/l
0.15
86
915
86
950
0.70
1.02
20.4
23.6
30.0
30.4
pg
1.18
86
925
26
353
0.67
1.02
1.7
2.5
142.7
116.8
ug/l
0.20
26
313
86
949
0.70
1.01
20.5
23.7
90.4
91.5
fl
1.45
86
924
0
29
0.00
0.99
0.0
2.7
—
1.5
—
0
29
0
28
0.00
0.99
0.0
2.7
—
8.0
—
0
28
14
215
0.61
0.95
1.6
1.6
1.2
1.3
mmol/l
0.26
14
172
18
257
0.65
0.89
1.8
3.0
—
—
—
0
0
20
278
0.67
0.87
5.7
5.1
—
—
—
0
0
35
433
0.73
0.79
6.0
5.8
1.2
1.2
mmol/l
0.16
35
384
0
27
0.00
0.78
0.0
2.7
—
1.6
—
0
22
0
27
0.00
0.78
0.0
1.4
—
—
—
0
0
0
27
0.00
0.78
0.0
1.3
—
—
—
0
0
9
144
0.60
0.75
1.4
2.0
2.4
2.3
g/l
—
9
127
85
923
0.75
0.71
14.9
18.8
4.0
4.0
mmol/l
0.71
85
884
22
289
0.71
0.71
3.4
3.6
2.8
6.2
mg/mmol
1.09
12
172
84
913
0.76
0.70
15.8
19.0
76.5
79.8
umol/l
0.63
84
913
17
232
0.69
0.68
1.5
1.6
18.5
21.2
nmol/l
0.40
17
186
85
920
0.76
0.67
15.1
18.9
140.0
139.5
mmol/l
0.98
85
880
6
104
0.56
0.65
1.3
1.2
—
—
—
0
0
83
899
0.77
0.64
14.7
15.0
—
—
—
0
0
15
105
1.49
0.63
1.5
1.6
—
—
—
0
0
0
21
0.00
0.60
0.0
2.7
—
16.9
—
0
8
0
21
0.00
0.60
0.0
4.8
—
50.1
—
0
21
0
23
0.00
0.59
0.0
2.5
—
—
—
0
0
0
23
0.00
0.59
0.0
2.5
—
107.6
—
0
23
0
23
0.00
0.59
0.0
2.5
—
4.0
—
0
23
81
875
0.79
0.57
13.5
16.2
28.5
24.2
mg/l
0.53
64
710
6
37
1.65
0.56
1.7
1.4
—
—
—
0
0
9
131
0.66
0.55
3.9
4.0
1.0
1.0
mmol/l
—
9
118
7
109
0.62
0.51
1.6
1.3
—
—
—
0
0
5
82
0.59
0.47
14.0
6.7
2.0
1.2
mmol/l
—
5
77
35
408
0.80
0.47
8.9
9.0
1.7
1.3
inr
—
10
117
22
269
0.78
0.44
3.1
2.9
3056.5
510.0
mg/l
0.38
13
173
45
506
0.83
0.42
3.8
5.9
12.8
11.0
umol/l
0.53
45
467
0
15
0.00
0.41
0.0
1.4
—
—
—
0
0
0
15
0.00
0.41
0.0
1.7
—
—
—
0
0
0
16
0.00
0.41
0.0
2.3
—
5.6
—
0
16
0
16
0.00
0.41
0.0
1.4
—
—
—
0
0
0
17
0.00
0.41
0.0
2.7
—
58.5
—
0
17
0
17
0.00
0.41
0.0
1.7
—
35.4
—
0
12
0
18
0.00
0.40
0.0
1.4
—
—
—
0
0
15
190
0.76
0.39
9.0
5.5
—
—
—
0
0
34
389
0.83
0.38
1.8
1.9
79.4
94.2
pmol/l
0.88
18
170
9
122
0.72
0.37
9.9
6.1
4.9
5.0
kpa
—
9
114
9
122
0.72
0.37
9.9
6.1
12.8
11.3
kpa
—
9
114
10
73
1.40
0.36
1.7
3.4
73.0
70.0
e9/l
—
10
59
10
73
1.40
0.36
1.5
1.6
—
—
—
0
0
10
73
1.40
0.36
1.6
2.1
94.2
240.3
ng/l
—
10
62
6
87
0.67
0.34
6.3
3.1
65.1
66.3
g/l
—
6
77
6
45
1.35
0.34
3.8
4.6
—
—
—
0
0
19
229
0.80
0.34
6.7
7.5
—
—
—
0
0
25
291
0.82
0.33
4.8
2.3
—
—
—
0
0
7
98
0.70
0.32
1.4
1.3
—
—
—
0
0
21
177
1.22
0.30
2.4
3.1
1876.6
98.0
ng/l
0.57
15
143
8
62
1.31
0.28
4.9
3.2
—
—
—
0
0
12
148
0.79
0.26
3.0
3.1
0.9
0.8
mmol/l
0.22
12
136
5
39
1.29
0.23
6.4
3.0
4.5
4.3
pmol/l
—
5
33
12
145
0.81
0.22
1.5
1.9
—
—
—
0
0
5
42
1.20
0.21
2.2
2.5
—
—
—
0
0
0
11
0.00
0.21
0.0
1.2
—
—
—
0
0
0
11
0.00
0.21
0.0
2.5
—
0.7
—
0
6
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
2.2
—
—
—
0
0
0
10
0.00
0.21
0.0
2.8
—
—
—
0
0
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
0
12
0.00
0.21
0.0
1.7
—
32.2
—
0
12
0
12
0.00
0.21
0.0
1.8
—
—
—
0
0
0
13
0.00
0.21
0.0
1.8
—
4.1
—
0
13
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
2.3
—
88.8
—
0
13
0
14
0.00
0.20
0.0
1.1
—
46425.7
—
0
7
0
14
0.00
0.20
0.0
1.1
—
—
—
0
0
0
14
0.00
0.20
0.0
1.1
—
31.9
—
0
14
28
309
0.88
0.19
1.9
2.2
48.5
57.3
u/l
1.10
28
282
26
287
0.88
0.18
2.7
4.1
—
—
—
0
0
19
214
0.87
0.17
1.8
3.5
81.9
87.4
%
0.34
19
209
6
77
0.77
0.16
11.7
7.0
—
—
—
0
0
6
78
0.76
0.16
6.2
2.7
—
—
—
0
0
25
273
0.89
0.14
4.4
5.0
2.5
2.2
ug/l
0.16
25
237
38
357
1.09
0.13
5.5
4.0
—
—
—
0
0
7
66
1.06
0.08
2.0
3.1
9.3
9.7
g/l
—
7
58
6
70
0.85
0.08
1.8
1.4
—
—
—
0
0
8
76
1.06
0.07
4.9
5.7
24.6
24.5
mmol/l
—
8
70
7
83
0.83
0.07
1.3
1.6
—
—
—
0
0
8
91
0.87
0.07
2.1
2.4
—
—
—
0
0
10
110
0.90
0.05
8.9
6.5
95.5
95.1
%
—
10
105
23
240
0.95
0.04
1.6
2.0
3.1
3.3
mg/l
0.21
23
204
62
628
0.97
0.02
4.3
4.2
—
—
—
0
0
10
96
1.05
0.00
1.2
1.7
—
—
—
0
0
42
418
1.01
0.00
3.5
4.6
25.3
34.9
ng/l
0.66
32
326
34
336
1.02
0.00
3.6
3.3
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
8.6
—
0
6
5
51
0.98
0.00
2.8
2.5
2.5
1.3
%
—
5
51
0
6
0.00
0.00
0.0
1.0
—
12.3
—
0
6
0
6
0.00
0.00
0.0
3.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
2.3
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
3.1
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
7.0
—
0
5
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
0.00
0.0
2.4
—
—
—
0
0
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
0
9
0.00
0.00
0.0
2.6
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
9
0.00
0.00
0.0
1.0
—
—
—
0
0
7
76
0.92
0.00
4.6
3.5
—
—
—
0
0
0
9
0.00
0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
8
0.00
0.00
0.0
2.9
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
6.7
—
0
9
5
56
0.89
0.00
1.0
1.3
—
—
—
0
0

Mortality – FinRegistry

↥

Association

Association between endpoint AB1_OTHER_CESTODE and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have AB1_OTHER_CESTODE.

N-year risk Females Males
1 No data No data
5 No data No data
10 No data No data
15 No data No data
20 No data No data

Relationships between endpoints

↥

Index endpoint: AB1_OTHER_CESTODE – Other cestode infections

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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