Pseudopolyposis of colon

COLONPSEUDOP

ulcerative colitis: An inflammatory bowel disease involving the mucosal surface of the large intestine and rectum. It may present with an acute or slow onset and follows an intermittent or continuous course. Signs and symptoms include abdominal pain, diarrhea, fever, weight loss, and intestinal hemorrhage.

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Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 K51.4
  • Cause of death: ICD-10 K51.4

2 out of 7 registries used, show all original rules.

108

4. Check minimum number of events

None

108

5. Include endpoints

None

108

6. Filter based on genotype QC (FinnGen only)

108

Control definitions (FinnGen only)

Control exclude
K11_ENERCOLNONINF

Extra metadata

First used in FinnGen datafreeze
DF2
Parent code in ICD-10
K51
Name in latin
Pseudopolyposis coli

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 578 213 362
Only index persons 556 208 348
Unadjusted period prevalence (%)
Whole population 0.01 0.01 0.01
Only index persons 0.01 0.01 0.01
Median age at first event (years)
Whole population 49.37 48.91 49.79
Only index persons 49.04 48.02 49.65

-FinnGen-

Key figures

All Female Male
Number of individuals 108 50 58
Unadjusted period prevalence (%) 0.02 0.02 0.03
Median age at first event (years) 48.67 42.83 53.70

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
108
Matched controls
1080
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
K51.4
ICD-10 Finland
Inflammatory polyps
+∞
155.8
108
*
208
Kela drug reimbursment
Ulcerative colitis and Crohn's disease
+∞
128.0
96
*
A07EC02
ATC
mesalazine; oral, rectal
1587.9
115.8
93
*
K51.5
ICD-10 Finland
Left sided colitis
+∞
105.0
83
*
K51.9
ICD-10 Finland
Ulcerative colitis, unspecified
+∞
89.4
73
*
UJF30
NOMESCO Finland
Ileoscopy through colon
35.5
75.1
57
33
UJF32
NOMESCO Finland
Coloscopy
33.6
71.1
88
125
L04AX01
ATC
azathioprine; systemic
246.3
67.0
63
6
K51.3
ICD-10 Finland
Ulcerative (chronic) rectosigmoiditis
+∞
58.8
51
*
A07EA02
ATC
hydrocortisone; rectal
930.4
57.1
51
*
K51.8
ICD-10 Finland
Other ulcerative colitis
+∞
40.1
36
*
A07EA06
ATC
budesonide; oral, local oral
156.3
39.9
40
*
UJF45
NOMESCO Finland
Flexible sigmoidoscopy with biopsy
15.3
37.8
40
40
A07EC01
ATC
sulfasalazine; oral, rectal
14.1
33.1
36
37
H02AB07
ATC
prednisone; oral
11.2
33.1
46
67
K51.1
ICD-10 Finland
Ulcerative (chronic) ileocolitis
+∞
30.7
28
*
K51.0
ICD-10 Finland
Ulcerative (chronic) pancolitis
+∞
27.2
25
*
K50.9
ICD-10 Finland
Crohn disease, unspecified
+∞
25.0
23
*
K51
ICD-10 Finland
Ulcerative colitis
+∞
23.8
22
*
H02AB06
ATC
prednisolone; systemic
8.4
22.5
85
329
K51.2
ICD-10 Finland
Ulcerative (chronic) proctitis
+∞
21.6
20
*
326
Kela drug reimbursment
Adalimumab, golimumab, infliximab and ustekinumab (intestinal diseases)
+∞
20.5
19
*
A12AX
ATC
Calcium, combinations with vitamin D and/or other drugs
5.5
17.7
57
182
UJF14
NOMESCO Finland
Enteroscopy of ileoanal anastomosis
+∞
17.1
16
*
K50.1
ICD-10 Finland
Crohn disease of large intestine
+∞
17.1
16
*
L01BB02
ATC
mercaptopurine; oral
+∞
16.0
15
*
D94
ICPC
Chronic enteritis/ulcerative colitis
185.8
15.9
16
*
O99.6
ICD-10 Finland
Diseases of the digestive system complicating pregnancy, childbirth and the puerperium
+∞
13.8
13
*
UJF12
NOMESCO Finland
Enteroscopy through intestinal stoma
+∞
13.8
13
*
A07EA01
ATC
prednisolone; oral, rectal
+∞
13.8
13
*
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
4.6
13.7
49
164
56310
ICD-8 Finland
Chronic enteritis and ulcerative colitis, Ulcerative colitis
+∞
12.7
12
*
K50.8
ICD-10 Finland
Other Crohn disease
+∞
12.7
12
*
K50.0
ICD-10 Finland
Crohn disease of small intestine
+∞
11.7
11
*
K52.9
ICD-10 Finland
Noninfective gastroenteritis and colitis, unspecified
28.7
11.5
15
6
JFA15
NOMESCO Finland
Endoscopic polypectomy in colon
14.1
11.4
19
16
WX002
NOMESCO Finland
Sedation and analgesia
4.5
11.0
34
100
GD1AA
NOMESCO Finland
Thorax X-ray examination
3.9
11.0
65
302
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
4.8
10.1
27
70
TPH04
NOMESCO Finland
Cathetrisation of vein
4.0
9.8
37
125
J01MA02
ATC
ciprofloxacin; systemic
3.6
9.7
59
273
M07.5*K51.9
ICD-10 Finland
Arthropathy in ulcerative colitis
+∞
9.5
9
*
K56.6
ICD-10 Finland
Other and unspecified intestinal obstruction
20.8
9.2
13
7
P01AB01
ATC
metronidazole; oral, rectal
3.4
9.0
61
299
JN1AE
NOMESCO Finland
Ultrasound examination of upper part of abdomen
5.1
8.9
21
49
A07EC03
ATC
olsalazine; oral
+∞
8.4
8
*
A06AC01
ATC
ispaghula (psylla seeds); oral
3.6
8.2
36
133
L04AB02
ATC
infliximab; parenteral
85.7
7.5
8
*
JFH33
NOMESCO Finland
Total colectomy, mucosal proctectomy, ileoanal anastomosis and ileostomy
+∞
7.4
7
*
JFH30
NOMESCO Finland
Total colectomy, mucosal proctectomy and ileoanal anastomosis without ileostomy
+∞
7.4
7
*
WX302
NOMESCO Finland
Thoracal epidural anesthesy
10.4
7.0
13
14
JFG00
NOMESCO Finland
Closure of loop enterostomy without resection
74.0
6.5
7
*
JFG40
NOMESCO Finland
Revision of enterostomy or colostomy without laparotomy
74.0
6.5
7
*
Z93.2
ICD-10 Finland
Ileostomy status
+∞
6.3
6
*
JF1CG
NOMESCO Finland
Extensive MRI of small bowel
+∞
6.3
6
*
JN3AD
NOMESCO Finland
Abdominal CT examination
4.1
6.2
19
54

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
68
76
22.46
62.79
2.8
1.2
—
—
—
0
0
51
166
4.93
15.04
2.7
2.0
2.89
3.37
mg/l
0.69
41
144
83
408
5.47
14.07
13.8
5.6
0.58
0.56
e9/l
0.44
78
360
79
374
5.14
14.05
13.8
5.3
0.80
0.70
%
1.00
74
348
81
391
5.29
14.05
15.3
6.2
—
—
—
0
0
80
383
5.20
14.01
14.0
5.6
8.85
8.28
%
0.89
75
361
83
409
5.45
14.00
14.1
5.6
0.04
0.04
e9/l
0.28
78
359
84
421
5.48
13.78
14.5
6.1
0.19
0.18
e9/l
0.17
78
372
81
398
5.14
13.54
13.8
5.3
25.84
27.97
%
1.15
76
377
79
382
4.98
13.45
13.6
5.4
2.99
2.62
%
0.61
74
358
84
426
5.37
13.43
14.1
5.5
1.70
1.88
e9/l
1.63
78
381
80
393
4.99
13.28
13.0
5.2
59.86
58.15
%
0.79
74
373
86
499
4.55
10.16
15.4
9.4
4.37
4.13
e9/l
0.43
81
437
36
117
4.12
10.11
1.4
1.7
—
—
—
0
0
63
332
3.15
7.91
6.6
5.3
1.19
1.22
mmol/l
1.40
57
305
37
148
3.28
7.37
1.4
1.7
—
—
—
0
0
63
344
3.00
7.23
11.1
10.8
1.10
1.22
inr
0.67
21
106
21
60
4.10
6.84
3.8
2.2
12.73
10.27
g/l
1.66
21
53
64
371
2.78
6.28
7.4
6.5
1.20
1.22
mmol/l
0.89
52
320
27
100
3.27
5.98
2.3
2.4
20.30
25.37
%
1.33
20
89
13
21
6.88
5.58
1.8
1.1
—
—
—
0
0
10
11
9.88
5.41
4.1
2.8
3.15
3.82
e9/l
—
10
11
10
12
9.05
5.18
4.2
3.0
52.30
55.00
%
—
10
12
19
65
3.33
4.72
4.4
5.0
0.22
0.78
%
—
9
18
15
45
3.71
4.51
12.5
4.5
—
—
—
0
0
20
74
3.09
4.38
2.0
5.4
—
—
—
0
0
20
77
2.96
4.08
1.4
1.6
—
—
—
0
0
51
312
2.20
3.90
3.1
1.8
—
—
—
0
0
7
8
9.25
3.83
1.0
1.1
—
—
—
0
0
34
177
2.34
3.81
2.0
1.4
2.66
2.41
g/l
0.52
25
114
26
121
2.51
3.70
1.8
1.4
520.00
401.82
titre
—
8
22
18
69
2.93
3.69
5.3
4.8
0.31
0.90
%
—
8
21
6
6
10.48
3.54
1.0
1.2
—
—
—
0
0
13
42
3.38
3.50
4.5
2.1
91.03
176.40
ng/l
0.53
13
36
22
99
2.53
3.34
10.5
6.3
103.45
104.06
mmol/l
0.20
22
99
48
301
2.07
3.32
1.8
1.9
92.59
95.62
pmol/l
0.18
29
153
36
205
2.13
3.19
11.3
6.7
—
—
—
0
0
5
5
10.39
3.01
1.6
1.0
—
—
—
0
0
8
17
4.99
2.98
1.1
1.2
—
—
—
0
0
18
78
2.57
2.94
11.2
7.7
4.73
5.18
kpa
0.78
18
72
9
23
4.17
2.84
14.0
3.9
2.27
1.54
%
—
9
18
7
14
5.26
2.77
1.1
1.3
—
—
—
0
0
15
61
2.69
2.76
5.9
5.2
0.00
0.07
%
—
5
15
27
147
2.12
2.64
6.2
2.8
642.06
149.98
ng/l
0.49
16
99
33
194
2.01
2.63
5.8
4.4
—
—
—
0
0
8
20
4.23
2.62
2.5
3.7
—
—
—
0
0
23
118
2.21
2.60
2.6
1.6
—
—
—
0
0
17
77
2.43
2.53
11.8
7.7
2.76
0.92
mmol/l
—
10
61
35
214
1.94
2.49
2.5
3.3
7.40
7.40
ph
—
8
43
9
27
3.54
2.45
1.2
1.3
—
—
—
0
0
15
65
2.52
2.44
6.1
5.0
0.00
0.12
%
—
5
17
8
22
3.84
2.41
1.0
1.5
—
—
—
0
0
31
184
1.96
2.39
1.5
1.5
19.79
20.65
nmol/l
0.12
26
150
8
23
3.67
2.32
8.8
4.7
3.90
3.84
mmol/l
—
8
23
6
14
4.47
2.18
1.0
1.6
—
—
—
0
0
29
174
1.91
2.15
1.5
1.7
0.75
0.83
mg/l
0.14
23
142
32
199
1.86
2.13
1.8
2.0
—
—
—
0
0
103
937
3.14
2.07
33.0
13.5
73.29
76.91
umol/l
1.02
103
937
14
64
2.36
2.05
3.4
3.7
—
—
—
0
0
19
102
2.05
1.91
1.8
1.6
—
—
—
0
0
31
199
1.78
1.84
1.4
1.4
0.77
1.19
u/ml
—
6
63
71
572
1.70
1.83
5.0
3.7
—
—
—
0
0
10
43
2.46
1.64
1.4
1.2
—
—
—
0
0
38
267
1.65
1.62
2.8
2.1
—
—
—
0
0
6
22
2.83
1.45
1.7
1.1
—
—
—
0
0
18
105
1.86
1.44
4.1
6.0
0.98
0.99
mmol/l
0.04
18
96
7
29
2.51
1.42
1.3
1.1
—
—
—
0
0
32
223
1.62
1.39
3.1
3.7
—
—
—
0
0
6
23
2.70
1.38
2.5
1.1
—
—
—
0
0
37
270
1.56
1.32
3.2
3.0
2.33
2.35
mmol/l
0.71
32
241
10
48
2.19
1.32
2.9
2.1
—
—
—
0
0
8
35
2.39
1.30
15.6
6.3
—
—
—
0
0
19
117
1.76
1.29
1.4
1.3
—
—
—
0
0
7
32
2.27
1.10
14.4
3.8
—
—
—
0
0
39
299
1.48
1.09
3.9
3.4
45.23
33.88
ng/l
0.22
25
201
87
785
1.56
1.01
4.7
4.5
1.58
1.89
mu/l
1.94
76
724
0
28
0.00
0.99
0.0
1.4
—
—
—
0
0
74
649
1.45
0.97
3.9
4.0
14.99
14.69
pmol/l
0.42
66
597
7
37
1.95
0.96
4.9
2.1
0.57
0.66
%
—
7
37
11
63
1.83
0.94
3.4
8.0
—
—
—
0
0
29
219
1.44
0.86
4.3
2.3
—
—
—
0
0
7
121
0.55
0.84
1.4
1.4
—
—
—
0
0
30
229
1.43
0.84
6.0
3.3
0.00
0.00
estimate
—
10
86
84
763
1.45
0.83
32.8
14.0
14.60
14.48
%
0.08
84
754
8
47
1.76
0.82
1.1
1.0
—
—
—
0
0
8
48
1.72
0.80
1.1
3.4
4.84
4.56
pmol/l
—
8
40
0
26
0.00
0.79
0.0
1.3
—
—
—
0
0
0
26
0.00
0.79
0.0
1.3
—
—
—
0
0
30
371
0.74
0.69
2.0
2.6
—
—
—
0
0
99
942
1.61
0.66
27.5
11.1
—
—
—
0
0
5
29
1.76
0.64
1.4
1.0
—
—
—
0
0
5
30
1.70
0.62
2.0
1.6
—
—
—
0
0
8
51
1.61
0.62
1.3
1.3
—
—
—
0
0
0
22
0.00
0.60
0.0
1.3
—
—
—
0
0
8
54
1.52
0.59
1.9
1.1
298.25
201.69
u/ml
—
8
49
13
90
1.51
0.58
1.7
1.4
—
—
—
0
0
87
819
1.32
0.49
4.0
4.1
5.79
5.85
mmol/l
0.20
77
756
7
47
1.52
0.48
9.9
9.9
0.59
0.71
%
—
7
47
7
47
1.52
0.48
9.9
9.9
0.94
1.36
%
—
7
47
13
95
1.42
0.46
3.5
2.3
11.62
14.80
nmol/l
0.67
13
90
7
50
1.43
0.46
1.0
1.3
160.43
311.77
mu/l
—
7
44
11
78
1.46
0.45
1.2
1.2
—
—
—
0
0
5
34
1.49
0.41
1.2
1.2
6.78
7.32
u/l
—
5
26
0
18
0.00
0.40
0.0
1.2
—
—
—
0
0
9
68
1.35
0.39
4.8
2.1
16.53
5.53
ug/l
—
9
60
10
74
1.39
0.33
5.1
3.0
—
—
—
0
0
7
51
1.40
0.32
4.1
3.8
—
7.41
—
0
6
24
205
1.22
0.31
3.9
3.6
4344.49
69.05
mg/l
0.77
18
137
15
183
0.79
0.30
6.7
3.3
—
—
—
0
0
84
805
1.20
0.27
5.5
5.1
39.05
39.16
mmol/mol
0.04
79
763
5
39
1.30
0.23
4.4
3.9
—
—
—
0
0
28
251
1.16
0.21
4.3
2.8
—
—
—
0
0
0
11
0.00
0.21
0.0
2.8
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
11
0.00
0.21
0.0
2.8
—
4.00
—
0
11
0
11
0.00
0.21
0.0
2.8
—
106.18
—
0
11
0
10
0.00
0.21
0.0
3.6
—
15.85
—
0
10
0
12
0.00
0.21
0.0
1.6
—
51.33
—
0
12
0
12
0.00
0.21
0.0
12.3
—
806.00
—
0
12
0
12
0.00
0.21
0.0
18.3
—
1194.75
—
0
12
12
99
1.24
0.20
1.3
1.2
—
—
—
0
0
14
118
1.21
0.20
1.2
1.6
—
—
—
0
0
87
843
1.16
0.20
3.9
3.7
1.33
1.30
mmol/l
0.14
80
779
5
65
0.76
0.17
1.2
1.2
—
27.50
—
0
6
18
161
1.14
0.14
3.3
2.0
4.16
4.11
e6/l
0.01
18
143
61
586
1.09
0.13
3.8
3.2
—
—
—
0
0
16
142
1.15
0.13
1.7
2.7
2.44
2.43
mmol/l
0.03
16
126
90
883
1.12
0.11
4.6
4.2
4.62
4.68
mmol/l
0.19
85
825
24
223
1.10
0.10
5.4
3.9
8.02
9.93
mg/mmol
0.10
17
145
5
43
1.17
0.10
2.6
6.1
24.96
25.11
mmol/l
—
5
43
44
422
1.07
0.09
5.3
3.3
0.00
0.00
estimate
-0.00
11
80
9
85
1.06
0.07
1.8
1.5
—
—
—
0
0
41
421
0.96
0.04
5.6
3.2
0.00
0.01
estimate
0.49
12
90
90
891
1.06
0.03
4.8
4.6
2.76
2.82
mmol/l
0.20
83
828
41
418
0.97
0.02
6.7
4.5
0.00
0.00
estimate
-0.00
11
87
10
103
0.97
0.00
1.5
1.8
—
—
—
0
0
15
147
1.02
0.00
1.1
1.3
1.21
7.78
u/ml
—
7
64
22
223
0.98
0.00
3.3
2.4
—
—
—
0
0
23
233
0.98
0.00
1.3
1.5
—
—
—
0
0
88
879
1.01
0.00
4.4
4.1
1.41
1.42
mmol/l
0.04
82
818
0
7
0.00
0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
5
55
0.90
-0.00
2.0
1.7
—
—
—
0
0
6
64
0.93
-0.00
1.2
1.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
120.33
—
0
6
5
58
0.86
-0.00
7.8
3.5
—
—
—
0
0
6
65
0.92
-0.00
1.3
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint COLONPSEUDOP and mortality.

Females

No data

Males

Parameter HR [95% CI] p-value
COLONPSEUDOP 1.439 [1.04, 2.0] 0.029
Birth year 0.987 [0.98, 1.0] 0.006

During the follow-up period (1.1.1998 — 31.12.2019), 56 out of 325 males with COLONPSEUDOP died.

Mortality risk

Mortality risk for people of age

years, who have COLONPSEUDOP.

N-year risk Females Males
1 No data 0.245%
5 No data 1.514%
10 No data 3.885%
15 No data 7.248%
20 No data 12.735%

Relationships between endpoints

Index endpoint: COLONPSEUDOP – Pseudopolyposis of colon

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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