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This is a non-core endpoint: only basic statistics are computed.

See its core counterpart C3_PALATE_EXALLC for full statistics.

Malignant neoplasm of palate

C3_PALATE

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Cause of death: ICD-10 C05
  • Cause of death: ICD-9 145[2-3]
  • Cause of death: ICD-8 1451
  • Cause of death: excluded ICD-9 145[2-3]
  • Cancer registry: Topography ICD-O-3 C05
  • Cancer registry: Morphology ICD-O-3 ANY
  • Cancer registry: Behaviour codes 3

2 out of 7 registries used, show all original rules.

84

4. Check minimum number of events

None

84

5. Include endpoints

None

84

6. Filter based on genotype QC (FinnGen only)

84

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
5
First used in FinnGen datafreeze
DF9

Similar endpoints

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 84 36 48
Unadjusted period prevalence (%) 0.02 0.01 0.02
Median age at first event (years) 65.31 65.72 64.99

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
77
Matched controls
771
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
C05.1
ICD-10 Finland
Malignant neoplasm: Soft palate
+∞
46.7
40
*
EHB00
NOMESCO Finland
Excision of lesion of palate
+∞
33.9
30
*
504
Kela drug reimbursment
Conditions requiring daily forced enteral nutrition
215.7
28.8
28
*
8070/3-C05.1
ICD-O-3
Squamous cell carcinoma, NOS, of soft palate, NOS
+∞
25.4
23
*
C05.0
ICD-10 Finland
Malignant neoplasm: Hard palate
+∞
24.2
22
*
JDB10
NOMESCO Finland
Percutaneous gastrostomy
77.0
23.9
26
5
EN1BD
NOMESCO Finland
Very extensive CT examination of mouth and soft tissues of neck
107.3
22.1
23
*
EHA10
NOMESCO Finland
Biopsy of palate
68.4
21.7
24
5
130
Kela drug reimbursment
Malignant tumour
12.0
16.7
33
45
WZC10
NOMESCO Finland
Extensive specialist consultion with written report
22.6
16.6
24
15
EEB00
NOMESCO Finland
Partial excision of maxilla
183.4
15.0
15
*
EP1AE
NOMESCO Finland
Neck ultrasound examination
16.7
14.3
23
19
WF002
NOMESCO Finland
Radical radiotherapy
13.7
14.1
25
26
WZC05
NOMESCO Finland
Specialty-specific consultation based on referral by dentist or doctor
22.0
13.9
20
12
GBB00
NOMESCO Finland
Tracheostomy
35.7
13.6
17
6
R4190
NOMESCO Finland
Nutritional therapy
20.3
13.5
20
13
K08.1
ICD-10 Finland
Loss of teeth due to accident, extraction or local periodontal disease
8.2
11.6
28
50
PJD81
NOMESCO Finland
Excision of lymph nodes from upper part of neck
38.5
10.7
13
*
8070/3-C05.9
ICD-O-3
Squamous cell carcinoma, NOS, of palate, NOS
+∞
10.7
10
*
SBB10
NOMESCO Finland
Teeth copy
11.6
10.3
19
21
N02AA05
ATC
oxycodone; systemic
6.0
9.9
31
78
EBA10
NOMESCO Finland
Surgical removal of tooth
9.2
9.9
21
30
GD1BD
NOMESCO Finland
Thorax extensive CT-examination
13.3
9.9
17
16
EP1CG
NOMESCO Finland
Extensive MRI examination of soft tissue of neck with high intesity magnet
25.6
9.7
13
6
C03.0
ICD-10 Finland
Malignant neoplasm: Upper gum
113.4
9.6
10
*
YA1BD
NOMESCO Finland
Extensive CT examination of head and neck for dose design of radiotherapy
113.4
9.6
10
*
ZZQ00
NOMESCO Finland
Free microvascular graft of skin
113.4
9.6
10
*
YA1VG
NOMESCO Finland
MRI examination of head and neck with high intesity magnet for dose design of radiotherapy
42.1
9.3
11
*
EB1HA
NOMESCO Finland
Panorama tomography of teeth and jaws or similar X-ray examination
4.5
9.2
51
232
R2130
NOMESCO Finland
Counselling and guidance which enhance independent living
9.3
9.2
19
26
UDQ12
NOMESCO Finland
Flexible laryngoscopy
11.1
9.1
17
19
SAA03
NOMESCO Finland
Extended examination of mouth
4.4
8.9
46
193
SPF20
NOMESCO Finland
Temporary soling for filling
56.7
8.9
10
*
C05.8
ICD-10 Finland
Malignant neoplasm: Overlapping lesion of palate
+∞
8.5
8
*
C05.9
ICD-10 Finland
Malignant neoplasm: Palate, unspecified
+∞
8.5
8
*
SAA04
NOMESCO Finland
Special inverstigation of mouth
13.9
8.5
14
12
WZC00
NOMESCO Finland
Planning of intervention or health care consultation
4.3
8.5
44
183
WX110
NOMESCO Finland
Local anesthesy
5.8
8.3
67
414
K08.2
ICD-10 Finland
Atrophy of edentulous alveolar ridge
25.2
8.3
11
5
EP1DG
NOMESCO Finland
Very extensive examination of soft tissue of neck with high intesity magnet
50.3
7.9
9
*
SBB00
NOMESCO Finland
Fotograf of mouth and teeth
15.5
7.7
12
9
GD1UA
NOMESCO Finland
Thorax X-ray examination outside radiological department
4.8
7.5
27
77
K13.79
ICD-10 Finland
Change in the oral mucosa UNS
18.0
7.5
11
7
A07AA02
ATC
nystatin; oral
8.5
7.5
16
23
8070/3-C05.0
ICD-O-3
Squamous cell carcinoma, NOS, of hard palate
+∞
7.4
7
*
GD1QA
NOMESCO Finland
Supine thorax X-ray examination
5.3
7.2
23
57
ZX012
NOMESCO Finland
Radiotherapy with large shaped fields - isocentric therapy
8.6
7.1
15
21
SBA00
NOMESCO Finland
Microbiological examinations
18.8
6.9
10
6
UJC01
NOMESCO Finland
Scopy of lower throat
44.1
6.9
8
*
WX408
NOMESCO Finland
General anesthesy, balanced
3.8
6.9
37
149
ZXE30
NOMESCO Finland
More than five and less than seven hours
10.2
6.9
13
15
A03FA01
ATC
metoclopramide; systemic, rectal
4.2
6.9
29
96
EJA10
NOMESCO Finland
Biopsy of tongue or floor of mouth
25.1
6.8
9
*
EBA15
NOMESCO Finland
Extraction of large number of teeth
14.0
6.8
11
9
WF003
NOMESCO Finland
Adjuvant radiotherapy
9.5
6.6
13
16
A06AD11
ATC
lactulose; oral
5.0
6.6
22
57
ZX090
NOMESCO Finland
Other technic of radiotherapy
10.7
6.6
12
13
K13.29
ICD-10 Finland
Indefinite leukoplakia
75.9
6.5
7
*
SPA00
NOMESCO Finland
Changing form of teeth in prepation for prothetic work
7.9
6.4
14
21
YA1CD
NOMESCO Finland
Very extensive CT examination of head and neck for dose design of radiotherapy
29.3
6.4
8
*
EN1AD
NOMESCO Finland
CT examination of mouth and soft tissues of neck
29.3
6.4
8
*
ENB00
NOMESCO Finland
Excision or exploration of lesion of pharynx
+∞
6.3
6
*
C04.1
ICD-10 Finland
Malignant neoplasm: Lateral floor of mouth
+∞
6.3
6
*
WB103
NOMESCO Finland
Simple adjuvant cytostatic therapy
9.9
6.3
12
14
N02AB03
ATC
fentanyl; nasal, sublingual, transdermal
11.4
6.3
11
11
WZC20
NOMESCO Finland
Multidisciplinary treatment meeting
8.0
6.0
13
19
WX402
NOMESCO Finland
General anaesthesia
4.0
6.0
26
87

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: C3_PALATE – Malignant neoplasm of palate

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).