This is a non-core endpoint: only basic statistics are computed.
See these related core endpoints for full statistics:
Melanoma in situ of scalp and neck
CD2_INSITU_MELANOMA_SCALPNECK
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
76 |
4. Check minimum number of eventsNone |
76 |
5. Include endpointsNone |
76 |
6. Filter based on genotype QC (FinnGen only) |
76 |
Control definitions (FinnGen only)
Controls for this endpoint are individuals that are not cases.
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF2
- Parent code in ICD-10
- D03
- Name in latin
- Melanoma in situ verticis cranii
Similar endpoints
↥List of similar endpoints to
Melanoma in situ of scalp and neck
based on the number of shared cases.
Similar with more cases:
- Melanoma in situ of scalp and neck
- Melanoma in situ
- Melanoma in situ
- Malignant melanoma
- Malignant melanoma, excluding all cancers (controls excluding all cancers)
Similar with less cases:
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 76 | 25 | 51 |
| Unadjusted period prevalence (%) | 0.02 | 0.01 | 0.02 |
| Median age at first event (years) | 70.48 | 71.86 | 69.80 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 70
- Matched controls
- 700
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
D03.4
ICD-10 Finland
Melanoma in situ of scalp and neck
+∞
100.6
70
*
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
55.1
42.4
57
51
L57.0
ICD-10 Finland
Actinic keratosis
9.1
12.9
30
53
TQX10
NOMESCO Finland
Biopsy of skin and subcutaneous tissue
8.8
12.3
29
52
8720/2-C44.9
ICD-O-3
Melanoma in situ of skin, NOS
142.5
11.8
12
*
D22.4
ICD-10 Finland
Melanocytic naevi of scalp and neck
52.4
11.4
13
*
QBE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin of trunk
9.9
10.2
21
29
R23.8
ICD-10 Finland
Other and unspecified skin changes
6.0
9.2
29
74
D22.9
ICD-10 Finland
Melanocytic naevi, unspecified
15.5
8.8
14
11
D48.5
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Skin
7.2
7.4
18
32
S18
ICPC
Laceration/cut
4.1
7.3
48
242
D04.3
ICD-10 Finland
Carcinoma in situ: Skin of other and unspecified parts of face
19.1
7.0
10
6
D03.31
ICD-10 Finland
Melanoma in situ in another or unspecified part of the face
25.4
6.9
9
*
8742/2-C44.9
ICD-O-3
Lentigo maligna of skin, NOS
76.5
6.5
7
*
QCE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in upper limb
29.6
6.4
8
*
QXA25
NOMESCO Finland
Destruction of lesion of skin, site unspecified
10.1
6.4
12
14
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: CD2_INSITU_MELANOMA_SCALPNECK – Melanoma in situ of scalp and neck
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).