Acne conglobata

L12_ACNE_CONGLOBLATA

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L70.1
  • Hospital discharge: ICD-9 7061E
  • Cause of death: ICD-10 L70.1
  • Cause of death: ICD-9 7061E

2 out of 7 registries used, show all original rules.

205

4. Check minimum number of events

None

205

5. Include endpoints

None

205

6. Filter based on genotype QC (FinnGen only)

205

Control definitions (FinnGen only)

Control exclude
L12_DISORDSKINAPPENDIX

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
L70
Name in latin
Acne conglobata

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 2189 621 1555
Only index persons 2136 611 1525
Unadjusted period prevalence (%)
Whole population 0.04 0.02 0.04
Only index persons 0.05 0.02 0.06
Median age at first event (years)
Whole population 21.34 25.74 19.47
Only index persons 21.13 25.47 19.39

-FinnGen-

Key figures

All Female Male
Number of individuals 205 92 113
Unadjusted period prevalence (%) 0.04 0.03 0.05
Median age at first event (years) 28.84 30.71 27.32

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
183
Matched controls
1829
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
L70.1
ICD-10 Finland
Acne conglobata
+∞
250.5
178
*
D10BA01
ATC
isotretinoin; oral
29.3
78.2
117
104
L70.0
ICD-10 Finland
Acne vulgaris
55.5
64.7
76
23
J01AA07
ATC
tetracycline; systemic
12.8
49.0
105
174
J01AA04
ATC
lymecycline; systemic
7.4
26.9
74
153
L73.2
ICD-10 Finland
Hidradenitis suppurativa
68.4
25.8
29
5
L70.9
ICD-10 Finland
Acne, unspecified
42.0
15.7
19
5
L02.2
ICD-10 Finland
Cutaneous abscess, furuncle and carbuncle of trunk
11.0
13.8
26
27
L72.1
ICD-10 Finland
Trichilemmal cyst
11.8
13.2
24
23
L70
ICD-10 Finland
Acne
11.3
12.4
23
23
J01FF01
ATC
clindamycin; systemic
3.7
12.4
65
239
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
7.6
10.8
25
37
S10
ICPC
Boil/carbuncle
7.5
10.3
24
36
L70.8
ICD-10 Finland
Other acne
42.6
10.1
12
*
L02.3
ICD-10 Finland
Cutaneous abscess, furuncle and carbuncle of buttock
16.2
9.7
15
10
L02.9
ICD-10 Finland
Cutaneous abscess, furuncle and carbuncle, unspecified
9.5
9.6
19
22
L02.4
ICD-10 Finland
Cutaneous abscess, furuncle and carbuncle of limb
11.6
9.5
17
16
D10AX03
ATC
azelaic acid; topical
4.3
9.4
36
99
H02AB06
ATC
prednisolone; systemic
2.6
8.5
83
443
E0001A1
ATC
NA
8.0
7.9
17
23
N05BA04
ATC
oxazepam; oral
3.0
7.8
49
197
QBE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin of trunk
7.0
7.6
18
28
L02.0
ICD-10 Finland
Cutaneous abscess, furuncle and carbuncle of face
10.0
7.4
14
15
E0000UV
ATC
NA
2.4
7.3
86
495
J01DB01
ATC
cefalexin; oral
2.9
7.1
155
1207
TQW99
NOMESCO Finland
Other minor procedure on skin
8.3
6.7
14
18
L02.8
ICD-10 Finland
Cutaneous abscess, furuncle and carbuncle of other sites
12.9
6.7
11
9
S96
ICPC
Acne
7.9
6.5
14
19
L71.0
ICD-10 Finland
Perioral dermatitis
18.8
6.3
9
5
380
Kela drug reimbursment
Adalimumab (hidradenitis suppurativa)
+∞
6.3
6
*
7061E
ICD-9 Finland
Diseases of sebaceous glands, Other acne[ACNE CONGLOBATA]
+∞
6.3
6
*
P01AB01
ATC
metronidazole; oral, rectal
2.3
6.2
67
364

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
39
147
3.04
8.05
1.9
1.5
—
—
—
0
0
118
757
2.32
7.94
10.6
5.7
0.6
0.5
e9/l
1.95
110
671
122
797
2.31
7.82
10.4
5.8
2.0
1.9
e9/l
0.55
115
721
116
757
2.23
7.26
10.8
5.7
0.0
0.0
e9/l
0.75
109
672
118
781
2.20
7.06
10.8
6.3
0.2
0.2
e9/l
0.21
111
706
126
874
2.15
6.47
13.5
8.9
4.2
4.1
e9/l
0.23
117
773
38
163
2.63
6.11
3.6
1.9
—
—
—
0
0
79
478
2.06
5.65
10.3
5.8
—
—
—
0
0
40
191
2.36
5.10
1.3
1.5
400.0
547.8
titre
—
10
36
12
28
4.49
4.89
1.7
2.9
—
—
—
0
0
107
754
1.88
4.68
5.0
5.3
6.6
6.5
mmol/l
0.06
94
680
185
1604
2.57
4.12
16.1
10.0
20.8
21.0
mg/l
0.03
153
1189
28
127
2.40
3.99
4.7
2.9
3729.6
4081.3
u/l
—
10
59
55
327
1.93
3.95
2.0
1.6
1.4
1.4
mmol/l
0.26
50
284
65
413
1.84
3.79
2.1
1.6
92.0
96.4
pmol/l
0.40
45
215
55
333
1.89
3.72
2.1
2.1
186.4
239.9
u/l
0.25
50
322
56
344
1.86
3.61
10.7
6.4
—
—
—
0
0
54
334
1.84
3.39
5.2
2.9
7.4
7.4
ph
0.23
13
59
14
48
3.06
3.37
2.5
3.6
0.6
0.2
g/l
—
8
28
60
385
1.79
3.34
8.5
4.4
—
—
—
0
0
94
693
1.66
3.13
2.9
2.5
100.2
83.6
ug/l
0.49
86
642
49
302
1.82
3.10
2.3
2.0
2.9
2.8
mg/l
0.16
44
253
7
12
6.00
3.04
6.9
1.4
—
—
—
0
0
133
1077
1.67
3.02
5.2
3.3
12.6
8.2
mm/h
2.34
127
994
131
1057
1.66
3.02
9.3
6.3
75.3
75.7
u/l
0.05
125
985
16
65
2.59
2.87
2.7
1.3
—
—
—
0
0
20
91
2.33
2.84
1.1
1.1
—
—
—
0
0
44
274
1.77
2.67
2.4
2.5
149.4
134.5
ug/g
0.11
33
208
7
15
4.79
2.62
6.0
2.4
5.2
6.9
mmol/l
—
7
15
20
95
2.22
2.59
5.9
5.0
0.9
0.6
%
—
7
19
5
7
7.28
2.56
1.2
1.0
—
—
—
0
0
7
17
4.22
2.38
6.0
2.2
1.2
1.4
mmol/l
—
7
17
20
100
2.11
2.30
18.3
14.1
1.0
1.1
inr
—
6
18
87
670
1.52
2.22
16.0
8.4
0.0
0.0
e9/l
0.00
73
541
56
391
1.59
2.20
2.4
1.4
2.8
2.2
g/l
0.93
34
230
30
177
1.81
2.17
1.6
2.6
2.4
2.4
mmol/l
0.07
25
160
57
402
1.58
2.14
3.1
2.9
16.5
32.6
ng/l
0.79
23
205
18
89
2.12
2.13
5.8
11.1
—
—
—
0
0
42
276
1.66
2.09
4.5
4.3
—
—
—
0
0
36
227
1.71
2.09
1.5
1.4
20.5
19.6
nmol/l
0.12
36
198
5
10
5.09
2.08
1.8
1.3
2.0
1.7
mmol/l
—
5
10
20
105
2.00
2.04
6.9
5.3
1.3
0.8
%
—
10
33
19
98
2.03
2.03
7.1
5.5
0.1
0.1
%
—
10
28
16
77
2.17
2.02
8.0
3.0
1.2
1.2
mmol/l
0.17
16
66
32
198
1.73
1.98
1.4
1.5
—
—
—
0
0
19
99
2.01
1.98
1.3
1.3
—
—
—
0
0
26
156
1.76
1.79
1.1
1.3
—
—
—
0
0
9
36
2.57
1.76
2.0
1.7
3.0
0.8
ug/l
—
9
31
5
13
3.91
1.72
1.4
1.2
—
—
—
0
0
10
42
2.45
1.70
7.3
2.0
—
—
—
0
0
53
390
1.48
1.62
3.8
2.7
141.2
210.5
e6/l
0.13
41
293
163
1474
1.52
1.61
4.5
3.2
1.4
1.4
mmol/l
0.97
156
1371
17
93
1.90
1.57
7.7
5.7
0.0
0.1
%
—
7
25
7
27
2.65
1.53
1.1
1.2
—
—
—
0
0
12
58
2.14
1.52
7.3
21.7
—
—
—
0
0
42
298
1.51
1.52
4.0
3.0
—
—
—
0
0
6
21
2.91
1.51
1.3
1.9
—
—
—
0
0
40
282
1.52
1.49
4.9
3.8
6.1
16.7
mg/mmol
1.99
30
180
61
470
1.42
1.46
4.2
3.2
423.6
66.7
e6/l
0.43
43
310
17
96
1.84
1.44
4.9
3.8
2.4
1.9
mmol/l
0.47
11
76
59
453
1.42
1.44
1.5
1.3
0.6
2.1
u/ml
0.74
14
103
164
1498
1.47
1.41
4.8
3.4
2.7
2.8
mmol/l
1.37
158
1388
74
594
1.38
1.39
2.2
2.1
—
—
—
0
0
55
420
1.42
1.38
4.8
5.8
1.0
1.1
inr
1.72
19
151
19
113
1.75
1.37
7.1
14.4
0.0
1.2
mmol/l
0.53
14
88
25
161
1.63
1.36
2.2
2.5
4.6
9.2
umol/l
1.03
20
137
6
25
2.44
1.25
4.0
2.6
—
—
—
0
0
6
25
2.44
1.25
4.0
3.6
—
—
—
0
0
22
142
1.62
1.20
1.8
1.5
—
—
—
0
0
6
26
2.35
1.19
1.2
2.5
—
—
—
0
0
46
349
1.41
1.19
4.0
2.5
0.3
0.3
e6/l
0.05
33
248
17
267
0.60
1.18
1.2
1.3
—
—
—
0
0
41
310
1.40
1.08
2.0
1.6
—
—
—
0
0
7
33
2.16
1.06
4.1
3.9
5.3
3.8
e9/l
—
7
33
7
33
2.16
1.06
4.4
3.9
58.4
56.0
%
—
7
33
21
140
1.56
1.02
1.4
1.4
—
—
—
0
0
14
84
1.72
1.00
1.0
1.2
—
—
—
0
0
0
29
0.00
0.98
0.0
1.1
—
—
—
0
0
10
54
1.90
0.98
4.7
2.6
—
—
—
0
0
9
51
1.80
0.96
1.6
1.1
—
—
—
0
0
12
70
1.76
0.95
4.5
6.7
25.4
24.8
mmol/l
0.33
12
70
35
265
1.39
0.92
4.0
3.3
42.2
108.8
mg/l
1.60
30
178
6
28
2.18
0.92
1.2
1.2
—
—
—
0
0
6
28
2.18
0.92
1.0
1.0
—
—
—
0
0
40
310
1.36
0.92
3.4
2.5
347.2
3058.5
umol/l
0.79
32
281
43
339
1.34
0.89
4.8
2.7
1.0
1.0
kg/l
—
9
39
6
30
2.03
0.87
3.5
2.9
—
—
—
0
0
38
296
1.35
0.85
4.8
3.0
—
—
—
0
0
137
1259
1.27
0.83
6.3
3.9
39.0
37.8
mmol/mol
0.66
130
1181
0
24
0.00
0.79
0.0
5.8
—
—
—
0
0
0
24
0.00
0.79
0.0
2.9
—
—
—
0
0
6
33
1.84
0.79
2.0
1.6
—
—
—
0
0
8
48
1.69
0.79
1.0
1.2
—
—
—
0
0
41
327
1.32
0.79
3.6
2.5
—
—
—
0
0
21
150
1.45
0.77
1.4
1.2
—
—
—
0
0
62
526
1.26
0.75
2.5
1.8
—
—
—
0
0
14
93
1.54
0.71
7.7
4.0
—
—
—
0
0
5
26
1.95
0.71
4.0
2.7
5.8
5.0
kpa
—
5
26
5
26
1.95
0.71
4.0
2.7
8.5
9.2
kpa
—
5
26
79
697
1.22
0.66
4.0
2.9
0.0
0.0
estimate
0.00
15
140
108
983
1.21
0.65
4.9
3.7
—
—
—
0
0
12
175
0.67
0.63
2.3
1.9
—
—
—
0
0
28
219
1.32
0.63
2.9
3.1
8.1
686.4
ng/l
0.74
15
135
0
20
0.00
0.60
0.0
4.6
—
66.7
—
0
20
8
52
1.56
0.60
2.1
1.3
—
—
—
0
0
0
22
0.00
0.59
0.0
5.2
—
—
—
0
0
79
705
1.20
0.57
4.0
3.0
0.0
0.0
estimate
0.00
16
140
44
370
1.24
0.57
4.5
3.3
0.0
0.0
estimate
0.50
15
138
178
1714
1.29
0.56
14.5
8.9
—
—
—
0
0
22
169
1.34
0.56
1.4
1.3
—
—
—
0
0
6
38
1.60
0.55
1.3
1.9
1345.0
167.7
e6/l
—
6
31
6
38
1.60
0.55
1.0
1.8
3.2
8.4
e6/l
—
6
30
78
700
1.18
0.53
5.5
4.1
0.0
0.0
estimate
0.00
16
147
48
412
1.22
0.52
2.6
2.2
—
—
—
0
0
27
330
0.79
0.49
1.8
1.5
—
—
—
0
0
7
48
1.47
0.47
2.3
1.7
0.2
0.2
g/l
—
7
48
5
31
1.63
0.43
1.2
1.0
—
—
—
0
0
13
96
1.38
0.42
1.3
1.2
—
—
—
0
0
8
59
1.37
0.41
3.3
2.9
—
—
—
0
0
5
34
1.48
0.40
1.0
1.1
—
—
—
0
0
0
18
0.00
0.40
0.0
1.8
—
—
—
0
0
9
66
1.38
0.39
1.6
1.7
—
—
—
0
0
5
36
1.40
0.38
1.4
1.3
—
—
—
0
0
19
153
1.27
0.37
4.5
2.0
—
—
—
0
0
52
465
1.16
0.36
1.9
1.7
—
—
—
0
0
29
246
1.21
0.36
1.3
1.3
6.5
6.3
u/ml
0.01
12
101
6
43
1.41
0.35
12.5
5.6
—
—
—
0
0
6
89
0.66
0.33
1.2
1.7
—
—
—
0
0
7
57
1.24
0.29
2.9
1.5
—
—
—
0
0
11
85
1.31
0.28
6.4
2.5
—
—
—
0
0
17
140
1.23
0.28
6.8
2.2
—
—
—
0
0
12
95
1.28
0.27
2.2
2.2
—
28.9
—
0
6
65
603
1.11
0.26
2.7
2.1
—
—
—
0
0
9
73
1.24
0.26
1.1
1.2
—
—
—
0
0
96
911
1.10
0.25
2.8
2.8
—
—
—
0
0
42
382
1.13
0.24
2.1
1.8
—
—
—
0
0
22
192
1.16
0.22
4.0
1.9
—
—
—
0
0
0
11
0.00
0.21
0.0
1.0
—
—
—
0
0
0
11
0.00
0.21
0.0
1.0
—
0.2
—
0
5
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
12
0.00
0.21
0.0
1.4
—
—
—
0
0
0
12
0.00
0.21
0.0
6.6
—
12.2
—
0
12
0
13
0.00
0.21
0.0
1.1
—
0.2
—
0
8
22
193
1.16
0.20
4.0
1.9
—
—
—
0
0
15
127
1.20
0.20
1.2
1.3
13.4
109.6
iu/ml
—
5
51
21
184
1.16
0.20
4.1
1.9
—
—
—
0
0
57
536
1.09
0.18
1.5
1.6
—
—
—
0
0
13
152
0.85
0.17
1.1
1.3
—
—
—
0
0
7
88
0.79
0.15
1.0
1.1
—
—
—
0
0
21
191
1.11
0.12
4.1
1.9
—
—
—
0
0
21
191
1.11
0.12
3.3
1.9
—
—
—
0
0
24
257
0.93
0.09
1.4
1.3
11.4
20.6
iu/ml
—
5
80
6
55
1.09
0.09
1.0
1.1
—
—
—
0
0
6
56
1.07
0.08
1.3
1.1
—
—
—
0
0
5
65
0.76
0.08
1.6
1.3
—
—
—
0
0
7
83
0.84
0.07
3.9
2.0
—
—
—
0
0
10
89
1.13
0.07
1.3
1.4
—
—
—
0
0
37
356
1.05
0.05
4.4
2.4
—
—
—
0
0
162
1634
0.96
0.05
16.0
10.5
41.1
41.5
%
0.33
134
1367
17
164
1.04
0.00
1.1
1.1
—
—
—
0
0
10
96
1.04
0.00
7.9
2.9
—
—
—
0
0
14
136
1.03
0.00
4.6
3.2
—
—
—
0
0
140
1405
0.99
0.00
4.7
3.1
5.8
5.7
mmol/l
0.57
133
1286
42
422
0.99
0.00
3.3
2.6
—
—
—
0
0
32
318
1.01
0.00
1.9
2.1
0.6
0.8
mg/l
0.95
26
233
19
192
0.99
0.00
2.5
2.4
0.7
0.7
ug/l
0.08
12
98
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.6
—
—
—
0
0
0
7
0.00
0.00
0.0
1.1
—
7.3
—
0
7
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
6
67
0.89
0.00
8.0
10.8
—
—
—
0
0
0
7
0.00
0.00
0.0
10.6
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.1
—
1.5
—
0
7
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
0.00
0.0
2.3
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
0.00
0.0
2.3
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint L12_ACNE_CONGLOBLATA and mortality.

Females

No data

Males

Parameter HR [95% CI] p-value
L12_ACNE_CONGLOBLATA 2.188 [1.59, 3.01] < 0.001
Birth year 0.99 [0.98, 1.0] 0.035

During the follow-up period (1.1.1998 — 31.12.2019), 64 out of 1137 males with L12_ACNE_CONGLOBLATA died.

Mortality risk

Mortality risk for people of age

years, who have L12_ACNE_CONGLOBLATA.

N-year risk Females Males
1 No data 0.376%
5 No data 2.552%
10 No data 6.73%
15 No data 12.466%
20 No data 21.196%

Relationships between endpoints

Index endpoint: L12_ACNE_CONGLOBLATA – Acne conglobata

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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