This is a non-core endpoint: only basic statistics are computed.
Benign neoplasm: Floor of mouth
CD2_BENIGN_FLOOROFMOUTH_EXALLC
No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
|
1. Apply sex-specific ruleNone |
- |
2. Check conditionsNone |
|
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
2 out of 7 registries used, show all original rules. |
- |
4. Check minimum number of eventsNone |
- |
5. Include endpointsNone |
- |
6. Filter based on genotype QC (FinnGen only)None |
- |
Control definitions (FinnGen only)
- Control exclude
- C3_CANCER, C3_CANCER_WIDE
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF2
- Parent code in ICD-10
- D10
- Name in latin
- Neoplasma benignum basis oris
Similar endpoints
↥List of similar endpoints to
Benign neoplasm: Floor of mouth
based on the number of shared cases.
Similar with more cases:
- Benign neoplasm: Floor of mouth
- Benign neoplasm of mouth and pharynx
- Benign neoplasm of mouth and pharynx
- Benign neoplasms
- Benign neoplasms
Similar with less cases:
Case counts by codes
↥FinnGen case counts by registry codes:
No upset plot: script not run.
No upset table: script not run.
Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 129 | 70 | 59 |
| Unadjusted period prevalence (%) | 0.02 | 0.02 | 0.03 |
| Median age at first event (years) | 51.62 | 50.68 | 52.74 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 115
- Matched controls
- 1151
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
D10.2
ICD-10 Finland
Benign neoplasm: Floor of mouth
+∞
124.8
96
*
EJA10
NOMESCO Finland
Biopsy of tongue or floor of mouth
57.1
26.1
30
7
EJB30
NOMESCO Finland
Excision of lesion of floor of mouth
+∞
17.1
16
*
21030
ICD-8 Finland
Benign neoplasm of buccal cavity and pharynx, Floor of mouth
+∞
14.9
14
*
130
Kela drug reimbursment
Malignant tumour
+∞
11.7
11
*
EP1AE
NOMESCO Finland
Neck ultrasound examination
13.1
8.9
15
13
PJD71
NOMESCO Finland
Extended sparing excision of cervical lymph nodes
+∞
8.4
8
*
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
14.5
8.1
13
10
WZC00
NOMESCO Finland
Planning of intervention or health care consultation
3.5
7.8
44
174
ECA20
NOMESCO Finland
Biopsy of gingiva
85.4
7.5
8
*
C61
ICD-10 Finland
Malignant neoplasm of prostate
+∞
7.4
7
*
H02AB02
ATC
dexamethasone; systemic
19.3
6.4
9
5
116
Kela drug reimbursment
Prostate cancer
+∞
6.3
6
*
JN4KR
NOMESCO Finland
Whole body very extensive metabolic PET with CT
+∞
6.3
6
*
8140/3-C61.9
ICD-O-3
Adenocarcinoma, NOS, of prostate gland
+∞
6.3
6
*
ZX012
NOMESCO Finland
Radiotherapy with large shaped fields - isocentric therapy
+∞
6.3
6
*
JN4BD
NOMESCO Finland
Extensive body CT
8.8
6.0
12
15
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
28
107
3.07
5.78
4.9
5.6
1.0
1.0
mmol/l
0.17
23
96
81
539
2.35
5.15
9.3
6.9
4.4
4.3
e9/l
0.22
68
473
18
57
3.51
4.98
1.7
2.6
0.2
0.2
g/l
0.09
18
51
9
14
6.82
4.06
1.0
1.2
—
—
—
0
0
62
404
2.03
3.77
2.4
2.3
69.7
75.0
nmol/l
0.78
56
354
37
200
2.19
3.67
2.5
1.9
—
—
—
0
0
14
49
3.08
3.31
1.3
1.4
—
—
—
0
0
8
16
5.25
3.10
1.5
1.4
—
—
—
0
0
35
202
2.01
2.87
1.7
1.8
1.1
0.9
mg/l
0.23
22
154
12
42
3.05
2.83
1.6
1.5
—
—
—
0
0
58
399
1.82
2.79
3.9
3.8
—
—
—
0
0
24
123
2.17
2.67
1.8
1.5
—
—
—
0
0
25
138
2.01
2.30
2.5
2.5
13.6
14.0
umol/l
0.08
25
126
30
177
1.91
2.28
3.0
3.8
59.0
85.8
ng/l
0.25
22
134
57
410
1.70
2.24
2.0
1.9
86.7
95.4
pmol/l
0.90
34
205
9
30
3.15
2.19
1.4
1.6
—
—
—
0
0
74
575
1.67
2.14
6.5
3.9
6.4
6.8
mmol/l
1.12
68
517
43
289
1.73
2.14
3.8
2.0
2.4
2.3
mmol/l
0.70
36
243
5
10
5.15
2.09
1.0
1.1
—
—
—
0
0
9
32
2.94
2.04
1.4
1.6
—
—
—
0
0
7
21
3.46
1.99
2.0
2.4
199.7
191.7
%
—
7
21
11
45
2.58
1.99
3.5
4.5
25.6
25.1
mmol/l
0.13
11
39
5
12
4.29
1.84
2.0
3.0
—
—
—
0
0
37
249
1.68
1.81
5.1
2.7
0.4
0.4
e6/l
0.07
31
176
45
319
1.63
1.80
4.8
2.9
—
—
—
0
0
90
755
1.64
1.77
4.0
3.8
15.0
14.9
pmol/l
0.20
83
675
7
24
3.02
1.75
2.1
1.8
94.9
89.0
%
—
7
24
5
13
3.95
1.73
1.0
1.1
—
—
—
0
0
7
26
2.79
1.60
1.0
1.3
—
—
—
0
0
7
26
2.79
1.60
1.0
1.3
—
—
—
0
0
5
15
3.42
1.54
1.2
1.1
—
—
—
0
0
5
15
3.42
1.54
1.0
1.1
—
—
—
0
0
5
15
3.42
1.54
1.8
1.1
—
—
—
0
0
5
15
3.42
1.54
1.8
1.1
—
—
—
0
0
15
80
1.99
1.52
2.2
2.0
46.7
32.1
u/l
0.56
15
63
9
37
2.54
1.51
1.4
1.8
—
—
—
0
0
24
151
1.72
1.48
3.7
2.5
0.9
0.8
e6/l
0.09
11
81
16
89
1.91
1.45
3.6
3.1
—
—
—
0
0
106
945
1.68
1.44
5.4
4.4
1.9
1.9
mu/l
0.26
97
848
23
144
1.73
1.44
3.7
2.7
1.4
2.9
e6/l
—
10
75
112
1014
1.79
1.43
19.9
11.4
24.6
20.8
mg/l
0.65
95
758
28
189
1.61
1.34
1.6
1.6
825.0
1142.2
nmol/l
1.58
20
141
20
123
1.74
1.34
4.9
1.7
30.2
29.6
s
0.13
20
118
15
84
1.89
1.34
1.9
1.5
—
—
—
0
0
12
62
2.03
1.32
4.0
4.7
128.3
88.0
ng/l
0.49
12
57
107
963
1.65
1.32
18.9
10.2
79.8
80.8
ml/min/173m2
0.17
89
757
12
63
2.00
1.27
2.5
4.1
157.1
223.2
ng/l
0.37
12
54
6
26
2.37
1.20
2.7
2.8
—
—
—
0
0
10
51
2.04
1.14
1.0
1.0
—
—
—
0
0
53
428
1.40
1.06
9.3
5.3
1.2
1.2
mmol/l
0.08
47
369
9
46
2.03
1.06
1.9
1.8
—
—
—
0
0
110
1013
1.58
1.04
4.2
4.4
6.2
6.0
mmol/l
0.85
96
913
14
84
1.75
1.02
2.1
1.5
—
—
—
0
0
117
1099
1.69
0.93
11.1
8.4
29.0
26.4
u/l
0.44
112
1057
6
28
2.20
0.93
1.3
1.1
—
—
—
0
0
116
1090
1.64
0.89
22.6
12.8
78.6
78.5
umol/l
0.02
116
1090
14
89
1.64
0.85
1.6
2.6
3.3
7.5
ug/l
1.99
14
74
49
407
1.33
0.79
3.2
3.6
22.8
43.0
ng/l
1.17
35
272
0
27
0.00
0.78
0.0
1.3
—
—
—
0
0
6
34
1.80
0.77
1.2
1.2
—
—
—
0
0
5
23
2.22
0.77
1.0
1.2
—
—
—
0
0
5
26
1.96
0.71
2.0
1.3
—
—
—
0
0
34
271
1.35
0.71
3.5
2.3
351.3
9172.4
umol/l
1.53
28
237
14
94
1.55
0.70
3.6
1.6
387.4
360.1
nmol/l
0.31
14
84
15
104
1.50
0.66
18.3
5.6
102.3
104.2
mmol/l
0.71
15
99
8
50
1.64
0.62
25.0
4.6
24.8
25.0
mmol/l
—
8
50
0
22
0.00
0.60
0.0
2.3
—
—
—
0
0
8
53
1.54
0.59
1.0
1.4
—
—
—
0
0
6
36
1.70
0.57
1.7
1.6
37.3
41.1
nmol/l
—
6
36
9
59
1.56
0.56
2.8
3.4
1.2
1.2
mmol/l
—
9
49
7
45
1.59
0.50
25.0
8.0
1.7
1.5
%
—
7
45
23
183
1.31
0.49
1.2
1.3
0.8
14.4
u/ml
—
5
83
33
389
0.80
0.49
3.6
3.6
—
—
—
0
0
72
658
1.21
0.47
2.8
3.0
—
—
—
0
0
77
709
1.21
0.46
2.7
2.9
45.3
48.8
u/l
0.21
70
669
18
140
1.33
0.45
1.3
1.4
—
—
—
0
0
111
1064
1.31
0.43
4.8
4.8
2.8
2.8
mmol/l
0.08
100
975
8
57
1.43
0.43
2.8
2.2
0.9
1.3
%
—
8
57
0
18
0.00
0.40
0.0
1.4
—
—
—
0
0
40
350
1.21
0.40
5.0
3.6
2.2
1.9
ug/l
0.32
33
313
16
126
1.31
0.37
4.9
4.1
26.1
30.2
%
—
10
79
24
204
1.22
0.31
3.4
2.3
0.7
0.8
ug/l
0.06
16
123
14
113
1.27
0.28
12.2
7.1
—
—
—
0
0
21
179
1.21
0.27
1.3
1.5
—
—
—
0
0
81
770
1.14
0.26
4.1
3.9
11.9
11.0
mm/h
0.31
75
701
101
975
1.17
0.25
5.4
5.8
41.3
40.1
mmol/mol
0.50
93
907
107
1039
1.17
0.23
4.1
4.4
4.7
4.7
mmol/l
0.04
97
963
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
0
11
0.00
0.21
0.0
3.0
—
14.0
—
0
11
0
11
0.00
0.21
0.0
1.5
—
0.4
—
0
5
0
11
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.9
—
—
—
0
0
5
65
0.76
0.17
3.0
2.9
5.6
5.0
kpa
—
5
59
8
95
0.83
0.14
1.6
2.1
—
—
—
0
0
102
998
1.11
0.13
3.9
3.9
1.4
1.3
mmol/l
0.95
88
907
31
291
1.09
0.10
4.7
3.4
24.0
24.8
%
0.13
12
129
5
46
1.09
0.09
1.4
3.5
51.1
52.3
%
—
5
46
24
256
0.92
0.08
3.4
3.8
0.0
0.0
estimate
—
10
80
50
482
1.06
0.08
3.4
3.5
0.0
0.0
estimate
0.00
11
85
11
119
0.92
0.04
2.3
1.7
1.5
1.4
%
0.12
11
102
10
107
0.93
0.02
1.5
2.2
—
—
—
0
0
50
493
1.02
0.01
3.4
3.6
0.0
0.0
estimate
0.00
11
83
103
1034
0.98
0.00
4.3
4.3
1.4
1.5
mmol/l
0.83
91
950
29
291
1.00
0.00
1.4
1.6
1.6
1.4
mmol/l
0.27
24
248
49
486
1.01
0.00
5.1
4.9
0.0
0.0
estimate
0.00
11
83
5
58
0.86
0.00
1.4
1.3
—
—
—
0
0
0
5
0.00
0.00
0.0
3.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.4
—
16.7
—
0
8
0
5
0.00
0.00
0.0
3.0
—
—
—
0
0
11
110
1.00
0.00
1.9
1.7
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
2.1
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
2.1
—
—
—
0
0
0
7
0.00
0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: CD2_BENIGN_FLOOROFMOUTH_EXALLC – Benign neoplasm: Floor of mouth
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).