Other infiltrative disorders of skin and subcutaneous tissue

L12_OTHERINFILTRATIVESKIN

skin disease: Any deviation from the normal structure or function of the skin or subcutaneous tissue that is manifested by a characteristic set of symptoms and signs.

Suggest a new description

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L98.6
  • Cause of death: ICD-10 L98.6

2 out of 7 registries used, show all original rules.

170

4. Check minimum number of events

None

170

5. Include endpoints

None

170

6. Filter based on genotype QC (FinnGen only)

170

Control definitions (FinnGen only)

Control exclude
L12_OTHERSKINSUBCUTIS

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
L98
Name in latin
Aliae morbositates infiltrativae cutis et textus subcutanei

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1124 634 485
Only index persons 1034 597 437
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.01
Only index persons 0.02 0.02 0.02
Median age at first event (years)
Whole population 55.18 56.99 52.63
Only index persons 55.43 57.00 53.29

-FinnGen-

Key figures

All Female Male
Number of individuals 170 104 66
Unadjusted period prevalence (%) 0.03 0.04 0.03
Median age at first event (years) 56.48 55.95 57.32

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
154
Matched controls
1542
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
L98.6
ICD-10 Finland
Other infiltrative disorders of skin and subcutaneous tissue
+∞
84.3
73
*
L98.69
ICD-10 Finland
Other infiltrative disease of the skin and subcutaneous tissue
+∞
49.7
45
*
TQX10
NOMESCO Finland
Biopsy of skin and subcutaneous tissue
22.8
41.2
62
44
L98.60
ICD-10 Finland
Pseudolymphoma of the skin
+∞
24.6
23
*
L98.64
ICD-10 Finland
Benign lymphocyte infiltration into the skin [Jessner-Kanof]
+∞
15.9
15
*
QAA05
NOMESCO Finland
Incision for biopsy of skin of head or neck
33.6
14.2
18
6
L98.63
ICD-10 Finland
Lymphocytoma of the skin
+∞
13.7
13
*
L93.0
ICD-10 Finland
Discoid lupus erythematosus
+∞
12.7
12
*
R21
ICD-10 Finland
Rash and other nonspecific skin eruption
11.5
12.5
23
23
D07AC01
ATC
betamethasone; topical
3.3
11.1
78
362
L30.9
ICD-10 Finland
Dermatitis, unspecified
4.0
11.1
51
170
L98.9
ICD-10 Finland
Disorder of skin and subcutaneous tissue, unspecified
64.5
10.8
12
*
D07AD01
ATC
clobetasol; topical
4.5
10.3
39
108
D07AB08
ATC
desonide; topical
4.8
8.8
30
74
D07AC13
ATC
mometasone; topical
3.0
8.1
60
273
QBA99
NOMESCO Finland
Other local destruction of skin of trunk
47.4
7.8
9
*
L93.2
ICD-10 Finland
Other local lupus erythematosus
+∞
7.3
7
*
P01BA02
ATC
hydroxychloroquine; oral
4.6
7.3
25
62
D48.5
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Skin
5.7
6.9
19
37
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
4.1
6.6
25
69
117
Kela drug reimbursment
Leukaemia and other malignant diseases of the blood and bone marrow, and malignant diseases of the lymphatic tissue
7.2
6.2
14
21

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
31
49
7.51
19.58
1.4
1.2
—
—
—
0
0
46
171
3.32
10.02
1.7
1.4
471.4
457.0
titre
0.03
14
40
64
299
2.83
9.26
5.9
4.3
—
—
—
0
0
107
677
2.57
8.03
7.5
5.3
0.6
0.6
e9/l
0.89
95
587
106
680
2.48
7.54
7.6
5.4
0.0
0.0
e9/l
1.21
94
593
107
699
2.43
7.17
7.7
5.7
0.2
0.2
e9/l
1.10
97
623
106
697
2.38
6.89
7.7
5.3
1.9
1.9
e9/l
0.05
96
621
112
805
2.15
5.22
11.2
10.0
3.7
4.0
e9/l
1.04
101
709
34
170
2.25
3.94
1.2
1.2
—
—
—
0
0
128
1037
1.95
3.47
5.7
4.1
10.7
12.4
mm/h
1.07
122
949
78
546
1.79
3.40
2.6
2.0
—
—
—
0
0
45
267
1.93
3.30
4.6
3.7
275.4
157.2
ng/l
0.35
34
206
23
105
2.38
3.27
1.1
1.4
—
—
—
0
0
67
454
1.79
3.23
8.1
5.1
—
—
—
0
0
23
107
2.33
3.14
4.0
3.0
60.8
75.6
e9/l
1.20
16
84
36
204
1.97
3.00
2.6
1.9
29.3
29.7
s
0.17
36
199
30
159
2.08
3.00
1.2
1.5
—
—
—
0
0
55
361
1.77
2.90
3.2
2.8
6865.7
10638.1
umol/l
0.21
49
302
26
132
2.14
2.89
1.5
1.4
—
—
—
0
0
22
105
2.26
2.84
4.4
3.5
0.1
0.1
%
—
8
29
7
14
5.16
2.75
1.4
1.4
—
—
—
0
0
8
19
4.36
2.71
3.5
2.5
—
—
—
0
0
36
212
1.89
2.67
1.4
1.6
—
—
—
0
0
23
116
2.14
2.60
4.3
3.4
0.9
0.9
%
—
8
35
43
271
1.79
2.57
1.5
1.4
2.5
2.4
g/l
0.13
32
158
46
301
1.72
2.41
2.4
1.8
1.4
1.2
mg/l
0.15
40
235
52
354
1.68
2.36
6.5
4.2
—
—
—
0
0
60
425
1.64
2.33
4.2
3.0
42.0
49.7
e6/l
0.10
48
327
20
101
2.11
2.26
4.3
3.3
0.0
0.5
%
—
5
21
59
420
1.62
2.23
3.7
4.1
7.4
7.4
ph
—
6
73
20
102
2.09
2.21
4.0
3.5
0.0
0.0
%
—
5
26
80
615
1.57
2.18
11.6
8.8
0.0
0.0
e9/l
0.56
65
492
10
37
2.81
2.14
1.1
1.1
—
—
—
0
0
55
389
1.61
2.12
3.8
2.9
0.1
0.4
e6/l
2.83
40
289
7
20
3.60
2.08
1.1
1.1
—
—
—
0
0
29
174
1.80
2.03
1.3
1.4
—
—
—
0
0
7
21
3.43
1.98
1.4
1.2
—
—
—
0
0
9
33
2.82
1.96
1.1
1.2
—
—
—
0
0
5
11
4.65
1.95
2.4
1.1
—
—
—
0
0
17
86
2.09
1.93
2.5
3.0
—
—
—
0
0
46
319
1.61
1.91
3.0
3.5
—
—
—
0
0
7
22
3.27
1.90
6.7
3.1
52.1
57.3
%
—
7
22
8
28
2.95
1.89
1.0
1.1
—
—
—
0
0
66
500
1.52
1.86
4.6
3.6
353.0
73.2
e6/l
0.40
50
356
5
12
4.26
1.83
1.4
1.3
32.8
32.2
pg
—
5
12
17
88
2.04
1.82
1.4
1.7
1.4
1.5
g/l
0.10
17
76
18
96
1.98
1.78
1.1
1.2
—
—
—
0
0
114
976
1.51
1.73
5.0
4.1
—
—
—
0
0
5
14
3.65
1.62
2.0
2.3
—
—
—
0
0
21
123
1.81
1.60
12.5
6.2
1.2
1.3
mmol/l
0.19
21
117
29
187
1.66
1.59
2.1
2.2
24.1
22.2
%
0.31
23
160
17
93
1.92
1.58
1.9
2.6
—
—
—
0
0
77
621
1.44
1.52
7.2
5.8
1.2
1.2
mmol/l
0.13
71
563
84
689
1.43
1.51
5.4
4.9
0.0
0.0
estimate
0.00
12
131
6
22
2.79
1.44
7.8
2.9
4.5
5.0
e9/l
—
6
22
83
686
1.41
1.40
4.1
3.6
0.0
0.0
estimate
0.00
12
128
36
253
1.54
1.40
1.6
1.9
—
—
—
0
0
41
297
1.50
1.39
1.3
1.2
1.1
0.9
u/ml
0.15
12
86
6
23
2.67
1.38
1.0
1.2
—
—
—
0
0
6
23
2.67
1.38
1.3
1.2
—
—
—
0
0
17
98
1.82
1.37
4.6
4.0
—
—
—
0
0
48
362
1.45
1.33
7.2
7.8
—
—
—
0
0
28
188
1.59
1.32
2.5
1.7
—
—
—
0
0
9
44
2.10
1.29
4.7
3.5
3.8
3.9
mmol/l
—
9
39
34
243
1.50
1.22
1.2
1.3
45.3
41.0
iu/ml
0.06
13
77
83
698
1.37
1.22
4.2
3.7
0.0
0.0
estimate
0.00
11
130
11
57
1.99
1.20
4.2
3.9
—
—
—
0
0
6
26
2.35
1.19
1.3
1.2
3.8
3.5
mmol/l
—
6
20
6
26
2.35
1.19
3.7
2.2
—
—
—
0
0
119
1064
1.39
1.17
4.8
4.0
14.7
14.8
pmol/l
0.18
113
964
8
39
2.10
1.17
4.1
3.9
—
—
—
0
0
49
381
1.40
1.14
3.7
2.8
—
—
—
0
0
17
104
1.71
1.14
2.4
2.4
4.1
7.1
ug/l
1.24
12
91
131
1193
1.43
1.14
22.4
17.0
13.6
13.7
%
0.33
131
1175
70
578
1.36
1.13
3.3
2.6
152.2
115.3
ug/l
0.64
65
530
50
391
1.39
1.13
3.6
3.0
1472.3
251.1
mg/l
0.41
36
243
25
170
1.55
1.13
8.5
20.7
1.1
1.3
inr
—
8
24
19
121
1.64
1.11
1.6
1.7
—
—
—
0
0
20
132
1.58
1.02
2.4
1.5
—
—
—
0
0
11
61
1.86
1.01
1.0
1.1
—
—
—
0
0
5
23
2.21
0.98
3.8
2.5
5.3
5.1
kpa
—
5
23
5
23
2.21
0.98
3.8
2.5
8.9
8.3
kpa
—
5
23
66
551
1.32
0.97
10.7
7.9
1.3
1.2
inr
0.19
20
150
51
410
1.35
0.96
3.8
2.9
8.5
7.5
mmol/l
0.67
46
339
109
979
1.32
0.93
4.4
3.7
—
—
—
0
0
11
63
1.80
0.92
1.1
2.0
—
—
—
0
0
12
71
1.74
0.91
20.9
6.3
26.0
25.0
mmol/l
0.49
12
71
148
1399
1.45
0.84
20.2
13.5
22.4
21.7
mg/l
0.12
125
1097
92
817
1.27
0.81
7.0
4.5
6.3
6.7
mmol/l
1.54
92
754
6
34
1.79
0.77
1.0
2.3
—
—
—
0
0
16
108
1.53
0.77
2.8
3.3
—
—
—
0
0
33
415
0.75
0.76
4.1
3.7
—
—
—
0
0
5
24
2.12
0.75
2.6
7.8
—
—
—
0
0
7
41
1.74
0.71
3.0
5.5
22.7
186.5
mg/l
—
7
35
7
41
1.74
0.71
2.9
5.5
47.1
26.6
mg/l
—
7
35
50
419
1.27
0.69
4.8
3.7
16.6
13.0
mg/mmol
0.12
35
250
18
129
1.44
0.66
3.2
3.5
—
—
—
0
0
5
29
1.75
0.64
2.2
1.9
—
—
—
0
0
136
1286
1.29
0.62
5.5
4.8
2.1
1.9
mu/l
1.11
128
1172
5
30
1.69
0.62
1.4
2.1
19.8
35.1
umol/l
—
5
24
5
30
1.69
0.62
1.4
1.3
—
—
—
0
0
19
140
1.40
0.61
1.4
1.4
—
—
—
0
0
51
435
1.25
0.61
2.6
2.3
61.8
58.5
u/l
0.25
45
402
0
20
0.00
0.61
0.0
1.6
—
—
—
0
0
16
115
1.43
0.59
15.8
7.6
—
—
—
0
0
46
392
1.24
0.55
4.3
3.2
—
—
—
0
0
12
83
1.48
0.53
19.8
7.1
—
—
—
0
0
9
63
1.45
0.53
1.3
1.7
—
—
—
0
0
22
172
1.32
0.51
1.6
1.2
—
—
—
0
0
7
45
1.58
0.49
1.0
1.2
—
—
—
0
0
11
76
1.48
0.49
3.4
2.8
4.3
4.5
pmol/l
0.44
11
65
29
238
1.26
0.48
1.2
1.3
22.9
11.3
u/ml
0.34
16
84
128
1215
1.22
0.48
24.5
18.1
331.6
332.3
g/l
0.35
128
1209
19
241
0.76
0.47
3.5
2.9
0.6
0.7
ug/l
0.46
14
145
7
50
1.42
0.45
1.0
1.1
—
—
—
0
0
7
50
1.42
0.45
2.3
2.9
—
—
—
0
0
142
1468
0.80
0.43
16.5
12.6
—
—
—
0
0
0
15
0.00
0.41
0.0
1.1
—
2.8
—
0
9
0
16
0.00
0.41
0.0
1.2
—
—
—
0
0
0
17
0.00
0.41
0.0
2.5
—
—
—
0
0
6
43
1.41
0.35
1.0
1.3
—
—
—
0
0
124
1290
0.86
0.35
22.6
15.0
39.5
40.0
%
0.30
98
959
46
410
1.17
0.35
1.6
1.4
—
—
—
0
0
160
1568
1.35
0.33
27.3
20.1
4.5
4.5
e12/l
0.01
154
1528
6
47
1.29
0.32
1.2
1.7
—
—
—
0
0
160
1569
1.34
0.32
27.3
20.2
6.6
6.6
e9/l
0.05
155
1528
134
1383
0.85
0.32
5.0
4.5
5.8
6.0
mmol/l
1.82
126
1265
10
75
1.35
0.31
2.3
3.7
—
—
—
0
0
57
523
1.14
0.29
4.1
3.8
22.9
38.8
ng/l
1.21
39
371
48
440
1.13
0.25
3.7
2.9
—
—
—
0
0
5
38
1.33
0.23
1.2
1.2
8.3
5.7
u/l
—
5
33
37
335
1.13
0.23
1.9
1.5
24.8
22.0
nmol/l
0.61
32
280
10
79
1.28
0.23
23.2
8.5
25.5
24.7
mmol/l
—
10
74
5
40
1.26
0.22
2.0
1.6
26.8
39.2
nmol/l
—
5
40
5
42
1.20
0.21
1.0
1.4
—
—
—
0
0
0
11
0.00
0.21
0.0
18.7
—
1340.6
—
0
11
0
11
0.00
0.21
0.0
1.0
—
19.0
—
0
11
0
11
0.00
0.21
0.0
11.7
—
928.5
—
0
11
0
10
0.00
0.21
0.0
1.9
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
13
108
1.22
0.20
1.4
1.4
—
—
—
0
0
49
455
1.11
0.20
2.8
2.3
—
—
—
0
0
0
14
0.00
0.20
0.0
1.0
—
—
—
0
0
0
14
0.00
0.20
0.0
1.1
—
1.0
—
0
9
137
1400
0.89
0.19
4.7
4.3
1.4
1.5
mmol/l
1.07
131
1282
6
51
1.18
0.19
1.2
1.2
—
—
—
0
0
11
130
0.84
0.16
5.5
4.3
—
—
—
0
0
14
122
1.16
0.14
1.6
1.3
—
—
—
0
0
141
1433
0.91
0.14
5.5
4.9
2.7
2.8
mmol/l
0.38
133
1312
18
161
1.13
0.13
3.7
4.6
3.3
12.6
ug/l
2.03
12
132
58
555
1.07
0.12
2.7
1.9
93.2
98.0
pmol/l
0.46
29
253
21
193
1.10
0.10
1.3
1.2
—
—
—
0
0
139
1407
0.93
0.08
4.9
4.4
4.6
4.7
mmol/l
0.37
134
1297
14
127
1.11
0.08
1.3
1.4
—
—
—
0
0
133
1347
0.94
0.08
4.4
3.9
1.3
1.3
mmol/l
0.27
123
1221
9
83
1.09
0.07
1.1
1.2
—
—
—
0
0
9
86
1.05
0.07
1.4
1.2
—
—
—
0
0
51
497
1.04
0.04
2.5
2.9
—
—
—
0
0
12
111
1.09
0.04
10.2
3.6
—
—
—
0
0
26
253
1.03
0.01
1.5
1.7
1096.4
1175.9
nmol/l
0.19
19
189
36
362
0.99
0.00
5.8
3.9
0.0
0.0
estimate
0.00
12
127
16
155
1.04
0.00
2.1
1.9
—
—
—
0
0
0
6
0.00
0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
0.00
0.0
3.5
—
—
—
0
0
0
6
0.00
0.00
0.0
11.5
—
0.6
—
0
6
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
2.8
—
—
—
0
0
0
5
0.00
0.00
0.0
2.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.0
—
—
—
0
0
5
54
0.92
0.00
3.4
2.3
—
—
—
0
0
0
8
0.00
0.00
0.0
2.5
—
—
—
0
0
5
52
0.96
0.00
5.6
13.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
3.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
103.4
—
0
5
0
8
0.00
0.00
0.0
1.0
—
39.4
—
0
8
0
8
0.00
0.00
0.0
1.6
—
—
—
0
0
7
76
0.92
0.00
2.6
2.2
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint L12_OTHERINFILTRATIVESKIN and mortality.

Females

Parameter HR [95% CI] p-value
L12_OTHERINFILTRATIVESKIN 1.16 [0.89, 1.5] 0.264
Birth year 0.994 [0.99, 1.0] 0.159

During the follow-up period (1.1.1998 — 31.12.2019), 82 out of 583 females with L12_OTHERINFILTRATIVESKIN died.

Males

Parameter HR [95% CI] p-value
L12_OTHERINFILTRATIVESKIN 1.305 [0.99, 1.71] 0.055
Birth year 0.984 [0.97, 0.99] < 0.001

During the follow-up period (1.1.1998 — 31.12.2019), 86 out of 442 males with L12_OTHERINFILTRATIVESKIN died.

Mortality risk

Mortality risk for people of age

years, who have L12_OTHERINFILTRATIVESKIN.

N-year risk Females Males
1 0.082% 0.224%
5 0.767% 1.307%
10 1.624% 3.239%
15 3.128% 6.275%
20 5.646% 10.793%

Relationships between endpoints

Index endpoint: L12_OTHERINFILTRATIVESKIN – Other infiltrative disorders of skin and subcutaneous tissue

GWS hits: 1

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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