Slow fetal growth and fetal malnutrition

P16_SLOW_FETAL_GROWTH_FETAL_MALNUTRITION

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 P05
  • Cause of death: ICD-10 P05

2 out of 7 registries used, show all original rules.

218

4. Check minimum number of events

None

218

5. Include endpoints

None

218

6. Filter based on genotype QC (FinnGen only)

218

Control definitions (FinnGen only)

Control exclude
P16_DISORD_RELATED_LENGTH_GESTATION_FETAL_GROWTH

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
P0[5-8]
Name in latin
Crescentia tarda et malnutritio fetalis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 12946 6759 6182
Only index persons 6781 3568 3213
Unadjusted period prevalence (%)
Whole population 0.18 0.19 0.17
Only index persons 0.13 0.13 0.12
Median age at first event (years)
Whole population 0.01 0.00 0.00
Only index persons 0.00 0.00 0.00

-FinnGen-

Key figures

All Female Male
Number of individuals 218 135 83
Unadjusted period prevalence (%) 0.04 0.05 0.04
Median age at first event (years) 0.00 0.00 0.00

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
191
Matched controls
1910
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
P05.1
ICD-10 Finland
Small for gestational age
+∞
140.5
117
*
P07.3
ICD-10 Finland
Other preterm infants
+∞
92.4
81
*
P05.0
ICD-10 Finland
Light for gestational age
+∞
86.1
76
*
Z87.6
ICD-10 Finland
Personal history of certain conditions arising in the perinatal period
48.5
77.8
95
38
P07.11
ICD-10 Finland
Other low birth weight 1500-1999 g
+∞
35.5
33
*
P07.12
ICD-10 Finland
Other low birth weight 2000-2499 g
+∞
35.5
33
*
E34.31
ICD-10 Finland
Short stature, prenatal disorder
30.4
25.0
33
13
602
Kela drug reimbursment
Children's severe malnutrition
12.5
24.8
46
47
P00.0
ICD-10 Finland
Fetus and newborn affected by maternal hypertensive disorders
34.0
18.8
24
8
P22.0
ICD-10 Finland
Respiratory distress syndrome of newborn
+∞
16.9
16
*
P07.2
ICD-10 Finland
Extreme immaturity
+∞
16.9
16
*
P70.4
ICD-10 Finland
Other neonatal hypoglycaemia
13.5
16.2
28
24
JAB00
NOMESCO Finland
Division and ligature of inguinal hernia sac
12.9
13.7
24
21
P27.1
ICD-10 Finland
Bronchopulmonary dysplasia originating in the perinatal period
+∞
13.7
13
*
P01.5
ICD-10 Finland
Fetus and newborn affected by multiple pregnancy
150.2
13.6
14
*
WX722
NOMESCO Finland
PEEP
11.7
12.1
22
21
K40.9
ICD-10 Finland
Unilateral or unspecified inguinal hernia, without obstruction or gangrene
11.1
11.9
22
22
P59.0
ICD-10 Finland
Neonatal jaundice associated with preterm delivery
24.8
11.8
16
7
P07.1
ICD-10 Finland
Other low birth weight
+∞
11.6
11
*
H35.1
ICD-10 Finland
Retinopathy of prematurity
+∞
11.6
11
*
AA5HE
NOMESCO Finland
Brain ultrasound examination in a child
5.5
11.3
34
72
P07.10
ICD-10 Finland
Other low birth weight 1000-1499 g
+∞
10.5
10
*
P29.30
ICD-10 Finland
Delayed closure of the ductus arteriosus
52.4
8.8
10
*
P07.01
ICD-10 Finland
Extremely low birth weight 500-749 g
+∞
8.4
8
*
Z50.8
ICD-10 Finland
Care involving use of other rehabilitation procedures
3.9
8.2
34
100
Z3229
NOMESCO Finland
Other healthcare associate professional
3.3
8.1
44
159
RK312
NOMESCO Finland
NA
23.2
8.1
11
5
Z38.3
ICD-10 Finland
Twin, born in hospital
46.9
7.8
9
*
ZXE10
NOMESCO Finland
More than one and less than three hours
2.5
7.7
74
381
ZXD10
NOMESCO Finland
Scheduled procedure
2.4
7.7
87
491
R62.0
ICD-10 Finland
Delayed milestone
3.9
7.6
31
90
H01AC01
ATC
somatropin; parenteral
5.4
7.6
22
45
WX730
NOMESCO Finland
Conventional respirator
14.1
7.5
12
9
WW804
NOMESCO Finland
Transfer from treating institution to higher-Level care, accompanied by doctor
11.5
7.4
13
12
Z3231
NOMESCO Finland
Registered nurse
2.3
7.4
97
586
Z01.1
ICD-10 Finland
Examination of ears and hearing
2.6
7.3
58
270
NK6MA
NOMESCO Finland
Measurement of bone age from hand and elbow using X-ray
3.3
7.2
39
139
GD1AA
NOMESCO Finland
Thorax X-ray examination
2.5
6.9
64
320
R4110
NOMESCO Finland
Physiotherapy
2.5
6.8
65
329
Z3226
NOMESCO Finland
Physiotherapist
2.4
6.6
68
360
XF400
NOMESCO Finland
ECG with 12 standard connections
2.5
6.4
55
262
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
2.5
6.3
57
281
K40.3
ICD-10 Finland
Unilateral or unspecified inguinal hernia, with obstruction, without gangrene
+∞
6.3
6
*
WX408
NOMESCO Finland
General anesthesy, balanced
2.2
6.1
76
437
GD1UA
NOMESCO Finland
Thorax X-ray examination outside radiological department
2.8
6.1
39
159

Mortality – FinRegistry

Association

Association between endpoint P16_SLOW_FETAL_GROWTH_FETAL_MALNUTRITION and mortality.

Females

Parameter HR [95% CI] p-value
P16_SLOW_FETAL_GROWTH_FETAL_MALNUTRITION 6.474 [4.98, 8.41] < 0.001
Birth year 0.997 [0.99, 1.0] 0.407

During the follow-up period (1.1.1998 — 31.12.2019), 71 out of 6317 females with P16_SLOW_FETAL_GROWTH_FETAL_MALNUTRITION died.

Males

Parameter HR [95% CI] p-value
P16_SLOW_FETAL_GROWTH_FETAL_MALNUTRITION 3.741 [2.92, 4.79] < 0.001
Birth year 0.986 [0.98, 1.0] 0.005

During the follow-up period (1.1.1998 — 31.12.2019), 69 out of 5727 males with P16_SLOW_FETAL_GROWTH_FETAL_MALNUTRITION died.

Mortality risk

Mortality risk for people of age

years, who have P16_SLOW_FETAL_GROWTH_FETAL_MALNUTRITION.

N-year risk Females Males
1 0.569% 0.49%
5 3.842% 3.819%
10 8.574% 10.069%
15 17.236% 18.695%
20 30.123% 31.154%

Relationships between endpoints

Index endpoint: P16_SLOW_FETAL_GROWTH_FETAL_MALNUTRITION – Slow fetal growth and fetal malnutrition

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
Extremity
rg [CI]
Extremity
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
loading spinner Loading data