No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
3 out of 7 registries used, show all original rules. |
197 |
4. Check minimum number of eventsNone |
197 |
5. Include endpointsNone |
197 |
6. Filter based on genotype QC (FinnGen only) |
197 |
Control definitions (FinnGen only)
Controls for this endpoint are individuals that are not cases.
Extra metadata
- First used in FinnGen datafreeze
- DF7
Summary Statistics
↥-FinRegistry-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | |||
Whole population | 6411 | 3406 | 3003 |
Only index persons | 5160 | 2752 | 2408 |
Unadjusted period prevalence (%) | |||
Whole population | 0.09 | 0.10 | 0.08 |
Only index persons | 0.10 | 0.10 | 0.09 |
Median age at first event (years) | |||
Whole population | 10.33 | 10.28 | 10.38 |
Only index persons | 11.14 | 11.11 | 11.18 |
-FinnGen-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | 197 | 130 | 67 |
Unadjusted period prevalence (%) | 0.04 | 0.04 | 0.03 |
Median age at first event (years) | 29.76 | 28.41 | 32.38 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 174
- Matched controls
- 1737
LabWAS
↥Mortality – FinRegistry
↥Association
Association between endpoint K11_MAXIL_PROGN and mortality.
Females
No dataMales
No dataMortality risk
Mortality risk for people of age
years, who have K11_MAXIL_PROGN.N-year risk | Females | Males |
---|---|---|
1 | No data | No data |
5 | No data | No data |
10 | No data | No data |
15 | No data | No data |
20 | No data | No data |
Relationships between endpoints
↥Index endpoint: K11_MAXIL_PROGN – Maxillary prognathism
GWS hits: -