Onychogryphosis

L12_NAIL_GRYPHOSIS

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 L60.2
  • Hospital discharge: ICD-9 7038C
  • Hospital discharge: ICD-8 70305
  • Cause of death: ICD-10 L60.2
  • Cause of death: ICD-9 7038C
  • Cause of death: ICD-8 70305

2 out of 7 registries used, show all original rules.

92

4. Check minimum number of events

None

92

5. Include endpoints

None

92

6. Filter based on genotype QC (FinnGen only)

92

Control definitions (FinnGen only)

Control exclude
L12_DISORDSKINAPPENDIX

Extra metadata

Level in the ICD hierarchy
4
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
L60
Name in latin
Onychogryposis

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 1009 654 347
Only index persons 760 483 277
Unadjusted period prevalence (%)
Whole population 0.02 0.02 0.01
Only index persons 0.02 0.02 0.01
Median age at first event (years)
Whole population 55.13 56.57 52.13
Only index persons 52.59 53.62 50.79

-FinnGen-

Key figures

All Female Male
Number of individuals 92 59 33
Unadjusted period prevalence (%) 0.02 0.02 0.01
Median age at first event (years) 49.23 48.61 50.34

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
84
Matched controls
840
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
L60.2
ICD-10 Finland
Onychogryphosis
+∞
82.3
65
*
70305
ICD-8 Finland
Diseases of nail, Onychogryphosis
+∞
15.0
14
*
QDH00
NOMESCO Finland
Avulsion of toe nail
+∞
15.0
14
*
L84
ICD-10 Finland
Corns and callosities
16.1
10.2
16
12
L97
ICD-10 Finland
Ulcer of lower limb, not elsewhere classified
13.7
7.9
13
11
L60.0
ICD-10 Finland
Ingrowing nail
11.6
7.3
13
13
QDB10
NOMESCO Finland
Major dressing of wound of skin of lower limb
10.7
7.1
13
14
V03AE01
ATC
polystyrene sulfonate; oral
43.7
6.9
8
*
E10.4
ICD-10 Finland
Type 1 diabetes mellitus, With neurological complications
43.7
6.9
8
*
B35.1
ICD-10 Finland
Tinea unguium
7.3
6.9
16
26
L03.0
ICD-10 Finland
Cellulitis of finger and toe
6.8
6.5
16
28
PD4BC
NOMESCO Finland
Extensive arterigography of lower extremity with X-ray
75.3
6.5
7
*
E000001
ATC
NA
3.9
6.2
27
90
Z03.89
ICD-10 Finland
Observation for other suspected diseases and conditions
4.9
6.1
20
50
GD1QA
NOMESCO Finland
Supine thorax X-ray examination
4.5
6.1
22
61
SPAT1229
SPAT
Assessment of need for aid
6.1
6.1
16
31

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
26
87
3.77
6.90
3.7
1.6
—
—
—
0
0
53
291
2.94
6.02
2.0
1.8
89.6
97.8
pmol/l
0.64
28
144
21
69
3.65
5.65
13.0
4.5
—
—
—
0
0
14
35
4.54
5.39
10.0
3.8
—
—
—
0
0
43
228
2.66
4.99
2.9
2.3
—
—
—
0
0
21
75
3.33
4.95
1.6
1.5
—
—
—
0
0
43
235
2.56
4.61
9.1
5.0
—
—
—
0
0
37
188
2.62
4.61
4.5
4.3
—
—
—
0
0
17
57
3.43
4.39
4.6
3.2
—
—
—
0
0
16
52
3.51
4.33
3.6
2.4
5.4
4.4
kpa
0.64
16
52
49
292
2.45
4.29
11.7
9.2
1.1
1.2
inr
0.25
11
89
22
88
2.97
4.27
2.4
1.7
—
—
—
0
0
17
59
3.31
4.16
4.5
3.2
5.7
5.8
kpa
0.07
17
59
33
167
2.52
4.07
2.5
2.0
3.4
3.3
mg/l
0.08
33
142
21
85
2.91
3.98
16.5
4.2
1.1
1.0
mmol/l
0.58
21
75
18
69
3.00
3.74
2.7
1.5
—
—
—
0
0
68
488
2.51
3.71
5.9
4.4
—
5444.5
—
0
11
40
230
2.31
3.66
4.5
4.0
—
—
—
0
0
39
222
2.31
3.65
4.5
2.8
6.1
7.4
mmol/l
1.18
29
181
52
335
2.27
3.62
8.6
5.4
3.1
2.8
%
0.58
47
313
37
208
2.30
3.55
4.6
3.0
1723.6
72.2
mg/l
0.50
25
117
51
328
2.25
3.54
8.7
5.2
0.8
0.7
%
0.51
46
303
16
59
3.07
3.54
2.8
1.6
—
—
—
0
0
33
177
2.35
3.52
1.5
1.5
19.0
22.6
nmol/l
0.88
25
144
23
105
2.59
3.45
5.0
2.2
11.3
14.7
umol/l
1.64
23
98
52
340
2.22
3.43
9.1
5.7
8.7
8.5
%
0.22
47
318
38
220
2.24
3.37
6.2
3.7
19.0
11.9
mg/mmol
0.23
21
124
15
56
3.01
3.24
4.7
3.6
—
—
—
0
0
52
346
2.16
3.22
8.9
5.6
24.5
28.0
%
1.39
45
322
61
434
2.20
3.16
7.0
4.4
7.1
6.6
mmol/l
0.70
56
406
31
169
2.26
3.14
1.8
1.8
449.4
472.3
pmol/l
0.16
23
141
51
342
2.10
3.04
8.3
5.4
59.9
57.0
%
1.02
45
323
59
420
2.13
2.98
9.5
9.4
3.7
4.0
e9/l
0.62
52
358
19
85
2.56
2.95
1.2
1.2
—
—
—
0
0
66
494
2.19
2.88
6.8
4.4
—
—
—
0
0
22
109
2.34
2.75
4.1
1.9
—
—
—
0
0
13
50
2.86
2.66
14.4
7.4
—
—
—
0
0
9
25
3.87
2.65
1.3
1.2
—
—
—
0
0
52
365
1.98
2.60
8.6
5.6
0.2
0.2
e9/l
0.17
44
320
9
26
3.72
2.56
2.0
2.7
—
—
—
0
0
44
293
1.96
2.55
4.9
4.1
90.5
48.5
ng/l
0.46
28
205
10
36
2.99
2.28
1.2
1.4
—
—
—
0
0
44
302
1.88
2.26
2.0
1.9
—
—
—
0
0
5
9
5.80
2.24
1.6
1.6
—
—
—
0
0
25
142
2.04
2.22
2.3
1.8
1142.7
1287.0
nmol/l
0.33
19
113
22
120
2.10
2.17
2.5
2.8
0.8
0.8
mmol/l
0.28
22
111
49
352
1.84
2.15
8.7
5.3
0.0
0.0
e9/l
0.01
43
300
83
731
2.38
1.90
6.1
4.5
6.4
6.0
mmol/l
0.75
74
673
29
183
1.85
1.88
3.8
2.8
401.8
7732.3
umol/l
1.31
24
154
48
353
1.75
1.87
8.9
5.2
0.6
0.6
e9/l
0.00
42
299
10
42
2.55
1.74
1.2
1.5
—
—
—
0
0
30
196
1.79
1.73
4.7
2.6
0.8
0.3
e6/l
0.52
18
141
33
224
1.74
1.66
3.8
3.0
—
—
—
0
0
48
362
1.68
1.64
9.0
5.3
1.6
1.8
e9/l
0.68
42
317
8
32
2.64
1.64
2.0
1.8
—
—
—
0
0
24
149
1.83
1.62
1.9
1.7
0.9
1.1
mg/l
0.19
19
119
6
21
2.98
1.53
1.8
4.0
—
—
—
0
0
85
771
2.35
1.48
25.2
13.4
—
—
—
0
0
15
82
1.99
1.46
9.1
5.9
4.9
5.0
kpa
0.22
15
77
13
68
2.06
1.41
3.1
3.1
2.1
1.8
%
0.34
13
57
29
199
1.67
1.38
4.9
2.5
—
—
—
0
0
80
710
1.97
1.37
9.0
5.6
42.0
40.5
mmol/mol
0.64
71
664
36
267
1.57
1.24
4.4
3.3
—
—
—
0
0
23
153
1.67
1.22
4.7
3.8
—
—
—
0
0
8
40
2.09
1.15
1.4
1.3
—
—
—
0
0
8
41
2.04
1.12
2.9
2.6
122.4
127.4
g/l
—
8
41
82
746
1.91
1.11
27.8
13.9
24.0
22.7
mg/l
0.16
72
575
65
559
1.55
1.09
6.1
3.9
16.5
12.0
mm/h
1.53
56
507
7
33
2.21
1.08
21.0
5.6
24.6
24.5
mmol/l
—
7
33
11
60
1.95
1.08
1.4
1.5
—
—
—
0
0
30
220
1.54
1.07
4.7
2.8
31.6
343.4
e6/l
0.53
18
166
9
47
2.01
1.06
14.3
7.0
0.7
0.7
%
—
9
47
9
48
1.97
1.04
14.3
7.0
1.4
1.7
%
—
9
48
66
574
1.53
1.01
4.7
4.0
14.8
14.9
pmol/l
0.04
57
518
10
54
1.96
1.01
1.1
1.4
—
—
—
0
0
43
344
1.47
1.00
4.8
3.7
0.0
0.0
estimate
—
9
68
87
819
2.14
0.96
37.5
20.6
252.7
250.7
e9/l
0.10
87
794
33
252
1.48
0.96
5.7
3.3
21.7
74.5
e6/l
1.45
19
172
82
754
1.81
0.95
5.9
5.0
2.7
2.8
mmol/l
0.18
73
689
26
190
1.51
0.93
1.6
1.3
—
—
—
0
0
26
190
1.51
0.93
4.3
3.9
0.0
0.0
estimate
—
9
64
43
353
1.41
0.84
5.0
3.7
0.3
0.0
estimate
—
9
62
10
58
1.81
0.83
6.2
4.0
—
—
—
0
0
13
82
1.68
0.83
10.4
5.9
94.6
95.6
%
0.19
13
77
6
32
1.93
0.83
2.0
2.3
—
—
—
0
0
87
820
2.12
0.83
37.5
20.6
4.3
4.5
e12/l
2.28
87
792
87
820
2.12
0.83
37.2
20.5
30.5
30.4
pg
0.42
87
807
87
820
2.12
0.83
37.3
20.5
92.6
91.3
fl
1.66
87
807
77
704
1.57
0.82
5.7
4.7
1.7
1.9
mu/l
0.86
68
641
9
54
1.74
0.77
1.4
3.8
—
—
—
0
0
42
348
1.38
0.76
7.2
4.9
0.0
0.0
estimate
—
9
68
7
40
1.81
0.73
3.1
2.4
0.9
1.2
%
—
7
40
7
40
1.81
0.73
1.4
1.6
1.5
1.2
g/l
—
7
34
72
655
1.46
0.72
21.1
14.3
36.7
40.2
%
1.53
48
483
33
268
1.36
0.66
3.6
3.1
2.4
2.4
mmol/l
0.54
28
231
22
170
1.39
0.59
4.3
7.1
—
—
—
0
0
6
37
1.66
0.57
22.7
7.4
—
—
—
0
0
8
57
1.44
0.43
2.9
5.8
21.6
25.0
mmol/l
—
8
52
19
151
1.33
0.43
4.8
4.0
1.0
1.0
kg/l
—
5
22
5
32
1.59
0.43
2.4
2.8
23.3
25.2
mmol/l
—
5
32
5
33
1.54
0.42
3.8
3.7
—
—
—
0
0
75
708
1.32
0.41
5.2
4.0
1.4
1.3
mmol/l
0.87
66
645
0
18
0.00
0.40
0.0
2.4
—
15.3
—
0
18
24
200
1.27
0.39
4.0
3.2
—
—
—
0
0
11
145
0.73
0.38
1.9
3.3
2.5
2.5
mmol/l
0.88
11
129
78
743
1.33
0.37
5.8
4.4
4.6
4.7
mmol/l
0.58
69
690
12
91
1.37
0.36
1.2
1.3
—
—
—
0
0
8
64
1.27
0.28
8.0
4.0
1.2
1.2
mmol/l
—
8
55
19
160
1.24
0.28
6.2
5.0
—
—
—
0
0
17
142
1.24
0.27
3.3
2.5
511.9
538.6
mosm/kgh2o
0.21
12
120
9
72
1.28
0.26
1.4
1.2
—
—
—
0
0
16
133
1.25
0.26
1.3
1.3
13.3
26.7
iu/ml
—
7
50
18
152
1.23
0.26
1.5
1.4
2.5
2.7
g/l
0.25
13
87
5
37
1.37
0.24
1.6
3.4
—
—
—
0
0
0
11
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
3.9
—
0
10
0
10
0.00
0.21
0.0
1.4
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
58
609
0.87
0.21
24.4
17.3
13.9
13.8
%
0.18
58
598
13
110
1.21
0.18
1.5
1.3
—
—
—
0
0
76
738
1.17
0.17
5.8
4.4
1.4
1.5
mmol/l
0.94
67
678
5
45
1.12
0.10
2.4
1.4
—
—
—
0
0
5
63
0.78
0.08
1.4
1.1
—
—
—
0
0
26
275
0.92
0.08
2.8
3.0
—
—
—
0
0
14
129
1.10
0.06
1.1
1.3
0.9
15.4
u/ml
—
5
45
32
316
1.02
0.00
16.5
10.1
0.0
0.0
e9/l
0.71
26
246
6
66
0.90
0.00
1.2
1.3
—
—
—
0
0
5
54
0.92
0.00
3.6
2.9
—
—
—
0
0
5
52
0.96
0.00
1.0
1.3
—
31.9
—
0
5
6
62
0.97
0.00
1.2
1.5
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.9
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
52
520
1.00
0.00
4.0
3.7
—
—
—
0
0
22
220
1.00
0.00
6.7
3.7
7.4
7.4
ph
—
8
43
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
2.1
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
6.7
—
0
7
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
209.2
—
0
6
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
2.0
—
33.1
—
0
8

Mortality – FinRegistry

Association

Association between endpoint L12_NAIL_GRYPHOSIS and mortality.

Females

Parameter HR [95% CI] p-value
L12_NAIL_GRYPHOSIS 1.729 [1.08, 2.77] 0.023
Birth year 0.996 [0.99, 1.0] 0.325

During the follow-up period (1.1.1998 — 31.12.2019), 85 out of 308 females with L12_NAIL_GRYPHOSIS died.

Males

Parameter HR [95% CI] p-value
L12_NAIL_GRYPHOSIS 1.993 [1.26, 3.15] 0.003
Birth year 0.984 [0.97, 0.99] 0.002

During the follow-up period (1.1.1998 — 31.12.2019), 60 out of 199 males with L12_NAIL_GRYPHOSIS died.

Mortality risk

Mortality risk for people of age

years, who have L12_NAIL_GRYPHOSIS.

N-year risk Females Males
1 0.15% 0.353%
5 0.942% 2.183%
10 2.462% 5.526%
15 4.902% 10.297%
20 8.73% 16.677%

Relationships between endpoints

Index endpoint: L12_NAIL_GRYPHOSIS – Onychogryphosis

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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