This is a non-core endpoint: only basic statistics are computed.
See its core counterpart C3_RECTUM_NEUROENDOCRINE_EXALLC for full statistics.
Neuroendocrine tumor and carcinoma of rectum
C3_RECTUM_NEUROENDOCRINE
No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
1 out of 7 registries used, show all original rules. |
124 |
4. Check minimum number of eventsNone |
124 |
5. Include endpointsNone |
124 |
6. Filter based on genotype QC (FinnGen only) |
124 |
Control definitions (FinnGen only)
Controls for this endpoint are individuals that are not cases.
Extra metadata
- First used in FinnGen datafreeze
- DF8
Similar endpoints
↥List of similar endpoints to
Neuroendocrine tumor and carcinoma of rectum
based on the number of shared cases.
Similar with more cases:
- Neuroendocrine tumor and carcinoma of rectum, excluding all cancers (controls excluding all cancers)
- Colorectal neuroendocrine tumor and carcinoma, excluding all cancers (controls excluding all cancers)
- Colorectal neuroendocrine tumor and carcinoma
- Colorectal cancer
- Colorectal cancer, excluding all cancers (controls excluding all cancers)
Similar with less cases:
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded from FinRegistry analyses (omitted endpoint).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 124 | 72 | 52 |
| Unadjusted period prevalence (%) | 0.02 | 0.02 | 0.02 |
| Median age at first event (years) | 56.48 | 53.92 | 60.03 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 113
- Matched controls
- 1131
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
8240/3-C20.9
ICD-O-3
Neuroendocrine tumor, NOS, of rectum, NOS
+∞
125.6
96
*
UJF45
NOMESCO Finland
Flexible sigmoidoscopy with biopsy
34.3
47.1
64
41
D12.8
ICD-10 Finland
Benign neoplasm: Rectum
27.8
32.3
45
26
C20.99
ICD-10 Finland
Malignant tumor of the rectum other or unspecified histology
254.7
21.3
21
*
D37.5
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Rectum
56.4
16.6
19
*
UJF32
NOMESCO Finland
Coloscopy
4.9
13.3
56
189
K62.1
ICD-10 Finland
Rectal polyp
132.8
11.6
12
*
E34.0
ICD-10 Finland
Carcinoid syndrome
+∞
10.6
10
*
UJF30
NOMESCO Finland
Ileoscopy through colon
5.6
9.3
28
62
D12.6
ICD-10 Finland
Benign neoplasm: Colon, unspecified
9.3
9.3
19
24
R10.4
ICD-10 Finland
Other and unspecified abdominal pain
3.3
7.9
54
245
C20.90
ICD-10 Finland
Malignant tumor of the rectum without histology
20.0
7.8
11
6
C20.91
ICD-10 Finland
Malignant tumor of the rectum invasive carcinoma
12.0
7.0
12
11
8249/3-C20.9
ICD-O-3
Neuroendocrine tumor, grade 2 of rectum, NOS
+∞
6.3
6
*
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
24
6
48.96
20.36
4.0
2.3
67.21
56.83
nmol/l
—
24
6
75
453
2.66
6.52
5.8
4.3
35.51
35.52
g/l
0.00
69
424
9
12
7.98
4.44
2.7
1.7
14.51
14.53
ug/l
—
9
12
53
345
1.94
3.14
5.5
3.3
2.37
2.35
mmol/l
0.59
48
297
15
58
2.80
3.00
5.1
6.0
24.47
25.11
mmol/l
0.31
15
58
96
776
2.05
2.84
4.0
4.3
14.48
12.47
mm/h
0.49
89
707
55
381
1.80
2.57
2.5
2.9
—
—
—
0
0
112
981
2.46
2.38
17.1
14.1
80.69
79.63
ml/min/173m2
0.23
98
780
24
132
2.01
2.23
3.7
4.4
27.52
10.90
ug/l
0.29
19
104
8
26
3.22
2.05
1.3
1.2
—
—
—
0
0
18
95
2.05
1.87
3.8
4.0
—
—
—
0
0
114
1034
2.27
1.73
17.1
14.9
17.64
22.07
mg/l
1.08
93
821
43
309
1.60
1.62
2.5
2.9
0.20
0.47
e6/l
1.12
28
232
13
68
2.02
1.39
1.8
1.6
—
—
—
0
0
44
329
1.52
1.37
4.1
3.7
2.69
9.38
mg/mmol
2.40
26
204
8
36
2.30
1.27
3.1
1.5
—
—
—
0
0
63
515
1.45
1.24
3.5
4.8
0.00
0.00
estimate
0.00
13
109
0
33
0.00
1.18
0.0
1.9
—
—
—
0
0
0
33
0.00
1.18
0.0
2.4
—
—
—
0
0
72
608
1.44
1.17
12.0
9.8
4.41
4.07
e9/l
0.55
64
526
29
207
1.52
1.10
1.9
1.7
470.65
473.95
pmol/l
0.03
23
175
61
509
1.39
1.01
2.9
3.6
0.00
0.00
estimate
0.00
13
108
61
509
1.39
1.01
7.3
6.5
1.22
1.21
mmol/l
0.21
50
431
0
29
0.00
0.99
0.0
1.4
—
11.16
—
0
9
23
160
1.54
0.98
1.6
1.8
29.74
29.00
s
0.28
23
155
62
522
1.38
0.96
2.8
3.6
0.00
0.00
estimate
0.00
12
101
6
33
1.86
0.80
1.0
1.2
—
—
—
0
0
50
417
1.33
0.79
3.7
2.1
74.27
78.03
nmol/l
0.43
45
363
25
187
1.42
0.76
1.8
1.6
1358.78
1274.78
nmol/l
0.15
18
135
108
1014
1.50
0.76
5.1
4.7
6.19
5.94
mmol/l
1.11
98
930
40
325
1.34
0.75
4.1
3.1
839.54
1152.52
ng/l
0.49
28
279
5
25
2.04
0.73
2.0
1.3
—
—
—
0
0
31
247
1.34
0.65
2.2
2.4
—
—
—
0
0
107
1011
1.43
0.63
4.4
4.7
1.43
1.50
mmol/l
0.86
97
927
36
295
1.31
0.63
3.4
3.7
0.00
0.00
estimate
0.00
13
104
21
159
1.39
0.60
1.5
1.5
—
—
—
0
0
6
35
1.75
0.58
1.2
1.2
—
—
—
0
0
6
36
1.70
0.57
4.3
1.1
0.00
0.00
g/l
—
6
36
47
404
1.26
0.57
3.3
3.7
—
—
—
0
0
9
60
1.54
0.56
1.6
1.3
—
—
—
0
0
13
91
1.48
0.55
3.9
5.9
7.15
9.09
mmol/l
0.65
13
86
107
1021
1.35
0.49
4.5
4.7
4.52
4.71
mmol/l
1.12
98
945
7
48
1.49
0.47
4.0
1.1
—
—
—
0
0
21
167
1.31
0.45
2.9
2.5
0.77
2.91
e6/l
1.45
11
88
101
960
1.28
0.44
5.3
4.7
1.97
1.98
mu/l
0.03
93
873
48
424
1.22
0.44
2.3
1.8
88.61
95.49
pmol/l
0.58
27
202
0
15
0.00
0.41
0.0
1.3
—
6.00
—
0
7
0
15
0.00
0.41
0.0
2.3
—
—
—
0
0
0
15
0.00
0.41
0.0
1.4
—
—
—
0
0
0
16
0.00
0.41
0.0
1.6
—
—
—
0
0
0
16
0.00
0.41
0.0
1.6
—
—
—
0
0
0
16
0.00
0.41
0.0
1.6
—
—
—
0
0
0
16
0.00
0.41
0.0
1.6
—
—
—
0
0
0
16
0.00
0.41
0.0
1.6
—
—
—
0
0
0
17
0.00
0.41
0.0
1.5
—
—
—
0
0
5
34
1.49
0.41
4.4
1.1
0.00
0.00
g/l
—
5
34
5
34
1.49
0.41
4.4
1.1
0.00
0.00
g/l
—
5
34
5
35
1.45
0.40
1.4
1.2
—
—
—
0
0
5
35
1.45
0.40
1.4
1.2
—
—
—
0
0
24
285
0.80
0.38
4.3
4.7
26.32
20.75
%
0.70
15
149
14
178
0.76
0.37
1.4
1.3
1.20
11.93
u/ml
—
5
67
108
1043
1.27
0.34
5.1
5.3
2.58
2.78
mmol/l
1.44
99
950
22
184
1.24
0.33
2.8
2.4
0.43
1.30
e6/l
2.37
12
104
20
166
1.24
0.32
1.4
1.4
—
—
—
0
0
102
982
1.22
0.31
6.7
5.9
41.28
40.09
mmol/mol
0.55
94
918
7
56
1.26
0.30
1.9
1.3
—
—
—
0
0
16
131
1.25
0.29
5.9
7.3
—
—
—
0
0
95
912
1.18
0.28
18.9
14.8
40.63
39.92
%
0.56
60
654
53
491
1.14
0.25
3.5
4.2
—
—
—
0
0
10
124
0.79
0.23
1.3
1.7
—
—
—
0
0
101
980
1.17
0.22
4.1
4.2
1.40
1.29
mmol/l
0.89
92
897
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
0
10
0.00
0.21
0.0
2.8
—
13.77
—
0
10
0
12
0.00
0.21
0.0
2.0
—
—
—
0
0
0
12
0.00
0.21
0.0
1.6
—
4.20
—
0
5
0
12
0.00
0.21
0.0
1.2
—
—
—
0
0
0
12
0.00
0.21
0.0
1.4
—
—
—
0
0
0
13
0.00
0.21
0.0
1.8
—
—
—
0
0
0
13
0.00
0.21
0.0
1.1
—
—
—
0
0
27
242
1.15
0.20
1.4
1.7
1.74
1.47
mg/l
0.15
20
190
0
14
0.00
0.20
0.0
1.2
—
—
—
0
0
0
14
0.00
0.20
0.0
1.2
—
—
—
0
0
0
14
0.00
0.20
0.0
1.4
—
—
—
0
0
0
14
0.00
0.20
0.0
1.2
—
—
—
0
0
0
14
0.00
0.20
0.0
1.1
—
—
—
0
0
0
14
0.00
0.20
0.0
1.4
—
—
—
0
0
0
14
0.00
0.20
0.0
1.2
—
—
—
0
0
0
14
0.00
0.20
0.0
1.9
—
—
—
0
0
0
14
0.00
0.20
0.0
1.6
—
—
—
0
0
0
14
0.00
0.20
0.0
1.2
—
—
—
0
0
0
14
0.00
0.20
0.0
1.4
—
—
—
0
0
26
234
1.14
0.18
1.3
1.2
0.49
1.12
u/ml
—
7
56
72
691
1.10
0.16
3.4
3.2
60.58
49.52
u/l
0.37
67
646
10
119
0.83
0.16
1.3
1.7
—
—
—
0
0
61
586
1.08
0.12
2.5
2.9
—
—
—
0
0
15
165
0.90
0.09
1.5
1.8
—
—
—
0
0
7
67
1.05
0.08
1.1
2.4
—
—
—
0
0
6
74
0.80
0.08
1.5
2.6
—
—
—
0
0
44
424
1.06
0.07
4.4
4.1
21.18
37.80
ng/l
1.29
34
299
31
298
1.05
0.05
1.5
1.7
1.43
1.35
mmol/l
0.20
26
248
12
128
0.93
0.03
5.6
6.7
5.28
5.07
kpa
0.48
12
123
12
128
0.93
0.03
5.6
6.6
16.57
12.17
kpa
0.58
12
123
79
791
1.00
0.00
4.9
3.9
15.03
14.77
pmol/l
0.35
73
712
5
54
0.92
0.00
2.6
3.3
24.20
24.74
mmol/l
—
5
54
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
2.8
—
—
—
0
0
0
6
0.00
0.00
0.0
2.8
—
—
—
0
0
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
0.33
—
0
5
0
8
0.00
0.00
0.0
1.5
—
6.20
—
0
8
0
8
0.00
0.00
0.0
2.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
0.00
0.0
3.0
—
—
—
0
0
0
5
0.00
0.00
0.0
3.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0
0
6
0.00
0.00
0.0
2.8
—
—
—
0
0
(3016894) Varicella zoster virus DNA [Presence] in Cerebral spinal fluid by NAA with probe detection
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
0.00
0.0
2.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
3.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded from FinRegistry analyses (omitted endpoint).
Relationships between endpoints
↥Index endpoint: C3_RECTUM_NEUROENDOCRINE – Neuroendocrine tumor and carcinoma of rectum
GWS hits: -
This endpoint is excluded from FinRegistry analyses (omitted endpoint).