No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
519972 |
1. Apply sex-specific ruleNone |
519972 |
2. Check conditionsNone |
519972 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
3 out of 7 registries used, show all original rules. |
120 |
4. Check minimum number of eventsNone |
120 |
5. Include endpointsNone |
120 |
6. Filter based on genotype QC (FinnGen only) |
111 |
Control definitions (FinnGen only)
- Control exclude
- AB1_HELMINTIASES
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF13
Schistosomiasis [bilharziasis]
based on the number of shared cases.
Similar with more cases:
Similar with less cases:
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 111 | 63 | 48 |
| Unadjusted period prevalence (%) | 0.02 | 0.02 | 0.02 |
| Median age at first event (years) | 53.37 | 48.76 | 59.42 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
No data
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 120
- Matched controls
- 1200
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
B65.3
ICD-10 Finland
Cercarial dermatitis
+∞
105.2
85
*
B65.9
ICD-10 Finland
Schistosomiasis, unspecified
+∞
7.4
7
*
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
11
18
6.61
4.72
1.3
1.7
359.00
188.10
u/ml
—
6
10
11
19
6.26
4.56
1.4
1.8
—
—
—
0
0
49
303
2.04
3.45
2.9
3.2
—
—
—
0
0
10
23
4.64
3.39
1.8
4.6
199.60
189.26
%
—
10
23
11
31
3.80
3.08
4.5
1.4
—
—
—
0
0
10
26
4.10
3.06
1.5
3.8
79.50
91.54
%
—
10
26
41
247
2.00
3.04
2.7
3.6
0.00
0.00
estimate
-0.00
17
92
5
5
10.35
3.00
1.6
2.0
—
—
—
0
0
56
404
1.72
2.22
5.8
7.2
1.21
1.22
mmol/l
0.44
46
348
38
249
1.77
2.09
3.2
2.9
0.17
0.38
e6/l
0.97
31
185
8
28
2.99
1.90
1.8
1.4
—
—
—
0
0
34
222
1.74
1.88
1.6
1.5
—
—
—
0
0
60
456
1.63
1.87
3.1
3.5
0.00
0.00
estimate
-0.00
17
90
59
447
1.63
1.86
4.1
4.8
0.00
0.00
estimate
-0.00
17
94
17
89
2.06
1.81
2.5
2.1
368.47
380.00
nmol/l
0.10
17
80
59
453
1.59
1.73
3.1
3.4
0.00
0.01
estimate
0.50
17
100
10
41
2.57
1.69
1.5
1.3
—
—
—
0
0
31
205
1.69
1.62
2.5
2.1
—
—
—
0
0
17
94
1.94
1.57
7.9
6.2
105.47
104.05
mmol/l
0.84
17
94
86
734
1.61
1.51
3.9
3.7
12.31
10.30
mm/h
0.58
81
678
88
757
1.61
1.48
3.9
3.8
14.16
14.67
pmol/l
1.46
81
689
23
145
1.73
1.42
3.7
2.9
3.22
2.69
e6/l
0.15
13
81
7
29
2.50
1.41
2.0
1.5
—
—
—
0
0
50
383
1.52
1.41
13.4
10.5
1.10
1.23
inr
0.74
21
111
108
986
1.95
1.39
16.5
12.5
27.83
21.43
mg/l
1.03
98
756
101
905
1.73
1.38
4.9
4.5
1.82
1.86
mu/l
0.16
94
831
5
17
3.02
1.37
1.0
1.4
—
—
—
0
0
5
17
3.02
1.37
1.0
1.4
—
—
—
0
0
23
148
1.69
1.32
3.1
2.7
0.88
0.86
e6/l
0.02
13
83
33
237
1.54
1.23
1.3
1.3
3.23
1.10
u/ml
—
7
71
12
64
1.97
1.23
4.7
2.2
62.00
78.56
ml/min/173m2
—
5
32
0
34
0.00
1.18
0.0
3.1
—
56.99
—
0
34
35
258
1.50
1.15
2.0
1.8
1.36
1.41
mmol/l
0.14
29
219
107
986
1.79
1.15
16.5
13.4
139.57
139.72
mmol/l
0.38
107
957
15
89
1.78
1.14
1.3
1.6
—
—
—
0
0
14
82
1.80
1.11
2.1
2.4
29.44
27.49
u/l
—
9
68
96
868
1.53
1.05
5.7
5.1
38.68
39.21
mmol/mol
0.24
89
821
25
175
1.54
1.04
1.1
1.3
18.10
28.92
iu/ml
—
6
61
45
357
1.42
1.01
2.9
3.4
—
—
—
0
0
6
27
2.28
0.95
2.5
1.9
—
—
—
0
0
15
95
1.66
0.92
1.3
1.6
—
—
—
0
0
102
944
1.54
0.89
4.7
4.2
5.79
5.84
mmol/l
0.14
95
875
23
165
1.49
0.86
1.0
1.3
1.16
8.07
u/ml
—
10
71
8
46
1.79
0.84
1.3
1.6
—
—
—
0
0
66
573
1.34
0.81
11.8
9.7
3.63
4.04
e9/l
0.88
58
505
23
168
1.46
0.79
1.9
2.3
—
—
—
0
0
5
24
2.13
0.75
1.6
1.4
—
—
—
0
0
9
57
1.63
0.73
1.2
1.6
—
—
—
0
0
100
932
1.44
0.73
14.2
11.4
91.31
86.94
ml/min/173m2
1.50
85
740
5
27
1.89
0.69
1.8
2.3
—
—
—
0
0
5
28
1.82
0.67
1.2
2.0
0.00
0.00
g/l
—
5
28
52
446
1.29
0.66
3.3
2.5
—
—
—
0
0
19
139
1.44
0.65
1.2
1.9
—
—
—
0
0
88
942
0.75
0.63
3.9
3.7
1.30
1.28
mmol/l
0.07
81
873
15
107
1.46
0.59
6.7
6.5
—
—
—
0
0
6
35
1.75
0.58
1.5
1.5
—
—
—
0
0
79
724
1.27
0.55
3.3
3.3
—
—
—
0
0
44
379
1.25
0.52
2.0
2.4
73.15
74.40
nmol/l
0.11
39
339
27
219
1.30
0.51
2.6
1.9
2.90
3.15
mg/l
0.23
22
190
40
342
1.25
0.50
2.0
1.8
88.90
93.59
pmol/l
0.33
24
175
115
1119
1.66
0.47
24.0
18.2
247.28
252.28
e9/l
0.31
115
1095
7
51
1.40
0.45
10.0
7.3
23.69
24.71
mmol/l
—
7
51
8
57
1.43
0.43
1.5
1.3
—
—
—
0
0
12
88
1.40
0.42
2.4
3.4
—
—
—
0
0
5
33
1.54
0.42
1.2
1.1
—
—
—
0
0
5
33
1.54
0.42
1.2
1.1
—
—
—
0
0
0
15
0.00
0.41
0.0
1.5
—
—
—
0
0
0
16
0.00
0.41
0.0
1.6
—
—
—
0
0
0
17
0.00
0.41
0.0
1.5
—
—
—
0
0
115
1121
1.62
0.37
24.0
18.2
135.52
135.98
g/l
0.13
115
1106
115
1121
1.62
0.37
23.9
18.2
4.55
4.52
e12/l
0.24
115
1095
19
155
1.27
0.35
1.8
2.1
—
—
—
0
0
17
137
1.28
0.34
1.9
2.2
18.54
13.71
umol/l
0.32
17
125
6
45
1.35
0.34
1.2
1.7
—
—
—
0
0
23
196
1.21
0.30
1.9
1.9
1.09
1.07
mg/l
0.02
14
155
14
112
1.28
0.30
2.1
2.3
21.57
22.51
%
0.07
14
96
5
38
1.33
0.23
1.2
1.8
—
—
—
0
0
5
39
1.29
0.23
2.2
6.4
24.40
24.51
mmol/l
—
5
39
108
1055
1.24
0.22
12.3
9.6
27.81
25.53
u/l
0.71
108
1020
0
11
0.00
0.21
0.0
1.7
—
13.36
—
0
11
0
12
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
4.3
—
90.97
—
0
12
0
12
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
1.7
—
—
—
0
0
0
12
0.00
0.21
0.0
1.3
—
—
—
0
0
0
14
0.00
0.20
0.0
1.6
—
—
—
0
0
0
14
0.00
0.20
0.0
1.9
—
0.12
—
0
8
0
14
0.00
0.20
0.0
1.2
—
—
—
0
0
35
322
1.12
0.18
3.3
3.4
16.74
31.59
ng/l
1.05
20
199
6
78
0.76
0.16
1.5
1.5
—
—
—
0
0
14
125
1.14
0.10
2.1
2.2
2.41
2.43
g/l
0.04
14
114
20
184
1.10
0.10
3.0
2.9
0.79
0.78
ug/l
0.01
14
117
18
165
1.11
0.09
3.2
2.8
467.92
65.54
ng/l
0.78
12
108
23
214
1.09
0.09
2.7
3.1
400.81
1042.11
ng/l
1.96
18
175
20
185
1.10
0.09
1.1
1.5
—
—
—
0
0
5
61
0.81
0.08
1.0
1.0
—
—
—
0
0
7
82
0.84
0.07
1.6
1.7
—
—
—
0
0
25
238
1.06
0.05
4.0
4.7
19.38
22.23
%
0.74
15
110
96
971
0.94
0.04
4.1
4.1
1.49
1.47
mmol/l
0.19
89
908
11
102
1.09
0.03
1.5
1.9
—
—
—
0
0
98
973
1.04
0.01
4.3
4.1
4.75
4.66
mmol/l
0.40
91
914
25
244
1.03
0.00
4.9
3.8
1.28
8.66
mg/mmol
2.16
13
154
99
985
1.03
0.00
4.7
4.5
2.85
2.77
mmol/l
0.37
92
921
0
9
0.00
0.00
0.0
1.4
—
—
—
0
0
0
9
0.00
0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
5.7
—
217.67
—
0
6
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
6
64
0.93
-0.00
4.0
3.1
4.69
4.64
pmol/l
—
6
56
0
7
0.00
-0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
2.0
—
54.80
—
0
5
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
79.80
—
0
5
0
5
0.00
-0.00
0.0
1.2
—
21.60
—
0
5
0
5
0.00
-0.00
0.0
1.2
—
43.40
—
0
5
0
7
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.6
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: AB1_SCHISTOSOMIASIS_WIDE – Schistosomiasis [bilharziasis]
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).