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This is a non-core endpoint: only basic statistics are computed.

See these related core endpoints for full statistics:

Toxic effect of other noxious substances eaten as food

ST19_TOXIC_EFFECT_OTHER_NOXIO_SUBST_EATEN_FOOD

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 T62
  • Cause of death: ICD-10 T62

2 out of 7 registries used, show all original rules.

146

4. Check minimum number of events

None

146

5. Include endpoints

None

146

6. Filter based on genotype QC (FinnGen only)

134

Control definitions (FinnGen only)

Control exclude
ST19_TOXIC_EFFEC_SUBST_CHIEF_NONME_SOURCE

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
T5[1-9]|T6[0-5]
Name in latin
Effectus toxicus aliarum substantiarum nocivarum cibo sumptarum

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 134 70 64
Unadjusted period prevalence (%) 0.03 0.02 0.03
Median age at first event (years) 46.52 42.33 51.11

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
146
Matched controls
1460
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
T62.0
ICD-10 Finland
Toxic effect: Ingested mushrooms
4678.7
141.3
113
*
X49
ICD-10 Finland
Accidental poisoning by and exposure to other and unspecified chemicals and noxious substances
89.6
26.9
29
*
T62.2
ICD-10 Finland
Toxic effect: Other ingested (parts of) plant(s)
+∞
18.1
17
*
X28
ICD-10 Finland
Contact with other specified venomous plants
70.8
11.8
13
*
T62.9
ICD-10 Finland
Toxic effect: Noxious substance eaten as food, unspecified
+∞
10.5
10
*
X69
ICD-10 Finland
Intentional self-poisoning by and exposure to other and unspecified chemicals and noxious substances
11.2
9.8
18
18
ZY010
NOMESCO Finland
Hospital outpatient
4.7
7.0
17
40
X48
ICD-10 Finland
Accidental poisoning by and exposure to pesticides
+∞
6.3
6
*
X58
ICD-10 Finland
Exposure to other specified factors
3.0
6.1
31
121
N06BA04
ATC
methylphenidate; oral
4.4
6.1
16
40

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
26
84
3.55
7.00
2.6
4.0
1.04
2.15
mmol/l
1.03
20
60
71
434
2.24
5.37
5.6
5.5
1.20
1.22
mmol/l
1.34
64
391
19
63
3.32
4.88
3.9
2.0
—
—
—
0
0
73
469
2.11
4.70
5.5
6.8
1.20
1.22
mmol/l
1.03
63
399
48
264
2.22
4.57
2.4
2.0
304.83
183.39
u/l
0.54
48
252
21
78
2.98
4.48
6.1
7.3
—
—
—
0
0
66
425
2.01
4.07
14.1
11.8
1.22
1.21
inr
0.03
22
133
10
19
5.57
3.90
3.0
3.2
2.28
2.72
mmol/l
—
5
11
7
9
8.10
3.60
13.0
24.1
1146.71
1512.67
nmol/l
—
7
9
7
9
8.10
3.60
10.4
15.6
767.29
892.56
nmol/l
—
7
9
13
37
3.75
3.50
3.8
1.8
—
—
—
0
0
8
15
5.57
3.24
2.9
3.5
—
—
—
0
0
47
288
1.93
3.22
3.3
4.1
7.40
7.40
ph
0.04
12
52
18
74
2.63
3.19
3.8
1.5
—
—
—
0
0
12
35
3.64
3.19
2.3
3.5
23.82
23.96
mmol/l
0.06
12
35
107
853
1.95
3.18
3.6
3.8
14.66
14.81
pmol/l
0.26
100
762
47
292
1.90
3.07
3.5
2.9
7.56
8.29
mmol/l
0.40
42
248
42
257
1.89
2.85
5.2
4.3
—
—
—
0
0
34
195
1.97
2.78
2.6
2.8
484.39
554.99
mosm/kgh2o
1.06
28
165
20
93
2.33
2.76
3.6
1.7
—
—
—
0
0
20
93
2.33
2.76
3.5
1.7
—
—
—
0
0
32
182
1.97
2.68
1.8
1.7
421.32
474.87
pmol/l
0.51
25
157
73
536
1.72
2.66
7.2
6.0
—
—
—
0
0
20
95
2.28
2.63
3.6
1.7
—
—
—
0
0
39
239
1.86
2.62
1.4
1.4
17.30
21.77
nmol/l
1.26
31
208
19
89
2.30
2.58
3.6
1.7
—
—
—
0
0
20
96
2.26
2.57
3.5
1.7
—
—
—
0
0
6
11
5.63
2.57
1.0
2.2
—
—
—
0
0
52
351
1.75
2.53
3.8
3.5
18.39
27.42
ng/l
1.22
33
230
9
26
3.62
2.53
3.0
6.0
1.03
1.48
mmol/l
—
9
26
60
423
1.71
2.50
3.4
3.1
6.10
5.75
ph
—
5
36
5
155
0.30
2.46
1.2
1.3
—
—
—
0
0
36
220
1.84
2.43
2.5
2.6
4.86
5.21
e6/l
0.06
30
197
120
1034
1.90
2.31
4.9
4.4
1.70
1.86
mu/l
1.23
115
937
8
23
3.62
2.30
3.3
3.7
3.66
3.90
mmol/l
—
8
23
9
30
3.13
2.19
3.7
4.3
—
—
—
0
0
45
305
1.69
2.12
1.8
2.0
—
—
—
0
0
92
750
1.61
2.03
4.8
3.8
—
—
—
0
0
20
106
2.03
2.03
6.9
6.3
103.55
104.49
mmol/l
0.32
20
106
29
175
1.82
2.02
1.3
1.5
—
—
—
0
0
53
379
1.63
2.02
1.9
1.8
100.05
93.94
pmol/l
0.38
30
192
76
594
1.58
1.99
8.0
5.6
0.20
0.18
e9/l
0.46
67
525
24
137
1.90
1.98
2.4
2.0
—
—
—
0
0
9
33
2.84
1.97
2.2
2.3
1.69
1.75
g/l
—
9
28
19
100
2.03
1.96
7.6
7.1
0.87
1.68
mmol/l
0.69
14
81
71
548
1.58
1.95
6.8
5.2
2.72
2.68
%
0.07
65
514
36
235
1.71
1.93
1.4
1.7
—
—
—
0
0
52
374
1.61
1.92
3.8
3.4
17.97
35.36
e6/l
0.59
39
262
35
227
1.71
1.92
3.3
3.4
—
—
—
0
0
8
28
2.96
1.89
1.0
1.3
—
—
—
0
0
71
552
1.56
1.87
7.1
5.4
8.58
8.36
%
0.20
65
519
46
323
1.62
1.87
3.4
2.9
24.04
50.11
e6/l
0.58
38
249
72
562
1.55
1.86
6.8
5.0
56.69
56.78
%
0.03
66
527
27
164
1.79
1.84
1.7
1.5
1113.45
1218.39
nmol/l
0.35
20
122
73
573
1.55
1.83
6.8
5.2
29.18
28.74
%
0.16
67
540
43
300
1.61
1.78
8.0
6.1
—
—
—
0
0
73
578
1.53
1.73
6.8
5.2
0.58
0.57
e9/l
0.23
65
503
73
578
1.53
1.73
7.0
5.3
0.04
0.04
e9/l
0.96
65
501
12
55
2.29
1.72
4.1
4.2
—
—
—
0
0
68
531
1.53
1.72
6.8
5.3
0.67
0.64
%
0.12
61
494
10
41
2.54
1.68
3.1
3.2
—
—
—
0
0
128
1158
1.85
1.67
17.3
12.1
20.32
22.12
mg/l
0.29
97
878
40
279
1.60
1.65
3.4
2.8
—
—
—
0
0
67
527
1.50
1.61
5.9
4.5
0.00
0.00
estimate
-0.00
13
107
68
537
1.50
1.60
4.3
3.4
0.00
0.00
estimate
-0.00
11
102
6
20
3.08
1.60
6.3
4.0
36.50
35.13
umol/l
—
6
15
24
148
1.74
1.56
2.3
2.1
11.36
13.48
umol/l
0.94
24
138
66
520
1.49
1.56
10.5
8.0
0.00
0.00
e9/l
0.46
57
411
40
283
1.57
1.55
3.4
2.8
0.17
0.34
e6/l
0.64
33
209
7
27
2.67
1.53
1.0
1.2
—
—
—
0
0
67
532
1.48
1.51
4.3
3.3
0.00
0.00
estimate
-0.00
15
109
10
45
2.31
1.50
9.7
7.7
—
—
—
0
0
9
38
2.46
1.48
1.4
1.2
—
—
—
0
0
41
295
1.54
1.47
4.3
3.7
0.00
0.00
estimate
-0.00
11
104
7
28
2.57
1.47
1.0
1.2
—
58.00
—
0
5
15
81
1.95
1.46
1.6
1.9
13.78
14.39
nmol/l
0.13
15
76
6
22
2.80
1.45
1.7
2.0
23.45
22.96
mmol/l
—
6
22
16
90
1.87
1.39
2.6
4.6
1.00
0.88
%
—
8
33
73
597
1.45
1.38
7.2
5.2
1.84
1.87
e9/l
0.14
65
537
10
47
2.21
1.37
10.5
8.9
94.90
94.79
%
—
10
47
15
85
1.85
1.28
2.7
4.7
0.14
0.21
%
—
7
28
47
358
1.46
1.28
2.6
3.0
2.34
2.37
mmol/l
0.75
42
310
8
36
2.29
1.26
2.0
2.7
0.70
0.67
%
—
8
36
8
36
2.29
1.26
1.9
1.5
—
—
—
0
0
17
102
1.75
1.22
1.2
1.6
—
—
—
0
0
14
79
1.85
1.22
2.7
4.6
0.57
0.65
%
—
7
26
10
50
2.07
1.19
10.5
7.9
1.06
1.29
%
—
10
50
117
1063
1.51
1.16
4.9
3.8
5.73
5.78
mmol/l
0.21
108
977
19
120
1.67
1.15
1.3
1.4
—
—
—
0
0
37
274
1.47
1.15
3.6
3.3
—
—
—
0
0
22
145
1.61
1.14
2.3
2.0
2.36
2.34
g/l
0.05
22
129
80
687
1.36
1.05
11.5
8.7
4.03
4.02
e9/l
0.01
71
592
5
22
2.32
1.04
2.4
1.7
—
—
—
0
0
5
22
2.32
1.04
1.0
1.3
—
—
—
0
0
12
68
1.83
1.04
4.4
2.2
—
—
—
0
0
9
50
1.85
0.98
11.6
8.4
0.69
0.69
%
—
9
50
7
36
1.99
0.98
2.4
2.5
—
—
—
0
0
26
186
1.48
0.96
3.4
3.3
12.82
200.03
ng/l
1.85
19
132
92
816
1.34
0.93
4.8
3.6
11.87
10.26
mm/h
0.45
84
745
15
95
1.65
0.91
4.6
3.7
—
—
—
0
0
83
728
1.32
0.89
4.5
3.4
—
—
—
0
0
6
31
1.97
0.85
8.2
8.0
—
—
—
0
0
11
65
1.75
0.85
1.1
1.3
—
—
—
0
0
20
139
1.51
0.85
1.2
1.3
2184.00
598.75
titre
—
5
32
17
114
1.56
0.84
1.1
1.3
—
—
—
0
0
111
1022
1.36
0.81
21.4
14.2
14.55
14.32
%
0.18
111
1008
12
74
1.68
0.81
2.8
3.3
—
—
—
0
0
112
1036
1.35
0.77
21.1
14.8
332.07
333.47
g/l
0.55
112
1031
30
231
1.38
0.76
3.5
3.2
1870.28
77.57
mg/l
0.46
18
152
5
24
2.12
0.75
1.2
1.0
1.60
3.44
e6/l
—
5
18
5
24
2.12
0.75
3.0
4.7
57.80
57.58
%
—
5
24
5
24
2.12
0.75
1.2
1.2
51.60
378.11
e6/l
—
5
19
7
38
1.88
0.74
1.1
1.1
—
—
—
0
0
10
60
1.72
0.74
1.5
1.3
—
—
—
0
0
14
93
1.56
0.72
1.1
1.3
27.46
165.34
iu/ml
—
5
36
21
153
1.44
0.72
3.6
2.5
7.24
2.40
e6/l
0.69
14
85
31
246
1.33
0.65
3.8
3.9
1.54
11.79
mg/mmol
1.60
16
159
129
1230
1.42
0.63
15.5
10.8
—
—
—
0
0
23
175
1.37
0.63
2.3
2.2
43.83
126.61
ug/g
1.46
18
135
17
123
1.43
0.61
1.2
1.2
—
—
—
0
0
0
20
0.00
0.61
0.0
2.4
—
—
—
0
0
16
115
1.44
0.59
1.4
1.9
—
—
—
0
0
12
82
1.50
0.56
3.1
4.7
0.00
0.40
%
—
5
25
118
1117
1.29
0.55
4.9
4.1
2.89
2.77
mmol/l
0.61
109
1027
116
1096
1.28
0.55
4.4
3.7
4.79
4.65
mmol/l
0.66
108
1013
10
66
1.55
0.54
1.4
2.7
—
—
—
0
0
103
965
1.23
0.50
6.0
4.8
38.89
38.82
mmol/mol
0.03
98
907
5
33
1.53
0.41
1.6
3.0
—
—
—
0
0
0
15
0.00
0.41
0.0
1.1
—
—
—
0
0
0
15
0.00
0.41
0.0
1.2
—
—
—
0
0
7
104
0.66
0.41
1.6
1.1
—
—
—
0
0
114
1088
1.22
0.40
4.4
3.7
1.40
1.45
mmol/l
0.66
106
1000
9
66
1.39
0.39
3.7
3.0
4.34
4.58
pmol/l
—
9
57
10
72
1.42
0.38
2.4
2.8
68.03
66.47
g/l
—
10
65
14
176
0.77
0.34
1.3
1.2
20.54
28.85
iu/ml
—
7
62
6
45
1.35
0.34
1.0
1.3
—
—
—
0
0
35
395
0.85
0.32
2.4
2.3
—
—
—
0
0
7
98
0.70
0.32
1.3
1.3
—
—
—
0
0
36
318
1.18
0.31
4.8
2.9
—
—
—
0
0
135
1319
1.31
0.31
25.4
17.0
39.28
40.69
%
1.77
126
1248
109
1048
1.16
0.28
4.0
3.3
1.44
1.27
mmol/l
1.19
100
960
9
120
0.73
0.28
1.1
1.4
—
—
—
0
0
13
160
0.79
0.27
2.3
1.6
—
—
—
0
0
5
39
1.29
0.23
3.0
2.2
—
—
—
0
0
19
164
1.18
0.21
1.3
1.2
32.33
6.47
u/ml
—
7
60
0
11
0.00
0.21
0.0
1.2
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
1.3
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
4.26
—
0
5
36
328
1.13
0.21
4.4
2.6
—
—
—
0
0
11
90
1.24
0.20
1.8
2.2
331.82
376.60
nmol/l
0.36
11
81
20
175
1.17
0.20
1.6
1.7
—
—
—
0
0
45
420
1.10
0.17
1.9
1.9
—
—
—
0
0
18
158
1.16
0.17
2.4
2.8
0.38
0.67
ug/l
—
10
101
30
323
0.91
0.13
2.0
2.1
—
—
—
0
0
5
43
1.17
0.10
1.6
1.3
—
—
—
0
0
6
57
1.05
0.08
1.0
1.1
—
—
—
0
0
5
61
0.81
0.08
1.2
1.2
—
—
—
0
0
13
118
1.11
0.07
1.9
2.6
1.48
1.72
%
0.69
13
105
14
128
1.10
0.07
1.2
1.1
—
—
—
0
0
31
324
0.95
0.06
1.5
1.5
—
—
—
0
0
10
93
1.08
0.02
3.0
4.1
—
—
—
0
0
30
304
0.98
0.00
1.6
1.3
0.50
0.92
u/ml
—
6
71
29
285
1.02
0.00
1.4
1.4
1.63
2.33
g/l
1.69
16
168
12
118
1.02
0.00
2.9
1.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
145.20
—
0
5
0
5
0.00
0.00
0.0
12.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
73.40
—
0
5
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
2286.60
—
0
5
0
7
0.00
0.00
0.0
1.4
—
—
—
0
0
0
8
0.00
0.00
0.0
1.6
—
—
—
0
0
0
8
0.00
0.00
0.0
1.8
—
12.65
—
0
8
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0
0
7
0.00
0.00
0.0
1.4
—
0.12
—
0
7
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.1
—
135.52
—
0
7
0
6
0.00
-0.00
0.0
1.8
—
1924.17
—
0
6
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.6
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
3.0
—
12.45
—
0
6
0
6
0.00
-0.00
0.0
1.5
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: ST19_TOXIC_EFFECT_OTHER_NOXIO_SUBST_EATEN_FOOD – Toxic effect of other noxious substances eaten as food

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).