Benign neoplasm: Uterine tubes and ligaments

CD2_BENIGN_UTERINE_TUBES_LIGAMENTS

No definition available.

Endpoint definition

↥

Endpoint definition steps	FinnGen
Phenotype data	520210
1. Apply sex-specific rule only females	293373
2. Check conditions None	293373
3. Check pre-conditions, main-only, mode, registry filters Registry filters: Hospital discharge: ICD-10 — D28.7& Hospital discharge: ICD-9 — 2210 Hospital discharge: ICD-8 — 2210 Cause of death: ICD-10 — D28.7& Cause of death: ICD-9 — 2210 Cause of death: ICD-8 — 2210 2 out of 7 registries used, show all original rules.	222
4. Check minimum number of events None	222
5. Include endpoints None	222
6. Filter based on genotype QC (FinnGen only)	222

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy: 3
First used in FinnGen datafreeze: DF2
Parent code in ICD-10: D28
Name in latin: Neoplasma benignum alterius organi genitalis feminini specificati

NAME	CD2_BENIGN_UTERINE_TUBES_LIGAMENTS
CONTROL_EXCLUDE
CONTROL_PRECONDITIONS
CONTROL_CONDITIONS
SEX	2
INCLUDE
PRE_CONDITIONS
CONDITIONS
OUTPAT_ICD
OUTPAT_OPER
HD_MAINONLY
HD_ICD_10_ATC
HD_ICD_10	D287
HD_ICD_9	2210
HD_ICD_8	2210
HD_ICD_10_EXCL
HD_ICD_9_EXCL
HD_ICD_8_EXCL
COD_MAINONLY
COD_ICD_10	D287
COD_ICD_9	2210
COD_ICD_8	2210
COD_ICD_10_EXCL
COD_ICD_9_EXCL
COD_ICD_8_EXCL
OPER_NOM
OPER_HL
OPER_HP1
OPER_HP2
KELA_REIMB
KELA_REIMB_ICD
KELA_ATC_NEEDOTHER
KELA_ATC
KELA_VNRO_NEEDOTHER
KELA_VNRO
CANC_TOPO
CANC_TOPO_EXCL
CANC_MORPH
CANC_MORPH_EXCL
CANC_BEHAV

Similar endpoints

↥

List of similar endpoints to Benign neoplasm: Uterine tubes and ligaments based on the number of shared cases.

Similar with more cases:

Similar with less cases:

Benign neoplasm: Uterine tubes and ligaments

Case counts by codes

↥

FinnGen case counts by registry codes:

Upset plot

Full data table

Summary Statistics

↥

-FinRegistry-

Key figures

	All	Female	Male
Number of individuals
Whole population	1728	1728	-
Only index persons	1555	1555	-
Unadjusted period prevalence (%)
Whole population	0.05	0.05	-
Only index persons	0.06	0.06	-
Median age at first event (years)
Whole population	-	39.39	-
Only index persons	-	37.97	-

-FinnGen-

Key figures

	All	Female	Male
Number of individuals	222	222	-
Unadjusted period prevalence (%)	0.08	0.08	-
Median age at first event (years)	36.36	36.36	-

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

No data

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

↥

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log₁₀(p-value) ≥ 6.

Matched cohort

Matched cases
201: Matched controls
2010

Code

Vocabulary

Description

Odds Ratio

-log₁₀(p)

N matched cases

N matched controls

22101

ICD-8 Finland

Benign neoplasm of other female genital organs, Fallopian tube and broad ligament

+∞

118.9

102

2210A

ICD-9 Finland

Benign neoplasm of other female genital organs, Fallopian tube and uterine ligaments

+∞

60.5

D28.7

ICD-10 Finland

Benign neoplasm: Other specified female genital organs

+∞

38.8

8204

FHL

Salpingo-oophorectomy

13.1

10.1

121

Kela drug reimbursment

Severe hypofunction of sexual glands

8.8

7.0

8206

FHL

Removal of the parovarial cyst

+∞

6.3

LabWAS

↥

(ID) Name

N Cases

N Controls

-log₁₀(p)

cases

controls

cases

controls

unit

-log₁₀(p)

N cases

N controls

(4024509)

9.14

10.33

1.8

1.2

—

(3019225) pH of Specimen

183

2.30

4.71

2.6

3.7

—

(42868674) Cholesterol in HDL/Cholesterol.total [Molar ratio] in Serum or Plasma

238

1.94

3.41

5.8

4.6

33.4

33.3

0.00

145

(3013512) EKG study

603

1.60

2.79

3.8

—

(3022313) Gas panel - Capillary blood

2.48

2.52

3.5

3.4

—

(40768804) Tissue Pathology biopsy report

105

851

1.44

1.95

2.1

—

(3044889) 12 lead EKG panel

123

1426

0.69

1.94

3.9

—

(3018418) pH of Serum or Plasma

680

0.66

1.83

3.3

3.6

7.4

—

125

(3002109) Cholesterol in LDL/Cholesterol in HDL [Mass Ratio] in Serum or Plasma

137

0.35

1.82

1.2

1.6

—

(46235759) Influenza virus B RNA [Presence] in Nasopharynx by NAA with probe detection

2.07

1.63

1.9

—

(46236098) ABO and Rh group [Type] in Blood by Confirmatory method

442

1.46

1.62

2.0

2.3

—

(3044254) Respiratory syncytial virus RNA [Presence] in Specimen by NAA with probe detection

2.03

1.46

2.1

1.8

—

(3030467) Casts [#/volume] in Urine by Automated count

553

0.68

1.39

3.8

3.1

0.2

0.5

e6/l

1.65

409

(3010566) Parathyrin.intact [Moles/volume] in Serum or Plasma

0.00

1.35

0.0

2.1

—

(36304419) Bacteria [Presence] in Urine

536

0.69

1.31

3.9

3.0

—

(3001079) Blood group antibody screen [Presence] in Serum or Plasma

104

888

1.32

1.25

3.3

4.0

—

(3022217) INR in Platelet poor plasma by Coagulation assay

244

1.46

1.17

17.4

19.1

1.5

1.2

inr

—

(3006923) Alanine aminotransferase [Enzymatic activity/volume] in Serum or Plasma

212

2038

1.89

1.16

11.1

10.7

24.7

23.3

u/l

0.64

203

1954

(3013707) Erythrocyte sedimentation rate by Westergren method

163

1492

1.35

1.16

4.6

4.3

12.0

13.5

mm/h

1.03

149

1358

(3004383) Neutrophil cytoplasmic Ab.classic [Titer] in Serum by Immunofluorescence

2.30

1.11

1.3

1.4

—

(3015736) pH of Urine

792

1.30

1.11

3.5

4.0

—

(4146454)

2.41

1.09

1.4

2.8

—

(3043109) Cytology report of Tissue fine needle aspirate Cyto stain

1.91

1.09

1.1

1.3

—

(3004410) Hemoglobin A1c/Hemoglobin.total in Blood

193

1821

1.46

1.09

6.3

5.9

39.5

39.9

mmol/mol

0.30

178

1682

(3019800) Troponin T.cardiac [Mass/volume] in Serum or Plasma

748

1.29

1.06

3.9

3.8

27.0

27.4

ng/l

0.01

549

(3044640) Blood type and Crossmatch panel - Blood

596

1.31

1.05

2.0

2.3

—

(40768443) Skin Pathology biopsy report

100

1.65

1.00

1.3

—

(3019900) Cholesterol [Moles/volume] in Serum or Plasma

201

1918

1.51

0.99

5.1

4.6

4.8

mmol/l

0.14

186

1760

(3015916) Alpha-1-Fetoprotein [Units/volume] in Serum or Plasma

2.20

0.98

1.0

1.5

1218.2

164.2

u/ml

—

(3028626) Oxygen [Partial pressure] in Capillary blood

1.97

0.98

2.4

2.3

7.7

kpa

—

(3045424) Erythrocytes [Presence] in Urine

2.26

0.94

1.3

1.6

—

(3030306) Epithelial cells.non-squamous [#/volume] in Urine by Automated count

341

0.70

0.90

4.1

2.6

1.0

1.2

e6/l

0.23

189

(3002582) Erythrocytes [#/volume] in Urine

588

0.77

0.87

3.4

3.2

16.5

53.0

e6/l

1.87

446

(3001308) Cholesterol in LDL [Moles/volume] in Serum or Plasma

204

1961

1.50

0.86

5.6

5.3

2.8

mmol/l

0.27

186

1790

(3029287) Urinalysis microscopic panel [#/volume] - Urine by Automated count

703

0.80

0.75

3.5

3.1

—

(3029879) Epithelial cells.squamous [#/volume] in Urine by Automated count

307

0.72

0.74

3.6

2.9

6.9

4.9

e6/l

0.23

158

(3018095) Leukocytes [#/volume] in Urine

712

0.80

0.73

4.2

3.8

413.8

90.3

e6/l

0.40

491

(3014162) Mycobacterium tuberculosis DNA [Presence] in Specimen by NAA with probe detection

1.60

0.72

3.3

2.3

—

(3021337) Troponin I.cardiac [Mass/volume] in Serum or Plasma

392

0.76

0.71

3.5

4.1

119.5

96.7

ng/l

0.12

312

(3002256) Pathology report gross observation

250

1.33

0.71

1.2

—

(3021901) Oxygen saturation in Capillary blood

1.87

0.69

1.6

2.0

—

(3019550) Sodium [Moles/volume] in Serum or Plasma

206

1996

1.44

0.68

15.6

16.4

140.1

139.8

mmol/l

0.81

200

1937

(3020891) Body temperature

1.57

0.67

2.8

4.2

—

(3021347) Calcium.ionized [Moles/volume] in Serum or Plasma

106

959

1.20

0.66

4.0

5.0

1.2

mmol/l

0.48

869

(3037467) Urinalysis macro (dipstick) panel - Urine

147

1373

1.21

0.64

5.1

4.7

—

(3021960) Folate [Moles/volume] in Serum or Plasma

506

1.23

0.63

1.5

24.4

23.2

nmol/l

0.19

422

(3048773) Triglyceride [Moles/volume] in Serum or Plasma --fasting

189

1814

1.28

0.62

4.7

4.1

1.3

mmol/l

0.21

171

1642

(42870588) Differential panel, method unspecified - Blood

622

1.21

0.62

6.7

5.3

—

(3023103) Potassium [Moles/volume] in Serum or Plasma

206

2001

1.41

0.61

15.7

16.5

3.9

mmol/l

0.11

201

1937

(3042596) Human coronavirus RNA [Presence] in Specimen by NAA with probe detection

0.00

0.60

0.0

1.6

—

(3011391) Calcitriol [Moles/volume] in Serum or Plasma

0.00

0.60

0.0

1.3

—

(3032773) Endomysium IgG Ab [Titer] in Serum

0.00

0.60

0.0

1.1

—

(21494434) Karyotype in Bone marrow

0.00

0.60

0.0

1.1

—

(3016888) Borrelia burgdorferi IgG Ab [Units/volume] in Serum

115

1.42

0.58

1.2

1.3

—

47.8

—

(3013826) Glucose [Moles/volume] in Serum or Plasma

121

1118

1.18

0.57

4.2

4.4

6.6

mmol/l

0.12

111

1034

(3016771) Amylase [Enzymatic activity/volume] in Serum or Plasma

646

1.19

0.57

2.5

2.2

84.3

55.1

u/l

0.67

590

(3016251) Hemoglobin.gastrointestinal [Presence] in Stool

116

1.41

0.56

3.1

2.4

—

(3038288) Influenza virus B RNA [Presence] in Specimen by NAA with probe detection

226

0.73

0.55

2.5

1.8

—

(43534045) MCM6 gene c.-13910C>T and -13915T>G [Identifier] in Blood or Tissue by Molecular genetics method Nominal

108

1.42

0.54

1.1

1.0

—

(3008909) Norovirus RNA [Presence] in Stool by NAA with probe detection

1.47

0.54

1.1

1.2

—

(3026361) Erythrocytes [#/volume] in Blood

213

2087

1.51

0.53

22.1

21.1

4.4

e12/l

0.83

204

2024

(3000963) Hemoglobin [Mass/volume] in Blood

213

2087

1.51

0.53

22.3

21.3

131.9

131.3

g/l

0.32

208

2051

(3035941) MCH [Entitic mass]

213

2087

1.51

0.53

22.0

21.0

29.9

30.2

1.21

206

2051

(3024731) MCV [Entitic volume]

213

2086

1.52

0.53

22.0

21.1

90.7

91.3

1.08

206

2050

(3018006) Microscopic observation [Identifier] in Cervix by Cyto stain.thin prep

430

0.81

0.53

1.3

1.4

—

(3009542) Hematocrit [Volume Fraction] of Blood

161

1685

0.84

0.52

14.5

15.5

39.4

39.1

0.21

1155

(3035350) Ketones [Presence] in Urine by Test strip

109

1004

1.17

0.52

3.9

4.2

0.0

estimate

0.00

187

(3029187) Natriuretic peptide.B prohormone N-Terminal [Mass/volume] in Serum or Plasma

593

1.19

0.52

2.9

3.1

989.1

1149.5

ng/l

0.20

511

(3018251) Fasting glucose [Moles/volume] in Serum or Plasma

198

1920

1.29

0.52

5.4

4.8

5.8

5.9

mmol/l

0.99

182

1741

(3043924) Respiratory syncytial virus RNA [Identifier] in Specimen by NAA with probe detection

223

0.74

0.51

2.4

1.8

—

(3037522) Nuclear Ab [Titer] in Serum

272

1.25

0.51

1.4

1.3

146.7

642.8

titre

—

(3015399) Transferrin receptor.soluble [Mass/volume] in Serum or Plasma

479

1.20

0.51

2.7

2.2

3.0

3.3

mg/l

0.43

411

(3019150) Specific gravity of Urine by Refractometry

451

1.20

0.50

4.7

1.0

kg/l

0.47

(3045414) Leukocytes [Presence] in Urine

1.42

0.49

2.2

1.9

—

(3007853) Bacteria identified in Skin by Aerobe culture

200

1.28

0.49

1.8

1.5

—

(40761511) CBC panel - Blood by Automated count

193

1982

0.80

0.47

13.8

13.1

—

(3043747) Beta 2 globulin [Mass/volume] in Serum or Plasma by Electrophoresis

0.59

0.46

1.0

2.6

3.3

3.9

g/l

—

(3050238) Crystals [Presence] in Synovial fluid by Light microscopy

1.44

0.46

1.1

1.3

—

(3025839) Triglyceride [Moles/volume] in Serum or Plasma

589

0.85

0.45

1.7

1.6

1.2

1.3

mmol/l

0.48

489

(3021601) Nitrite [Presence] in Urine by Test strip

109

1013

1.15

0.45

4.9

5.6

0.0

estimate

0.00

183

(3023602) Cholesterol in HDL [Moles/volume] in Serum or Plasma

196

1905

1.25

0.44

5.3

4.5

1.6

mmol/l

1.58

180

1741

(3003510) Neisseria gonorrhoeae DNA [Presence] in Urine by NAA with probe detection

0.64

0.43

1.5

1.6

—

(3020460) C reactive protein [Mass/volume] in Serum or Plasma

196

1907

1.24

0.42

14.9

14.1

16.6

20.7

mg/l

1.55

155

1483

(40764126) Parainfluenza virus RNA [Presence] in Specimen by NAA with probe detection

0.00

0.41

0.0

1.7

—

(3012441) Differential panel - Pleural fluid

0.00

0.41

0.0

1.3

—

(3019601) Blood group antibody investigation [Interpretation] in Plasma or RBC

0.00

0.41

0.0

2.3

—

(3016750) Collection duration of Urine

0.00

0.41

0.0

2.4

—

461.5

—

(3004775) Volume in Urine collected for unspecified duration

0.00

0.41

0.0

2.9

—

597.1

—

(3009261) Glucose [Presence] in Urine by Test strip

109

1018

1.14

0.41

3.9

4.2

0.0

estimate

0.00

181

(3005895) Myoglobin [Mass/volume] in Serum or Plasma

1.35

0.40

1.4

1.7

87.1

187.1

ug/l

—

(3011288) Drugs identified in Urine by Screen method

0.00

0.40

0.0

1.2

—

(3003694) ABO and Rh group [Type] in Blood

479

0.85

0.39

1.3

—

(40762119) U1 small nuclear ribonucleoprotein 70kD Ab [Units/volume] in Serum

0.00

0.39

0.0

1.2

—

(42529200) Cancer Ag 15-3 [Units/volume] in Serum or Plasma by Immunoassay

1.40

0.38

3.0

2.7

28.5

61.2

u/ml

—

(3020059) Calcium [Moles/volume] corrected for albumin in Serum or Plasma

425

0.84

0.38

2.4

2.7

2.4

2.5

mmol/l

0.14

370

(3003327) Ova and parasites identified in Stool by Light microscopy

1.32

0.37

2.8

1.7

—

(3044290) Cell count panel - Cerebral spinal fluid

1.36

0.37

1.0

1.2

—

(3045783) Sodium and Potassium panel [Moles/volume] - Serum or Plasma

264

1.20

0.37

7.1

7.0

—

(3007461) Platelets [#/volume] in Blood

212

2086

1.36

0.36

22.3

21.1

257.4

258.4

e9/l

0.09

204

2031

(3010813) Leukocytes [#/volume] in Blood

212

2087

1.35

0.34

22.3

21.1

6.4

6.6

e9/l

0.38

202

2023

(3006140) Bilirubin.total [Moles/volume] in Serum or Plasma

102

1084

0.89

0.34

4.8

5.5

9.4

9.9

umol/l

0.42

1013

(3007220) Creatine kinase [Enzymatic activity/volume] in Serum or Plasma

642

1.13

0.34

3.0

2.0

106.8

141.0

u/l

1.35

599

(3003785) Carcinoembryonic Ag [Mass/volume] in Serum or Plasma

230

1.20

0.33

3.7

3.9

6.1

8.2

ug/l

0.25

190

(36031861) Influenza virus A and B and SARS-CoV-2 (COVID-19) and Respiratory syncytial virus RNA panel - Respiratory system specimen by NAA with probe detection

119

1.28

0.32

2.2

1.7

—

(3050380) Cytology report of Cervical or vaginal smear or scraping Cyto stain

1.34

0.32

1.7

1.4

—

(3027238) Thyroperoxidase Ab [Units/volume] in Serum or Plasma

138

1.25

0.31

1.1

1.2

80.7

158.9

iu/ml

—

(3024950) Chlamydia trachomatis DNA [Presence] in Urine by NAA with probe detection

0.71

0.31

2.0

1.7

—

(40763086) Leukocyte esterase [Presence] in Urine by Automated test strip

773

1.12

0.31

3.9

4.5

—

(3014111) Lactate [Moles/volume] in Serum or Plasma

166

1.23

0.31

3.2

5.4

1.3

1.4

mmol/l

0.18

159

(40764999) Glomerular filtration rate/1.73 sq M.predicted [Volume Rate/Area] in Serum, Plasma or Blood by Creatinine-based formula (CKD-EPI)

186

1814

1.16

0.30

12.6

13.4

76.3

76.4

ml/min/173m2

0.05

156

1464

(3001122) Ferritin [Mass/volume] in Serum or Plasma

814

1.11

0.30

3.2

2.8

100.5

92.5

ug/l

0.27

738

(3015377) Calcium [Moles/volume] in Serum or Plasma

765

0.89

0.30

2.6

3.0

2.4

mmol/l

0.06

661

(3009201) Thyrotropin [Units/volume] in Serum or Plasma

189

1846

1.16

0.29

6.5

5.4

14.9

1.9

mu/l

0.49

172

1681

(586526) SARS-CoV-2 (COVID-19) RNA [Presence] in Nasopharynx by NAA with probe detection

109

0.72

0.29

1.0

1.4

—

(3026989) Triiodothyronine (T3) Free [Moles/volume] in Serum or Plasma

109

0.72

0.29

20.8

2.9

5.8

4.4

pmol/l

—

(46235355) HIV 1 and 2 tests - Meaningful Use set

205

0.82

0.29

1.4

1.5

—

(40771025) 25-Hydroxyvitamin D3+25-Hydroxyvitamin D2 [Moles/volume] in Serum or Plasma

924

1.11

0.29

2.3

85.6

80.9

nmol/l

0.95

819

(3052851) Hemolysis interference index of Serum or Plasma

1.24

0.29

4.6

3.3

—

(3008898) HLA-B27 [Presence]

1.24

0.29

1.0

1.1

—

(1761868) Lipid panel - Serum or Plasma

621

0.89

0.29

3.4

3.2

—

(3022621) pH of Urine by Test strip

140

1.23

0.28

3.6

2.7

—

(3021440) Promyelocytes/100 leukocytes in Blood

150

1.22

0.27

3.8

4.2

0.1

0.2

—

(3015171) Extractable nuclear Ab [Units/volume] in Serum

1.31

0.26

1.1

1.3

—

1.5

—

(3010156) C reactive protein [Mass/volume] in Serum or Plasma by High sensitivity method

0.70

0.26

1.2

1.8

7.9

1.8

mg/l

—

(3029713) Protein.monoclonal band 1 [Mass/volume] in Serum or Plasma by Electrophoresis

0.69

0.26

1.0

3.1

0.0

1.0

g/l

—

(3001019) Free T4 and TSH panel - Serum or Plasma

1.23

0.25

1.6

1.8

—

(3002030) Lymphocytes/100 leukocytes in Blood

910

1.10

0.25

7.4

5.6

30.7

28.4

1.43

837

(40768793) Breast Pathology biopsy report

1.30

0.24

1.6

1.3

—

(3043723) Beta 1 globulin [Mass/volume] in Serum or Plasma by Electrophoresis

0.72

0.24

1.0

2.6

—

(3017895) Helicobacter pylori Ab [Units/volume] in Serum

0.72

0.24

1.2

1.5

—

(3026782) Osmolality of Urine

378

0.88

0.24

1.9

2.8

480.5

503.9

mosm/kgh2o

0.27

323

(3020564) Creatinine [Moles/volume] in Serum or Plasma

205

2020

1.19

0.24

17.2

16.9

70.9

70.8

umol/l

0.04

205

2020

(3006315) Basophils [#/volume] in Blood

101

964

1.09

0.22

7.2

5.2

0.0

e9/l

0.31

833

(3005772) Bilirubin.conjugated [Moles/volume] in Serum or Plasma

209

0.85

0.22

2.1

2.2

4.1

7.4

umol/l

2.07

183

(3022096) Basophils/100 leukocytes in Blood

865

1.09

0.22

7.5

5.5

0.8

0.7

0.97

794

(40769539) Bacteria identified based on 16S rRNA gene [Identifier] in Specimen by Sequencing

1.22

0.22

1.4

1.6

—

(3013115) Eosinophils [#/volume] in Blood

104

995

1.09

0.21

7.3

5.5

0.2

e9/l

0.80

876

(3017732) Neutrophils [#/volume] in Blood

126

1.20

0.21

2.8

2.5

3.1

4.3

e9/l

2.73

(3000012) Reticulocyte production index

0.00

0.21

0.0

1.7

—

(3012220) Varicella zoster virus IgM Ab [Presence] in Serum by Immunoassay

0.00

0.21

0.0

1.2

—

(3033386) Bacteria [Presence] in Cerebral spinal fluid by Light microscopy

0.00

0.21

0.0

1.1

—

(3029634) Reagin Ab [Titer] in Serum by VDRL

0.00

0.21

0.0

1.3

—

(21492711) Cytomegalovirus IgG Ab avidity [Presence] in Serum or Plasma by Immunoassay

0.00

0.21

0.0

1.2

—

(3006653) Thiamine [Moles/volume] in Blood

0.00

0.21

0.0

1.3

—

146.4

—

(3047189) Immunofixation for 24 hour Urine

0.00

0.21

0.0

2.2

—

(3051651) Icteric interference index of Serum or Plasma

0.00

0.21

0.0

2.5

—

(3037875) Bordetella parapertussis DNA [Presence] in Specimen by NAA with probe detection

0.00

0.21

0.0

1.5

—

(3008364) Apolipoprotein A-I [Mass/volume] in Serum or Plasma

0.00

0.21

0.0

1.3

—

(40764127) Haemophilus influenzae DNA [Presence] in Specimen by NAA with probe detection

0.00

0.21

0.0

1.5

—

(3013727) Leukocytes other/100 leukocytes in Blood

0.00

0.21

0.0

4.3

—

43.8

—

(3032699) Streptococcus pneumoniae DNA [Presence] in Specimen by NAA with probe detection

0.00

0.21

0.0

1.5

—

(40761536) Microorganisms panel - Urine sediment

166

0.83

0.21

2.9

4.2

—

(40758897) Direct antiglobulin test.IgG specific reagent [Presence] on Red Blood Cells

0.00

0.21

0.0

2.0

—

(3004451) EKG impression Narrative

0.00

0.21

0.0

1.4

—

(40758895) Direct antiglobulin test.complement C3d specific reagent [Presence] on Red Blood Cells

0.00

0.21

0.0

2.0

—

(3017704) Immunofixation for Urine

0.00

0.21

0.0

2.0

—

(3014791) Apolipoprotein B [Mass/volume] in Serum or Plasma

0.00

0.21

0.0

1.3

—

1.1

—

(3009035) Cobalamin (Vitamin B12) [Moles/volume] in Serum or Plasma

444

1.10

0.20

1.8

1.7

379.0

21098749.8

pmol/l

0.50

346

(3001604) Monocytes [#/volume] in Blood

100

957

1.08

0.20

7.2

5.2

0.5

0.6

e9/l

0.40

829

(37019628) Gastrointestinal bacterial pathogens panel - Stool by NAA with probe detection

1.26

0.20

2.0

1.2

—

(3000330) Specific gravity of Urine by Test strip

115

0.77

0.20

3.3

3.7

—

(3049539) Genetic diseases [Identifier] in Blood or Tissue by FISH Nominal

0.00

0.20

0.0

1.0

—

(3053028) Streptococcus sp identified in Specimen by Organism specific culture

0.00

0.20

0.0

1.3

—

(3012447) Hantavirus puumala IgG Ab [Titer] in Serum

0.00

0.20

0.0

1.2

—

(36306090) Helicobacter pylori [Presence] in Tissue by Organism specific culture

0.00

0.20

0.0

1.0

—

(3035999) Lactate [Moles/volume] in Cerebral spinal fluid

0.00

0.20

0.0

1.1

—

2.0

—

(3010838) Calcium [Moles/time] in 24 hour Urine

0.00

0.20

0.0

1.2

—

(3023511) Choriogonadotropin [Units/volume] in Urine

0.00

0.20

0.0

1.1

—

(3019473) Protein [Mass/volume] in Cerebral spinal fluid

1.21

0.20

1.2

386.3

474.1

mg/l

—

(36660697) Celiac disease serology panel - Serum

143

0.83

0.19

1.2

1.1

—

(3019069) Monocytes/100 leukocytes in Blood

900

1.08

0.18

7.6

5.7

8.3

8.4

0.08

835

(3016293) Bicarbonate [Moles/volume] in Serum or Plasma

100

1.21

0.18

3.8

5.5

27.0

25.4

mmol/l

0.40

100

(706163) SARS-CoV-2 (COVID-19) RNA [Presence] in Respiratory system specimen by NAA with probe detection

103

1070

0.93

0.18

2.9

2.7

—

(3049717) Cytology report of Urine Cyto stain

1.21

0.18

2.1

2.5

—

(3029937) Albumin [Presence] in Urine by Test strip

545

1.09

0.18

4.2

4.7

0.1

0.0

estimate

0.47

191

(4034850)

1.15

0.17

6.9

9.2

—

(3032080) INR in Blood by Coagulation assay

787

0.93

0.17

7.0

8.0

1.2

inr

0.03

234

(3019309) Folate [Moles/volume] in Red Blood Cells

409

1.09

0.17

1.6

1.7

1257.1

1273.2

nmol/l

0.03

301

(3007778) Kappa light chains/Lambda light chains [Mass Ratio] in Serum

0.75

0.17

1.0

4.9

—

4.2

—

(3011397) Hemoglobin [Presence] in Urine by Test strip

488

1.09

0.17

4.6

4.1

—

(3000492) Spirometry study

158

1.15

0.17

1.3

1.5

—

(3019198) Lymphocytes [#/volume] in Blood

102

983

1.07

0.16

7.3

5.2

2.2

2.0

e9/l

0.31

865

(3014576) Chloride [Moles/volume] in Serum or Plasma

235

1.12

0.16

4.3

5.2

102.9

103.3

mmol/l

0.20

227

(3026008) Bacteria identified in Urine by Culture

735

0.93

0.16

4.0

3.2

—

(3019832) Treponema pallidum Ab [Presence] in Serum

0.77

0.16

1.7

1.5

—

(42529406) Shigella sp [Presence] in Stool by Culture

0.75

0.16

1.5

1.2

—

(3014765) Yersinia sp identified in Stool by Organism specific culture

0.75

0.16

1.5

1.2

—

(3046870) Tissue transglutaminase IgG Ab [Units/volume] in Serum

1.21

0.15

1.2

1.0

—

(3006418) Campylobacter sp identified in Tissue by Organism specific culture

0.74

0.15

1.5

1.1

—

(3002179) Metamyelocytes/100 leukocytes in Blood

140

1.15

0.15

3.4

4.1

0.3

0.8

—

(43054903) Holo-transcobalamin II [Moles/volume] in Serum

856

1.07

0.15

2.0

105.9

100.6

pmol/l

0.34

368

(3009508) Creatinine [Moles/volume] in Urine

600

0.93

0.14

3.1

2.9

6.2

6.4

mmol/l

0.18

489

(3014218) Bicarbonate [Moles/volume] standard in Arterial blood

0.84

0.14

5.4

7.3

26.6

24.9

mmol/l

—

(3000494) Fungus identified in Specimen by Culture

252

0.90

0.13

1.5

1.3

—

(3017181) Myelocytes/100 leukocytes in Blood

161

1.13

0.13

3.8

4.1

0.6

0.9

—

(3021879) Hepatitis B virus core Ab [Presence] in Serum

109

0.82

0.13

1.6

1.3

—

(3051714) Fibrin D-dimer FEU [Mass/volume] in Platelet poor plasma

446

0.93

0.13

1.5

1.7

1.0

1.1

mg/l

0.03

352

(3013139) Helicobacter pylori Ag [Presence] in Stool

152

1.13

0.12

1.1

1.3

—

(3021614) Rheumatoid factor [Units/volume] in Serum or Plasma

394

0.93

0.12

1.3

39.9

37.3

iu/ml

0.06

145

(3018010) Neutrophils/100 leukocytes in Blood

901

1.06

0.12

7.6

5.3

55.6

56.9

0.57

837

(3037551) Cancer Ag 125 [Units/volume] in Serum or Plasma

172

1.11

0.12

1.2

3.2

16.7

58.5

u/ml

1.11

166

(3000991) Gas panel - Venous blood

153

1.12

0.11

3.0

6.3

—

(3017143) Hepatitis C virus Ab [Presence] in Serum

167

0.89

0.11

1.5

1.3

—

(40758558) Short blood count panel - Blood

524

0.94

0.11

7.7

6.8

—

(3019050) Tissue transglutaminase IgA Ab [Units/volume] in Serum

453

0.94

0.11

1.4

1.3

0.5

2.4

u/ml

—

123

(3022145) Colonoscopy Study observation

249

0.91

0.11

1.5

1.2

—

(3020044) Glucose [Moles/volume] in Cerebral spinal fluid

1.14

0.10

1.0

1.1

3.4

4.1

mmol/l

—

(3037756) Immunofixation for Serum or Plasma

1.14

0.10

1.2

2.0

—

(3024928) Oxygen saturation in Venous blood

1.11

0.10

1.0

2.2

—

(3027545) Mycoplasma pneumoniae Ab [Presence] in Serum by Immunoassay

1.09

0.09

1.6

1.4

—

(3046524) Influenza virus A Ag [Presence] in Nasopharynx by Immunoassay

1.09

0.09

1.4

1.3

—

(3043362) Influenza virus B Ag [Presence] in Nasopharynx by Immunoassay

1.09

0.09

1.4

1.3

—

(3024135) Streptococcus.beta-hemolytic [Presence] in Throat by Organism specific culture

321

1.07

0.09

1.4

—

(3025159) Blasts/100 leukocytes in Blood

145

1.11

0.09

4.1

4.2

0.2

—

(3006504) Eosinophils/100 leukocytes in Blood

896

1.05

0.09

7.5

5.4

2.9

2.7

0.31

827

(3010521) Mycoplasma pneumoniae IgM Ab [Presence] in Serum by Immunoassay

1.04

0.09

1.2

1.1

—

(3019284) Hepatitis B virus surface Ag [Presence] in Serum

196

0.91

0.09

1.5

1.4

—

(3042936) Bacteria identified in Isolate by Culture

267

0.93

0.09

1.8

2.0

—

(3024891) Influenza virus A+B Ag [Presence] in Specimen

1.05

0.08

1.0

1.2

—

(3014051) Protein [Presence] in Urine by Test strip

1.04

0.08

3.3

2.0

—

(46236952) Glomerular filtration rate/1.73 sq M.predicted [Volume Rate/Area] in Serum, Plasma or Blood by Creatinine-based formula (MDRD)

174

0.91

0.08

1.6

2.7

67.1

61.6

ml/min/173m2

—

(3016431) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Serum or Plasma

107

1049

1.04

0.07

4.3

5.7

1.2

mmol/l

0.75

891

(3000850) Epithelial cells [#/volume] in Urine

417

0.95

0.07

2.5

4.4

5.9

e6/l

0.65

371

(3029511) Human papilloma virus DNA [Presence] in Specimen by NAA with probe detection

0.82

0.07

1.9

1.4

—

(3013650) Neutrophils [#/volume] in Blood by Automated count

116

1142

1.03

0.06

8.8

8.5

3.9

4.0

e9/l

0.04

100

1010

(3041096) Erythrocytes [Presence] in Urine by Automated

535

0.96

0.05

2.8

3.9

—

(40768797) Stomach Pathology biopsy report

303

0.95

0.05

1.5

1.2

—

(3021589) Normoblasts [#/volume] in Blood

866

0.97

0.05

8.9

9.2

0.0

e9/l

1.06

714

(40760892) CBC W Ordered Manual Differential panel - Blood

436

1.04

0.05

3.9

4.3

—

(3026493) Urate [Moles/volume] in Serum or Plasma

494

0.96

0.05

2.0

2.5

331.5

9503.5

umol/l

3.44

416

(43054914) Glucose tolerance 2 hours panel - Serum or Plasma

189

1.06

0.05

1.4

1.7

—

(4035726)

201

0.94

0.04

1.4

—

(3044938) Influenza virus A RNA [Presence] in Specimen by NAA with probe detection

308

1.05

0.04

2.2

1.9

—

(3007164) IgA [Mass/volume] in Serum or Plasma

392

0.96

0.04

1.9

1.5

2.5

g/l

0.05

225

(3004588) Protein electrophoresis panel - Serum or Plasma

142

1.06

0.02

1.3

2.6

—

(21494755) Public health laboratory ask at order entry panel

103

1.07

0.02

1.2

1.3

—

(3020682) Albumin/Creatinine [Ratio] in Urine

618

0.98

0.01

3.7

3.8

2.2

5.8

mg/mmol

1.47

346

(3004716) Salmonella sp identified in Stool by Organism specific culture

116

0.95

0.01

2.3

1.3

—

(3019060) Gas panel - Arterial blood

124

1.05

0.00

4.5

4.7

—

(3025941) Bacteria identified in Stool by Culture

126

0.95

0.00

1.2

1.3

—

(3012516) Albumin [Mass/volume] in Urine

586

0.99

0.00

3.0

3.1

14.2

255.0

mg/l

0.87

341

(40761535) Cells panel - Urine sediment

176

1.02

0.00

4.7

3.4

—

(3033319) Streptococcus pyogenes Ag [Presence] in Throat

119

1.01

0.00

1.1

1.3

—

(3048689) Calprotectin [Mass/mass] in Stool

234

0.98

0.00

2.1

1.9

173.3

129.0

ug/g

0.37

183

(3019902) Methicillin resistant Staphylococcus aureus [Presence] in Specimen by Organism specific culture

199

1.01

0.00

2.1

3.5

—

(3035995) Alkaline phosphatase [Enzymatic activity/volume] in Serum or Plasma

154

1539

1.00

0.00

7.1

7.0

76.4

79.8

u/l

0.45

142

1425

(3026910) Gamma glutamyl transferase [Enzymatic activity/volume] in Serum or Plasma

118

1181

1.00

0.00

3.0

2.9

63.0

48.1

u/l

0.45

108

1089

(3010517) Carboxyhemoglobin/Hemoglobin.total in Venous blood

107

1.03

0.00

1.5

2.0

1.1

0.16

107

(3051552) Clostridioides difficile toxin genes [Presence] in Stool by NAA with probe detection

147

1.02

0.00

2.9

1.5

—

(4010399)

156

1.03

0.00

1.7

1.5

—

(3041942) Cyclic citrullinated peptide Ab [Units/volume] in Serum

382

0.99

0.00

1.3

17.2

12.4

u/ml

0.11

140

(3023368) Bacteria identified in Blood by Culture

488

1.01

0.00

3.9

3.7

—

(3003396) Base excess in Arterial blood by calculation

218

1.01

0.00

4.7

6.4

2.4

1.7

mmol/l

0.21

178

(3011831) Apolipoprotein B/Apolipoprotein A-I [Percentile]

0.00

0.0

1.3

—

(3000285) Sodium [Moles/volume] in Blood

0.00

0.0

1.0

—

(3035933) Granulocytes/100 leukocytes in Blood

0.00

0.0

1.0

—

(3021197) Magnesium Ionized [Moles/volume] in Serum or Plasma

0.00

0.0

1.7

—

(3050898) Methicillin resistant Staphylococcus aureus [Presence] in Genital specimen by Organism specific culture

0.00

0.0

2.0

—

(3010375) cycloSPORINE [Mass/volume] in Blood

0.00

0.0

30.9

—

92.9

—

(40766189) Gliadin peptide IgG Ab [Units/volume] in Serum by Immunoassay

1.02

0.00

1.2

1.1

—

11.2

—

(3022803) Oxygen [Partial pressure] adjusted to patient's actual temperature in Arterial blood

0.00

0.0

2.1

—

(3002434) Lupus erythematosus deoxynucleoproteins IgG Ab [Units/volume] in Serum by Immunoassay

0.87

0.00

1.8

—

(3044212) Herpes simplex virus 1+2 IgM Ab [Presence] in Cerebral spinal fluid

0.00

0.0

1.2

—

(3041145) Herpes simplex virus IgM Ab [Presence] in Serum by Immunoassay

0.00

0.0

1.2

—

(42868415) European tick borne encephalitis virus IgM Ab [Presence] in Cerebral spinal fluid by Immunoassay

0.00

0.0

1.2

—

(3037677) Mycoplasma pneumoniae IgM Ab [Titer] in Cerebral spinal fluid

0.00

0.0

1.2

—

(3026515) Parvovirus B19 IgM Ab [Units/volume] in Serum

0.00

0.0

1.2

—

(3001964) Herpes simplex virus Ag [Presence] in Specimen

0.00

0.0

1.3

—

(3014148) Varicella zoster virus Ab [Titer] in Serum

0.00

0.0

1.2

—

(40765096) Chromosome analysis panel by Banding

0.00

0.0

1.0

—

(3013293) Extractable nuclear Ab [Presence] in Serum

0.00

0.0

1.4

—

(3039602) Calcium.ionized [Moles/volume] adjusted to pH 7.4 in Capillary blood

0.00

0.0

2.3

—

1.2

—

(1002183) Plasma cells monotypic population [Identifier] in Bone marrow by Flow cytometry (FC)

0.00

0.0

1.2

—

(3020650) Glucose [Presence] in Urine

0.00

0.0

1.2

—

(3008486) Thyroxine (T4) free [Moles/volume] in Serum or Plasma

161

1610

1.00

0.00

5.7

4.5

14.8

14.9

pmol/l

0.42

144

1458

(3009550) Parvovirus B19 IgG Ab [Titer] in Serum

0.00

0.0

1.2

—

(3002148) Methylenedioxymethamphetamine [Presence] in Urine by Screen method

0.00

0.0

1.0

—

(3009306) Alpha-1-Fetoprotein [Mass/volume] in Serum or Plasma

0.00

0.0

2.2

—

(3024666) Lithium, Blood [Moles/volume] in Serum or Plasma

0.00

0.0

8.4

—

0.7

—

(3003129) Base excess in Capillary blood by calculation

0.00

0.0

1.0

—

3.7

—

(40761849) Varicella zoster virus IgG Ab [Units/volume] in Cerebral spinal fluid by Immunoassay

0.00

0.0

1.0

—

(40760888) Immunoglobulin light chains.free panel - Serum

0.96

0.00

1.0

5.5

—

(1761482) Bacteria [#/volume] in Urine by Culture

0.86

0.00

2.0

5.0

—

(3012544) pH of Venous blood

190

1.00

0.00

1.6

2.8

—

(37021550) Renin [Units/volume] in Plasma --upright

0.00

0.0

1.2

—

226.1

—

(3049714) Procollagen type I.N-terminal propeptide [Mass/volume] in Serum

0.00

0.0

2.2

—

72.7

—

(3022058) Hepatitis B virus DNA [Presence] in Serum or Plasma by NAA with probe detection

0.00

0.0

1.2

—

(3044936) Clostridioides difficile toxin A+B [Presence] in Stool by Immunoassay

0.00

0.0

1.0

—

(3002670) Multiple inhalant allergen IgE Ab [Units/volume] in Serum

0.00

0.0

1.2

—

(3023383) Lactate [Moles/volume] in Pleural fluid

0.00

0.0

1.0

—

4.9

—

(44806420)

0.00

0.0

2.6

—

(3000208) Alpha tocopherol [Moles/volume] in Serum or Plasma

0.00

0.0

1.1

—

30.2

—

(3002823) Mycoplasma pneumoniae IgG Ab [Units/volume] in Cerebral spinal fluid

0.00

0.0

1.2

—

(3002619) Bacteria identified in Specimen by Culture

0.00

0.0

1.2

—

(3029075) Extractable nuclear Ab panel - Serum

0.00

0.0

1.0

—

(40771527) Human papilloma virus E6+E7 mRNA [Presence] in Cervix by NAA with probe detection

0.00

0.0

1.9

—

(3045156) Carbon dioxide [Partial pressure] adjusted to patient's actual temperature in Arterial blood

0.00

0.0

2.1

—

(42868421) Varicella zoster virus IgM Ab [Presence] in Cerebral spinal fluid by Immunoassay

0.00

0.0

1.2

—

(3040370) OLANZapine [Moles/volume] in Serum or Plasma

0.00

0.0

1.4

—

125.8

—

(3021125) Hepatitis C virus RNA [Presence] in Serum or Plasma by NAA with probe detection

0.00

0.0

1.4

—

(3024403) Complement+Immunoglobulin [Units/volume] in Red Blood Cells

0.96

0.00

1.4

1.9

—

(40768446) Kidney Pathology biopsy report

0.00

0.0

1.0

—

(42869593) Oxyhemoglobin/Hemoglobin.total [Pure mass fraction] in Capillary blood

0.00

0.0

1.0

—

(3033799) Differential panel - Peritoneal fluid

0.00

0.0

1.2

—

Mortality – FinRegistry

↥

Association

Association between endpoint CD2_BENIGN_UTERINE_TUBES_LIGAMENTS and mortality.

Females

No data

Males

No data

Mortality risk

Mortality risk for people of age

years, who have CD2_BENIGN_UTERINE_TUBES_LIGAMENTS.

N-year risk	Females	Males
1	No data	No data
5	No data	No data
10	No data	No data
15	No data	No data
20	No data	No data

Relationships between endpoints

↥

Index endpoint: CD2_BENIGN_UTERINE_TUBES_LIGAMENTS – Benign neoplasm: Uterine tubes and ligaments

GWS hits: -

Endpoint

Case Overlap

Survival Analysis

Genetic Correlations

Genetic Signals

N (Jaccard index)

HR [CI]

rg [CI]

Hits

Coloc Hits

FinRegistry

FinnGen

FinRegistry

FinnGen

Loading data

Benign neoplasm: Uterine tubes and ligaments

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

1. Apply sex-specific rule

2. Check conditions

3. Check pre-conditions, main-only, mode, registry filters

4. Check minimum number of events

5. Include endpoints

6. Filter based on genotype QC (FinnGen only)

Similar endpoints

Case counts by codes

Summary Statistics

-FinRegistry-

Key figures

-FinnGen-

Key figures

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

CodeWAS (R11)

Matched cohort

LabWAS

Mortality – FinRegistry

Association

Females

Males

Mortality risk

Relationships between endpoints