Neurofibromatosis, type 1

Q17_NEUROFIBROMATOSIS_1

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Q85.00
  • Cause of death: ICD-10 Q85.00

2 out of 7 registries used, show all original rules.

244

4. Check minimum number of events

None

244

5. Include endpoints

None

244

6. Filter based on genotype QC (FinnGen only)

244

Control definitions (FinnGen only)

Control exclude
Q17_OTHER_CONGEN_MALFO

Extra metadata

First used in FinnGen datafreeze
DF12

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded (different definition than used in FinnGen).

-FinnGen-

Key figures

All Female Male
Number of individuals 244 149 95
Unadjusted period prevalence (%) 0.05 0.05 0.04
Median age at first event (years) 36.12 36.50 35.53

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

No data available

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
16
18
9.44
13.03
3.3
2.5
2.2
3.0
nmol/l
0.34
16
18
17
25
7.23
11.16
2.5
1.3
—
—
—
0
0
15
22
7.20
9.85
2.2
1.4
—
—
nmol/l
—
0
0
53
224
2.75
8.78
1.6
1.2
—
—
—
0
0
42
163
2.90
8.13
7.0
12.4
-0.5
1.1
mmol/l
1.32
27
127
117
737
2.13
7.67
2.6
1.9
—
—
—
0
0
119
758
2.11
7.55
7.3
6.7
1.2
1.2
mmol/l
2.94
112
697
33
121
3.00
7.03
7.6
7.1
23.1
24.9
mmol/l
3.05
33
121
39
157
2.77
7.03
1.3
1.3
—
—
—
0
0
122
822
1.97
6.28
8.3
7.4
1.2
1.2
mmol/l
1.50
102
712
94
602
1.91
5.44
4.2
6.3
1.1
1.1
inr
0.08
32
180
86
576
1.76
4.10
2.3
2.2
—
—
—
0
0
41
216
2.08
4.04
2.0
1.6
—
—
—
0
0
59
359
1.85
3.83
2.0
2.4
6.3
6.2
e6/l
0.03
54
316
6
6
10.21
3.51
5.2
3.3
64.2
41.2
nmol/l
—
6
6
20
84
2.50
3.32
6.2
17.6
—
—
—
0
0
11
33
3.44
3.23
3.8
3.2
1.1
3.1
mmol/l
—
5
23
11
33
3.44
3.23
3.8
3.2
4.7
5.1
kpa
1.07
11
33
11
33
3.44
3.23
3.8
3.2
9.3
8.9
kpa
0.42
11
33
71
478
1.68
3.22
3.8
3.4
0.0
0.0
estimate
0.80
21
175
28
140
2.13
3.15
8.6
10.1
—
—
—
0
0
90
651
1.61
3.05
3.7
3.3
30.6
44.2
e6/l
0.45
74
428
20
88
2.39
3.03
12.0
12.8
1.2
1.6
%
0.88
20
88
72
496
1.64
2.96
2.7
2.7
0.8
0.4
e6/l
0.35
62
357
73
506
1.63
2.93
5.5
3.4
7.4
7.4
ph
0.72
19
85
20
91
2.30
2.82
5.1
10.1
—
—
—
0
0
76
540
1.59
2.73
2.8
2.8
35.2
153.9
e6/l
0.47
66
404
19
87
2.28
2.65
12.6
13.1
0.6
0.7
%
0.28
19
87
41
250
1.77
2.62
2.1
2.2
29.4
29.8
s
0.25
41
242
11
38
2.98
2.61
5.7
3.4
58.0
56.7
%
0.09
11
38
17
345
0.45
2.61
1.4
1.2
1.1
6.5
u/ml
—
5
136
40
243
1.77
2.58
2.3
2.2
—
—
—
0
0
70
499
1.56
2.46
2.6
2.6
—
—
—
0
0
61
421
1.60
2.45
4.3
3.1
—
—
—
0
0
11
40
2.83
2.41
4.0
3.0
7.4
7.4
ph
0.10
11
33
49
334
1.58
2.06
2.4
2.5
648.5
566.0
mosm/kgh2o
1.05
44
286
10
38
2.70
2.03
1.5
2.9
3.9
4.5
e9/l
—
10
38
8
26
3.15
2.03
2.0
1.2
—
—
—
0
0
77
587
1.46
1.92
2.7
3.1
22.4
23.7
ng/l
0.08
44
343
89
699
1.43
1.89
4.4
4.9
34.7
36.7
g/l
2.41
80
660
13
59
2.27
1.87
6.8
5.3
—
—
—
0
0
30
185
1.71
1.86
12.2
7.3
106.2
104.4
mmol/l
1.14
30
180
33
209
1.67
1.86
1.9
1.5
—
—
—
0
0
26
154
1.77
1.85
5.6
4.3
1.2
2.1
mmol/l
0.64
17
119
114
939
1.40
1.84
6.8
6.1
10.9
11.9
umol/l
0.38
107
892
5
12
4.23
1.83
1.2
1.6
16.2
18.3
ug/l
—
5
12
114
943
1.39
1.78
5.0
4.3
0.0
0.0
estimate
0.50
23
176
26
156
1.75
1.78
5.6
4.4
—
—
—
0
0
8
175
0.44
1.65
1.4
1.4
—
—
—
0
0
114
956
1.36
1.58
3.7
3.1
0.0
0.0
estimate
0.00
24
165
113
947
1.36
1.57
3.8
3.1
0.0
0.0
estimate
0.00
19
177
211
1968
1.53
1.48
17.7
12.6
139.3
139.7
mmol/l
1.29
204
1906
55
413
1.43
1.46
4.8
4.5
—
—
—
0
0
5
123
0.39
1.41
1.0
1.1
—
—
—
0
0
23
352
0.62
1.40
1.3
1.3
11.2
29.3
iu/ml
—
5
119
70
553
1.37
1.39
2.4
2.6
48.4
56.7
u/l
2.08
61
520
211
1975
1.51
1.38
17.7
12.6
3.9
3.9
mmol/l
0.03
204
1909
72
575
1.36
1.33
3.1
3.4
2.4
2.4
mmol/l
0.28
65
511
11
55
2.05
1.29
6.7
5.8
1.2
1.3
mg/l
0.61
11
49
5
18
2.81
1.29
2.0
3.8
—
—
—
0
0
144
1280
1.30
1.23
3.5
3.2
—
—
—
0
0
42
554
0.71
1.23
2.0
2.1
—
—
—
0
0
5
19
2.66
1.22
1.2
1.2
—
—
—
0
0
6
128
0.46
1.20
2.7
2.5
6.9
4.1
e9/l
—
6
107
147
1315
1.30
1.17
4.5
3.8
—
—
—
0
0
20
300
0.64
1.12
1.4
2.3
76.0
118.3
ug/g
0.64
14
240
61
491
1.32
1.06
5.3
6.5
—
—
—
0
0
7
34
2.09
1.03
2.0
2.6
26.6
25.0
mmol/l
—
7
29
17
108
1.62
0.99
1.2
1.2
—
—
—
0
0
54
432
1.32
0.98
2.6
3.2
—
—
—
0
0
23
160
1.48
0.93
2.9
3.2
—
—
—
0
0
6
28
2.17
0.92
6.2
2.5
—
—
—
0
0
6
29
2.10
0.90
11.5
4.1
—
—
—
0
0
155
1426
1.24
0.85
7.5
6.8
75.8
75.7
u/l
0.00
144
1335
86
746
1.24
0.82
4.1
2.9
—
—
—
0
0
8
47
1.73
0.81
1.0
1.4
—
—
—
0
0
6
33
1.84
0.79
1.7
1.2
—
—
—
0
0
6
33
1.84
0.79
2.0
4.4
35.5
35.3
umol/l
—
6
28
52
427
1.28
0.79
4.4
3.2
1.0
1.0
kg/l
—
7
56
6
34
1.78
0.77
1.5
3.0
11.3
40.3
u/ml
—
6
34
9
54
1.69
0.75
3.7
2.8
—
—
—
0
0
60
505
1.25
0.74
2.9
2.5
—
—
—
0
0
5
25
2.02
0.73
1.0
1.4
—
—
—
0
0
5
26
1.94
0.71
1.8
1.5
—
—
—
0
0
5
26
1.94
0.71
1.8
1.5
—
—
—
0
0
5
26
1.94
0.71
1.8
1.5
—
—
—
0
0
5
26
1.94
0.71
1.4
1.5
—
—
—
0
0
5
26
1.94
0.71
1.8
1.5
—
—
—
0
0
9
58
1.57
0.70
1.1
1.4
446.7
406.9
mg/l
—
9
53
65
752
0.82
0.70
2.6
2.4
—
—
—
0
0
51
425
1.25
0.69
1.8
1.8
0.7
0.8
mg/l
0.18
40
331
36
445
0.78
0.69
1.7
1.7
—
—
—
0
0
39
316
1.28
0.66
3.4
3.1
532.6
290.1
ng/l
0.20
23
213
5
28
1.80
0.66
2.0
2.6
—
—
—
0
0
5
29
1.74
0.64
1.0
1.1
—
—
—
0
0
16
113
1.45
0.63
1.7
2.4
373.2
849.1
u/l
—
6
42
8
50
1.62
0.62
1.0
1.1
—
—
—
0
0
173
1819
0.83
0.61
3.5
3.4
1.2
1.3
mmol/l
0.72
153
1701
0
20
0.00
0.60
0.0
1.3
—
—
—
0
0
0
23
0.00
0.58
0.0
1.1
—
—
—
0
0
43
508
0.81
0.56
1.4
1.4
1.9
2.1
g/l
0.50
32
299
27
335
0.78
0.54
1.4
1.8
—
—
—
0
0
12
83
1.47
0.53
2.0
2.2
—
—
—
0
0
20
153
1.33
0.52
1.5
2.2
10.3
10.0
g/l
0.11
20
139
27
332
0.79
0.51
1.2
1.5
—
—
—
0
0
7
47
1.50
0.48
1.7
1.9
—
—
—
0
0
19
147
1.32
0.47
4.6
4.6
1.0
0.9
%
—
5
46
5
81
0.61
0.46
1.4
1.2
—
—
—
0
0
14
103
1.38
0.46
1.8
2.7
9.7
5.7
ug/l
0.33
14
94
13
95
1.39
0.44
3.3
6.7
—
—
—
0
0
5
31
1.63
0.43
2.8
2.5
—
—
—
0
0
8
56
1.44
0.43
1.6
2.0
142.7
196.2
ug/l
—
8
48
183
1896
0.86
0.42
3.8
3.8
1.5
1.5
mmol/l
0.12
166
1775
26
214
1.24
0.41
2.6
2.4
27.1
24.7
%
0.25
21
187
0
15
0.00
0.41
0.0
2.7
—
—
—
0
0
0
15
0.00
0.41
0.0
3.0
—
—
—
0
0
123
1154
1.13
0.41
10.0
9.1
4.5
4.0
e9/l
1.62
108
1009
37
317
1.20
0.41
1.7
1.6
366.4
460.2
pmol/l
2.16
27
281
0
18
0.00
0.40
0.0
1.5
—
32.8
—
0
18
19
152
1.27
0.38
1.4
3.9
2.5
9.6
ug/l
1.50
14
118
49
546
0.87
0.34
1.5
1.4
1.5
2.0
u/ml
0.17
13
134
70
641
1.13
0.34
7.8
5.4
—
—
—
0
0
15
120
1.27
0.31
3.5
6.0
5.0
5.1
kpa
0.20
15
114
24
280
0.84
0.30
1.2
1.3
—
—
—
0
0
11
85
1.31
0.28
2.7
2.5
—
—
—
0
0
175
1697
1.11
0.28
3.9
4.7
36.1
38.5
mmol/mol
4.23
161
1607
8
64
1.26
0.27
6.4
7.2
—
—
—
0
0
5
73
0.68
0.26
1.0
1.2
—
—
—
0
0
11
138
0.79
0.26
1.2
1.3
—
35.8
—
0
10
160
1548
1.10
0.26
4.5
3.7
14.8
14.6
pmol/l
0.29
148
1417
186
1905
0.90
0.25
3.9
3.8
4.7
4.7
mmol/l
0.01
170
1794
218
2145
1.15
0.24
14.2
10.4
—
—
—
0
0
26
228
1.16
0.24
1.2
1.3
—
—
—
0
0
15
125
1.21
0.23
1.3
1.6
3.7
1.4
g/l
0.37
15
113
15
125
1.21
0.23
1.3
1.4
—
—
—
0
0
17
199
0.84
0.22
1.3
1.3
—
—
—
0
0
23
201
1.16
0.22
1.5
1.4
—
—
—
0
0
13
107
1.23
0.22
1.3
1.2
—
—
—
0
0
5
42
1.19
0.21
13.8
4.8
3.8
3.9
mmol/l
—
5
37
5
42
1.19
0.21
2.8
3.1
—
—
—
0
0
0
11
0.00
0.21
0.0
7.3
—
—
—
0
0
0
10
0.00
0.21
0.0
39.7
—
135.7
—
0
10
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
0
12
0.00
0.21
0.0
6.8
—
0.6
—
0
12
0
12
0.00
0.21
0.0
1.2
—
—
—
0
0
0
12
0.00
0.21
0.0
1.0
—
1630.7
—
0
12
5
43
1.17
0.21
1.2
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.2
—
—
—
0
0
0
13
0.00
0.21
0.0
1.2
—
214.2
—
0
13
0
13
0.00
0.21
0.0
1.0
—
—
—
0
0
19
218
0.86
0.20
1.9
1.9
—
—
—
0
0
0
14
0.00
0.20
0.0
1.1
—
—
—
0
0
0
14
0.00
0.20
0.0
1.1
—
—
—
0
0
0
14
0.00
0.20
0.0
1.2
—
—
—
0
0
0
14
0.00
0.20
0.0
1.3
—
—
—
0
0
6
52
1.16
0.19
1.7
1.7
—
—
—
0
0
95
909
1.07
0.18
10.0
8.0
0.0
0.0
e9/l
0.50
77
733
5
66
0.75
0.17
1.2
1.9
1.3
1.5
g/l
—
5
58
8
68
1.18
0.17
1.8
1.8
—
—
—
0
0
199
1958
1.09
0.17
15.2
12.4
40.9
40.7
%
0.17
138
1591
41
441
0.92
0.16
3.2
3.9
3.3
9.9
mg/mmol
1.58
33
278
29
317
0.90
0.16
2.0
1.6
—
—
—
0
0
10
83
1.21
0.15
2.0
2.2
21.1
21.9
s
—
10
76
92
956
0.94
0.15
5.7
5.6
60.7
56.0
%
2.84
86
913
11
93
1.19
0.15
1.1
1.4
—
—
—
0
0
14
160
0.87
0.14
2.3
1.6
—
—
—
0
0
14
159
0.87
0.13
2.4
1.6
—
—
—
0
0
14
159
0.87
0.13
2.3
1.6
—
—
—
0
0
14
159
0.87
0.13
2.1
1.6
—
—
—
0
0
11
94
1.18
0.13
1.2
1.1
—
—
—
0
0
16
142
1.14
0.13
2.7
4.5
—
—
—
0
0
190
1926
0.94
0.12
4.2
4.2
2.9
2.8
mmol/l
0.44
172
1799
57
544
1.06
0.12
2.6
2.7
—
—
—
0
0
23
211
1.10
0.11
2.8
2.5
0.8
0.6
ug/l
0.59
16
120
13
146
0.88
0.10
1.8
1.6
—
—
—
0
0
6
57
1.05
0.08
1.2
1.2
—
—
—
0
0
231
2296
1.11
0.08
21.8
16.7
258.0
255.7
e9/l
0.22
223
2242
10
113
0.88
0.08
2.8
2.0
—
—
—
0
0
5
60
0.83
0.08
1.2
1.1
—
—
—
0
0
64
620
1.04
0.08
1.7
1.8
92.6
95.9
pmol/l
0.22
38
321
7
68
1.03
0.08
1.7
1.6
—
—
—
0
0
41
428
0.95
0.08
2.1
2.7
341.6
5331.8
umol/l
1.78
34
377
6
72
0.83
0.07
4.7
2.6
—
—
—
0
0
10
111
0.90
0.06
2.1
2.1
—
—
—
0
0
143
1412
1.03
0.06
3.3
3.8
11.3
9.5
mm/h
0.66
131
1315
231
2299
1.09
0.05
21.8
16.6
88.4
90.1
fl
7.13
226
2266
22
209
1.06
0.04
1.2
1.2
—
—
—
0
0
231
2300
1.08
0.04
21.9
16.6
4.6
4.6
e12/l
1.44
223
2241
231
2300
1.08
0.04
21.8
16.5
29.6
30.1
pg
4.17
226
2267
49
477
1.03
0.04
3.7
4.5
—
—
—
0
0
202
2032
0.97
0.04
14.1
11.5
25.5
22.0
mg/l
0.60
160
1516
98
994
0.98
0.04
5.9
5.5
0.6
0.6
e9/l
2.73
85
876
231
2301
1.07
0.03
22.0
16.7
7.0
6.6
e9/l
2.27
222
2243
92
908
1.02
0.03
6.4
5.7
0.7
0.7
%
0.02
86
861
231
2302
1.07
0.02
22.0
16.8
136.9
136.9
g/l
0.02
226
2267
41
419
0.97
0.02
2.5
3.2
1072.4
66.0
mg/l
0.46
31
267
16
167
0.96
0.01
2.8
2.9
1.5
1.7
%
0.47
16
153
93
938
0.99
0.01
6.4
5.6
2.6
2.8
%
0.46
88
888
52
513
1.02
0.01
1.5
1.6
1.3
1.4
mmol/l
0.60
47
437
95
943
1.01
0.01
6.4
5.9
9.6
8.3
%
2.89
90
899
103
1023
1.01
0.01
6.1
6.0
0.2
0.2
e9/l
0.28
90
915
12
126
0.95
0.00
1.8
1.6
—
—
—
0
0
20
194
1.03
0.00
1.9
1.5
—
—
—
0
0
100
994
1.01
0.00
5.9
5.5
0.0
0.0
e9/l
0.72
86
877
182
1824
0.99
0.00
3.8
3.8
5.5
5.8
mmol/l
4.01
164
1694
184
1839
1.00
0.00
5.1
4.4
1.8
1.8
mu/l
0.17
169
1712
97
972
1.00
0.00
6.2
5.7
24.3
29.6
%
4.33
92
925
13
133
0.98
0.00
4.3
3.2
—
—
—
0
0
13
126
1.03
0.00
1.4
1.8
—
—
—
0
0
26
256
1.02
0.00
1.9
1.6
928.0
1180.7
nmol/l
0.99
20
193
102
1023
0.99
0.00
5.8
5.6
1.7
1.9
e9/l
1.45
89
918
59
595
0.99
0.00
1.4
1.6
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
7
70
1.00
0.00
1.1
1.6
—
—
—
0
0
0
7
0.00
0.00
0.0
1.6
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
168.6
—
0
7
0
7
0.00
0.00
0.0
1.6
—
—
—
0
0
5
50
1.00
0.00
1.4
1.3
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.9
—
182.0
—
0
8
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
83.2
—
0
5
0
5
0.00
0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
16.4
—
0
5
0
9
0.00
0.00
0.0
8.4
—
—
—
0
0
6
65
0.92
0.00
1.0
1.2
—
—
—
0
0
0
6
0.00
0.00
0.0
5.7
—
—
—
0
0
0
6
0.00
0.00
0.0
8.3
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0

Mortality – FinRegistry

This endpoint is excluded (different definition than used in FinnGen).

Relationships between endpoints

Index endpoint: Q17_NEUROFIBROMATOSIS_1 – Neurofibromatosis, type 1

GWS hits: -

This endpoint is excluded (different definition than used in FinnGen).