Phakomatoses, not elsewhere classified

Q17_PHAKOMATOSES_NOT_ELSEW_CLASSIFIED

Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Q85
  • Cause of death: ICD-10 Q85

2 out of 7 registries used, show all original rules.

420

4. Check minimum number of events

None

420

5. Include endpoints

None

420

6. Filter based on genotype QC (FinnGen only)

420

Control definitions (FinnGen only)

Control exclude
Q17_OTHER_CONGEN_MALFO

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
Q8
Name in latin
Phacomatoses non alibi classificatae

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 3534 1781 1742
Only index persons 2959 1519 1440
Unadjusted period prevalence (%)
Whole population 0.05 0.05 0.05
Only index persons 0.06 0.06 0.05
Median age at first event (years)
Whole population 24.21 27.82 20.38
Only index persons 27.09 30.36 23.64

-FinnGen-

Key figures

All Female Male
Number of individuals 420 241 179
Unadjusted period prevalence (%) 0.08 0.08 0.08
Median age at first event (years) 36.12 36.50 35.61

-FinRegistry-

Age distribution of first events

-FinnGen-

Age distribution of first events

-FinRegistry-

Year distribution of first events

-FinnGen-

Year distribution of first events

-FinRegistry-

Cumulative Incidence Function

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
373
Matched controls
3730
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
Q85.00
ICD-10 Finland
Neurofibromatosis, type 1
+∞
255.7
215
*
Q85.09
ICD-10 Finland
Unspecified neurofibromatosis
2303.8
159.4
143
*
Z31.5
ICD-10 Finland
Genetic counselling
20.4
95.0
151
120
Q85.0
ICD-10 Finland
Neurofibromatosis (nonmalignant)
+∞
90.4
83
*
Q85.1
ICD-10 Finland
Tuberous sclerosis
+∞
75.6
70
*
Q85.01
ICD-10 Finland
Neurofibromatosis, type 2
+∞
65.6
61
*
AA1CG
NOMESCO Finland
Extensive MRI examination of brain with high intensity magnet
10.9
56.6
118
152
2377A
ICD-9 Finland
Neoplasm of uncertain behaviour of endocrine glands and nervous system, Neurofibromatosis
+∞
52.3
49
*
Z01.0
ICD-10 Finland
Examination of eyes and vision
5.6
40.0
138
352
QBE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin of trunk
9.9
36.5
77
95
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
9.5
34.2
74
95
74340
ICD-8 Finland
Other congenital anomalies of nervous system, Neurofibromatosis
+∞
33.9
32
*
Q85.9
ICD-10 Finland
Phakomatosis, unspecified
+∞
31.7
30
*
111
Kela drug reimbursment
Epilepsy and comparable convulsive disorders
7.5
24.4
60
93
Q85.82
ICD-10 Finland
of Hipple-Lindau syndrome
+∞
24.2
23
*
QDE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in lower limb
11.7
23.0
43
41
D33.30
ICD-10 Finland
Acoustic neuroma
43.1
23.0
28
7
QCE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in upper limb
13.2
19.5
34
28
XCK00
NOMESCO Finland
Perimetry
7.1
19.5
49
78
NA7DG
NOMESCO Finland
Spine and spinal cord very extensive MRI examination with high intensity magnet
26.7
18.5
25
10
D36.1
ICD-10 Finland
Benign neoplasm: Peripheral nerves and autonomic nervous system
55.4
18.1
21
*
N03AF02
ATC
oxcarbazepine; oral
9.8
17.3
35
39
AA1DG
NOMESCO Finland
Very extensive MRI examination of brain with high intensity magnet
7.9
17.3
40
56
NA7CG
NOMESCO Finland
Spine and spinal cord extensive MRI examination with high intensity magnet
14.3
16.8
28
21
NDR20
NOMESCO Finland
Incomplete excision of soft tissue tumour of wrist or hand
19.0
16.7
25
14
ZXC10
NOMESCO Finland
Use of laser
12.6
15.3
27
23
TQX10
NOMESCO Finland
Biopsy of skin and subcutaneous tissue
4.5
14.8
55
139
ACB19
NOMESCO Finland
Excision of lesion of peripheral nerve other or unspecified
83.5
14.7
16
*
Q82.50
ICD-10 Finland
Naevus flammeus
+∞
14.7
14
*
QAA25
NOMESCO Finland
Destruction of lesion of head or neck
14.2
14.4
24
18
WX402
NOMESCO Finland
General anaesthesia
3.0
13.9
91
362
G40.9
ICD-10 Finland
Epilepsy, unspecified
7.7
13.9
32
45
XA800
NOMESCO Finland
Neuropsychological investigation
5.4
13.8
42
86
G40.22
ICD-10 Finland
Complex partial epileptic seizure with secondary generalization
10.7
13.7
26
26
Q85.80
ICD-10 Finland
Peutz-Jegher syndrome
+∞
13.6
13
*
182
Kela drug reimbursment
Brivaracetam, eslikarbazepin, gabapentin, lacosamide, levetiracetam, perampanel, pregabalin, tiagabin and zonisamide
9.1
13.5
28
33
WX408
NOMESCO Finland
General anesthesy, balanced
2.5
13.1
127
636
WX404
NOMESCO Finland
Intravenous generell anesthesy
2.7
13.1
108
494
QA4S1
NOMESCO Finland
Photography of skin or subcutaneous tissue in face
72.4
12.7
14
*
WX002
NOMESCO Finland
Sedation and analgesia
2.9
12.4
84
340
183
Kela drug reimbursment
Lamotrigin and topiramate
13.0
12.3
21
17
G40.29
ICD-10 Finland
Localization-related (focal)(partial) symptomatic epilepsy and epileptic syndromes with complex partial seizures
9.4
11.9
24
27
AAB00
NOMESCO Finland
Extirpation of intracranial lesion
13.1
11.8
20
16
D48.9
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Neoplasm of uncertain or unknown behaviour, unspecified
14.2
11.6
19
14
Q85.83
ICD-10 Finland
Gardner syndrome
+∞
11.5
11
*
QBA25
NOMESCO Finland
Destruction of lesion of skin of trunk
12.4
11.5
20
17
ZXC07
NOMESCO Finland
Carbon dioxide laser
36.2
11.3
14
*
XCW99
NOMESCO Finland
Other investigative procedure of eye
3.7
11.2
51
155
181
Kela drug reimbursment
Retigabine and vigabatrin
44.7
11.0
13
*
N03AG04
ATC
vigabatrin; oral
44.7
11.0
13
*
ABB00
NOMESCO Finland
Excision of lesion of spinal canal
44.7
11.0
13
*
TPH07
NOMESCO Finland
Cathetrisation of artery
3.6
10.8
50
154
QAA40
NOMESCO Finland
Laser therapy or photocoagulation of skin of head or neck
29.0
10.8
14
5
9736
FHL
Subcutaneous tumor removal in operating room or anesthesia
22.2
10.8
15
7
TQW99
NOMESCO Finland
Other minor procedure on skin
5.4
10.8
32
64
CK2X4
NOMESCO Finland
Optical coherence tomography (OCT) of ocular fundus
4.0
10.7
43
117
N03AX14
ATC
levetiracetam; systemic
6.4
10.5
27
45
ZXC12
NOMESCO Finland
Pulse colorlaser
113.1
10.5
11
*
L81.3
ICD-10 Finland
Café au lait spots
113.1
10.5
11
*
Q85.88
ICD-10 Finland
Other phakomatoses, not elsewhere classified
+∞
10.5
10
*
G40.20
ICD-10 Finland
Complex partial seizures with only alteration of consciousness
16.6
10.4
16
10
N03AG01
ATC
valproic acid; systemic, rectal
4.1
10.4
41
110
D23.5
ICD-10 Finland
Benign neoplasm: Skin of trunk
7.8
10.3
23
31
D48.1
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Connective and other soft tissue
10.5
10.1
19
19
D33.45
ICD-10 Finland
Benign Schwannom in the nerve root of the spinal cord
41.3
10.0
12
*
G40.10
ICD-10 Finland
Simple partial seizures
20.7
9.9
14
7
XCK10
NOMESCO Finland
Photography of fundus of eye
3.5
9.8
47
149
AA1CM
NOMESCO Finland
Extensive MRI examination of brain with 3 Tesla magnet
7.1
9.8
23
34
QXA40
NOMESCO Finland
Skin laser treatment or photocoagulation, unspecified location
+∞
9.4
9
*
D21.1
ICD-10 Finland
Benign neoplasm: Connective and other soft tissue of upper limb, including shoulder
14.1
9.3
15
11
QBB10
NOMESCO Finland
Major dressing of wound of skin of trunk
6.4
9.1
23
38
D32.00
ICD-10 Finland
Benign tumor of the meninges on the outer surface of the cerebrum
13.0
8.9
15
12
ZXA00
NOMESCO Finland
Right side
2.3
8.8
96
495
Z01.1
ICD-10 Finland
Examination of ears and hearing
2.6
8.8
65
276
N03AF01
ATC
carbamazepine; oral, rectal
4.7
8.8
29
66
QBA40
NOMESCO Finland
Laser therapy or photocoagulation of skin of trunk
51.2
8.7
10
*
NA1CG
NOMESCO Finland
Cervical spine extensive MRI examination with high intensity magnet
8.5
8.7
18
22
N05BA09
ATC
clobazam; oral
10.4
8.6
16
16
ABB10
NOMESCO Finland
Resection of lesion of spinal canal
92.1
8.4
9
*
QDA40
NOMESCO Finland
Laser therapy or photocoagulation of skin of lower limb
92.1
8.4
9
*
D41.0
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Kidney
8.8
8.4
17
20
9560/0-C72.4
ICD-O-3
Schwannoma, NOS, of acoustic nerve
+∞
8.4
8
*
Q85.81
ICD-10 Finland
Sturge-Weber syndrome
+∞
8.4
8
*
QAE40
NOMESCO Finland
Repair of anomaly or lesion after disease of skin of head or neck
+∞
8.4
8
*
DE2CG
NOMESCO Finland
Acoustic channel extensive MRI examination with high intensity magnet
17.7
8.1
12
7
XCD10
NOMESCO Finland
Electrophysiological examination of eye
7.5
8.1
18
25
NK1AT
NOMESCO Finland
Muscle biopsy with ultrasound guidance
22.6
8.1
11
5
WX700
NOMESCO Finland
Respiratory and circulatory monitoring
2.4
7.8
67
307
Z80.0
ICD-10 Finland
Family history of malignant neoplasm of digestive organs
15.4
7.8
12
8
AA1BG
NOMESCO Finland
Standard MRI examination of brain with high intensity magnet
2.9
7.7
47
175
G40.19
ICD-10 Finland
Localization-related (focal)(partial) symptomatic epilepsy and epileptic syndromes with simple partial seizures
18.8
7.6
11
6
G40.12
ICD-10 Finland
Simple partial seizures with secondary generalization
10.3
7.6
14
14
SPAT1229
SPAT
Assessment of need for aid
3.8
7.5
30
83
22550
ICD-8 Finland
Benign neoplasm of brain and other parts of nervous system, Peripheral nerves
81.7
7.4
8
*
QCA25
NOMESCO Finland
Destruction of lesion of skin of upper limb
81.7
7.4
8
*
D37.7
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Other digestive organs
7.1
7.4
17
25
R4120
NOMESCO Finland
Occupational therapy
3.2
7.3
38
129
D33.46
ICD-10 Finland
Benign neurofibroma in the nerve root of the spinal cord
+∞
7.3
7
*
QCA40
NOMESCO Finland
Laser therapy or photocoagulation of skin of upper limb
+∞
7.3
7
*
7595A
ICD-9 Finland
Other and unspecified congenital anomalies, Tuberous sclerosis
+∞
7.3
7
*
D33.4
ICD-10 Finland
Benign neoplasm: Spinal cord
+∞
7.3
7
*
CK2L4
NOMESCO Finland
Wide-field/panoramic imaging of ocular fundus
16.1
7.3
11
7
NFR20
NOMESCO Finland
Incomplete excision of soft tissue tumour of hip or thigh
30.7
7.2
9
*
D32.1
ICD-10 Finland
Benign neoplasm: Spinal meninges
30.7
7.2
9
*
JN3BD
NOMESCO Finland
Extensive abdominal CT
2.8
7.0
45
175
N05BA01
ATC
diazepam; systemic, rectal
2.5
7.0
56
245
KH1AE
NOMESCO Finland
Urinary tract ultrasound examination
3.6
7.0
30
88
S18
ICPC
Laceration/cut
1.9
7.0
144
944
Z03.3
ICD-10 Finland
Observation for suspected nervous system disorder
3.4
7.0
32
99
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
2.0
7.0
98
558
CS424
NOMESCO Finland
Visual field testing with Goldmann perimetry
14.1
6.9
11
8
ZXA05
NOMESCO Finland
Left side
2.1
6.9
84
454
GD1AA
NOMESCO Finland
Thorax X-ray examination
1.8
6.9
142
934
H47.2
ICD-10 Finland
Optic atrophy
40.8
6.8
8
*
QDA25
NOMESCO Finland
Destruction of lesion of skin of lower limb
17.1
6.8
10
6
R4110
NOMESCO Finland
Physiotherapy
2.0
6.8
100
582
QXA25
NOMESCO Finland
Destruction of lesion of skin, site unspecified
5.7
6.7
18
33
KA1AE
NOMESCO Finland
Kidney ultrasound examination
6.1
6.7
17
29
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
2.3
6.6
62
297
AA1AD
NOMESCO Finland
CT of head and brain
2.1
6.5
73
380
WX1DG
NOMESCO Finland
Very extensive total body MRI with high intensity magnet
71.0
6.4
7
*
D48.2
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Peripheral nerves and autonomic nervous system
71.0
6.4
7
*
D31.2
ICD-10 Finland
Benign neoplasm: Retina
71.0
6.4
7
*
NGR20
NOMESCO Finland
Intralesional or marginal excision of tumor of knee or lower leg
71.0
6.4
7
*
SPAT1153
SPAT
Removal of sutures
1.9
6.4
107
649
K56.6
ICD-10 Finland
Other and unspecified intestinal obstruction
6.7
6.4
15
23
JN1DG
NOMESCO Finland
Very extensive MRI examination of upper part of abdomen with high intensity magnet
6.7
6.4
15
23
N03AX12
ATC
gabapentin; oral
2.3
6.3
57
267
G40.4
ICD-10 Finland
Other generalized epilepsy and epileptic syndromes
18.4
6.3
9
5
N03AB02
ATC
phenytoin; systemic
18.4
6.3
9
5
NE1DG
NOMESCO Finland
Pelvic, hip and femur very extensive MRI examination with high intensity magnet
18.4
6.3
9
5
340
Kela drug reimbursment
Everolimus
+∞
6.3
6
*
H52.2
ICD-10 Finland
Astigmatism
5.9
6.2
16
28
D12.6
ICD-10 Finland
Benign neoplasm: Colon, unspecified
4.2
6.2
22
55
AAB10
NOMESCO Finland
Partial excision of intracranial lesion
7.9
6.2
13
17
N03AX09
ATC
lamotrigine; oral
3.3
6.1
29
93
EP1CG
NOMESCO Finland
Extensive MRI examination of soft tissue of neck with high intesity magnet
8.8
6.1
12
14
D18.0
ICD-10 Finland
Haemangioma, any site
5.7
6.1
16
29

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
39
33
12.93
39.07
4.7
3.4
2.1
7.5
nmol/l
0.58
39
33
40
39
11.23
36.55
3.7
1.3
—
—
—
0
0
35
36
10.52
30.73
3.4
1.4
—
—
nmol/l
—
0
0
225
1346
2.45
17.96
7.7
7.4
1.2
1.2
mmol/l
2.13
215
1235
79
282
3.22
17.52
6.4
10.5
5.0
5.2
kpa
0.64
73
270
100
409
2.90
17.48
6.8
8.2
1.0
1.1
mmol/l
1.12
94
387
79
283
3.21
17.41
6.4
10.6
0.0
1.0
mmol/l
0.91
59
225
78
282
3.17
16.90
6.5
10.5
14.9
12.9
kpa
1.55
73
271
231
1465
2.28
15.27
9.1
7.8
1.2
1.2
mmol/l
1.42
201
1261
72
263
3.10
15.26
1.5
1.5
—
—
—
0
0
92
390
2.74
14.84
1.6
1.2
—
—
—
0
0
180
1065
2.21
13.69
6.2
6.6
1.1
1.1
inr
0.47
60
327
203
1265
2.17
13.49
2.7
2.0
—
—
—
0
0
150
871
2.12
11.56
5.4
3.8
7.4
7.4
ph
0.14
36
152
66
286
2.55
9.99
7.1
10.5
—
—
—
0
0
182
1205
1.90
9.21
6.3
5.4
35.9
36.8
g/l
1.21
169
1132
112
629
2.06
9.13
2.3
2.6
6.3
6.7
e6/l
0.08
103
552
158
1005
1.92
8.99
2.9
2.4
—
—
—
0
0
53
220
2.61
8.73
4.8
4.9
111.7
69.5
ng/l
0.82
46
202
10
10
10.22
8.67
2.1
2.2
27.1
19.8
umol/l
—
10
10
140
868
1.92
8.52
3.3
3.1
1.1
0.4
e6/l
0.51
121
632
22
56
4.09
7.98
4.3
5.6
422.0
366.1
umol/l
0.76
22
51
38
139
2.91
7.94
5.8
14.8
—
—
—
0
0
21
52
4.20
7.89
1.9
1.5
—
—
—
0
0
148
955
1.85
7.84
3.3
3.2
25.7
109.1
e6/l
0.63
132
717
73
368
2.19
7.78
2.5
1.7
—
—
—
0
0
241
1814
1.77
7.49
6.4
5.1
6.2
6.5
mmol/l
2.80
236
1675
207
1496
1.76
7.38
4.6
4.0
—
—
—
0
0
135
867
1.82
7.15
3.3
3.0
—
—
—
0
0
66
332
2.17
7.05
10.5
7.2
105.4
104.1
mmol/l
1.25
66
324
39
158
2.62
6.74
4.0
7.9
—
—
—
0
0
165
1149
1.72
6.49
4.2
3.6
22.7
43.7
e6/l
1.44
140
768
61
308
2.15
6.44
4.5
6.3
1.2
1.7
mmol/l
0.54
46
243
212
1598
1.66
6.07
6.7
6.4
10.3
12.5
umol/l
2.09
196
1515
61
317
2.08
5.97
4.5
6.4
—
—
—
0
0
112
714
1.78
5.94
5.3
4.2
—
—
—
0
0
57
294
2.09
5.69
2.8
2.8
0.2
0.2
g/l
0.70
51
275
73
416
1.91
5.51
3.5
2.1
—
—
—
0
0
291
2431
1.64
5.12
8.2
6.9
80.0
79.9
u/l
0.02
275
2285
95
608
1.73
4.88
2.6
2.7
611.2
556.7
mosm/kgh2o
1.14
89
520
19
63
3.11
4.73
4.4
3.7
55.4
56.8
%
0.18
19
63
18
60
3.09
4.45
4.8
3.5
2.0
2.8
mmol/l
—
9
36
132
947
1.57
4.27
2.7
2.6
49.7
57.3
u/l
2.51
119
885
18
62
2.99
4.22
2.0
3.4
3.3
4.4
e9/l
1.49
18
62
14
41
3.50
4.22
2.7
7.8
—
—
—
0
0
134
968
1.56
4.20
3.4
3.2
2.4
2.4
mmol/l
0.05
123
858
116
824
1.56
3.87
3.7
3.6
0.0
0.0
estimate
0.80
40
300
257
2160
1.49
3.78
3.9
3.3
—
—
—
0
0
72
457
1.69
3.77
3.3
2.5
13.1
14.1
umol/l
0.53
67
426
24
104
2.39
3.66
6.4
4.9
—
—
—
0
0
18
69
2.68
3.52
4.9
3.3
7.4
7.4
ph
0.26
18
59
15
53
2.90
3.39
5.5
4.1
—
—
—
0
0
14
49
2.92
3.22
2.9
3.3
16.7
16.3
%
—
8
24
370
3414
1.70
3.16
20.9
13.2
139.3
139.7
mmol/l
2.23
361
3324
63
409
1.64
3.03
1.7
1.2
—
—
—
0
0
43
252
1.79
2.99
2.5
4.3
8.9
7.1
ug/l
0.13
32
204
58
371
1.65
2.96
1.7
1.5
—
—
—
0
0
11
35
3.20
2.95
1.5
3.3
—
—
—
0
0
9
22
4.16
2.89
2.3
2.2
13.5
20.2
ug/l
—
9
22
196
1619
1.39
2.86
3.5
3.2
0.0
0.0
estimate
0.00
37
299
42
248
1.77
2.85
3.7
7.1
7.4
7.4
ph
—
6
18
101
742
1.48
2.80
3.9
3.2
—
—
—
0
0
369
3424
1.64
2.80
21.0
13.3
4.0
3.9
mmol/l
0.21
360
3324
133
1030
1.43
2.80
3.3
3.2
20.4
30.5
ng/l
1.08
81
609
196
1624
1.39
2.78
4.7
4.5
0.0
0.0
estimate
0.50
42
308
5
6
8.41
2.75
2.4
1.0
—
—
—
0
0
60
395
1.61
2.74
3.7
2.5
25.4
24.0
%
0.26
50
350
7
194
0.35
2.61
1.0
1.1
—
—
—
0
0
63
425
1.57
2.60
3.5
2.5
2.2
2.4
g/l
1.97
57
400
98
727
1.45
2.58
1.9
2.3
1.1
1.0
mg/l
0.16
75
548
196
1645
1.36
2.49
3.5
3.3
0.0
0.0
estimate
0.00
43
288
12
275
0.42
2.40
1.5
1.4
—
—
—
0
0
256
2246
1.36
2.40
4.4
4.0
—
—
—
0
0
19
91
2.14
2.36
3.0
2.7
—
—
—
0
0
77
557
1.47
2.30
3.3
3.6
267.1
358.2
ng/l
0.14
49
378
142
1146
1.36
2.27
7.5
6.9
—
—
—
0
0
113
880
1.39
2.25
5.7
7.6
—
—
—
0
0
230
1999
1.33
2.23
9.6
9.5
4.4
4.0
e9/l
1.53
200
1741
185
1572
1.32
2.05
10.8
9.2
0.0
0.0
e9/l
0.84
151
1275
8
26
3.12
2.02
1.0
1.9
—
—
—
0
0
16
77
2.12
1.99
1.3
1.2
—
—
—
0
0
153
1273
1.32
1.95
3.6
3.1
—
—
—
0
0
103
1285
0.74
1.95
2.7
2.5
—
—
—
0
0
11
45
2.48
1.94
1.2
1.9
—
—
—
0
0
106
840
1.35
1.87
2.8
2.6
—
—
—
0
0
41
273
1.56
1.82
3.4
3.6
—
—
—
0
0
184
1584
1.29
1.78
6.3
6.7
0.7
0.7
%
0.05
173
1488
15
74
2.07
1.77
1.4
2.8
—
—
—
0
0
24
140
1.76
1.76
2.2
2.6
—
—
—
0
0
38
553
0.66
1.71
1.3
1.3
1.1
9.0
u/ml
3.40
14
223
94
742
1.34
1.70
2.6
2.2
3.2
3.0
mg/l
0.30
83
628
12
55
2.22
1.69
4.0
3.9
—
—
—
0
0
12
55
2.22
1.69
6.7
6.0
—
—
—
0
0
189
1642
1.27
1.68
7.0
6.9
9.0
8.4
%
1.43
179
1552
25
150
1.71
1.67
2.0
2.9
1.0
0.1
e6/l
0.64
25
144
72
548
1.38
1.64
1.8
1.6
412.7
447.8
pmol/l
0.72
56
467
194
1696
1.27
1.62
6.5
6.7
27.5
29.9
%
1.39
183
1602
7
26
2.72
1.58
1.0
1.0
—
—
—
0
0
10
44
2.30
1.54
1.8
3.8
—
—
—
0
0
203
1794
1.25
1.52
6.2
6.9
0.2
0.2
e9/l
0.27
175
1588
186
1630
1.25
1.49
6.6
6.7
2.7
2.9
%
0.33
176
1529
68
870
0.74
1.48
1.4
1.4
2.1
2.2
g/l
0.03
47
510
25
156
1.64
1.47
2.4
1.7
7.2
7.7
u/l
0.09
19
120
58
435
1.39
1.45
1.9
1.6
1086.9
1200.0
nmol/l
0.44
41
332
380
3643
1.45
1.45
11.3
9.3
23.7
27.6
u/l
4.39
366
3537
5
16
3.15
1.44
1.4
2.1
1686.0
2109.1
ml
—
5
16
196
1737
1.24
1.40
6.1
6.4
0.0
0.0
e9/l
0.65
167
1509
7
29
2.44
1.40
1.0
1.2
—
—
—
0
0
33
224
1.51
1.38
2.2
1.6
5.8
21.0
iu/l
11.20
24
185
6
23
2.63
1.37
1.0
2.8
—
—
—
0
0
5
17
2.96
1.36
1.6
2.9
22.0
26.6
umol/l
—
5
17
16
90
1.81
1.35
1.2
2.5
480.0
416.0
mg/l
0.43
16
85
194
1732
1.22
1.25
6.1
6.4
0.6
0.6
e9/l
2.54
166
1504
6
25
2.42
1.25
1.0
1.1
28.6
31.7
mg/l
—
6
20
8
37
2.18
1.22
2.0
3.1
—
—
—
0
0
5
19
2.65
1.22
2.0
3.7
0.4
1.9
ug/l
—
5
19
6
26
2.33
1.19
2.7
1.1
—
—
—
0
0
30
207
1.48
1.19
3.8
7.1
—
—
—
0
0
14
79
1.80
1.18
1.4
1.3
—
—
—
0
0
77
623
1.29
1.18
1.7
1.4
18.0
21.6
nmol/l
1.87
68
541
199
1791
1.21
1.16
6.1
6.4
1.9
2.0
e9/l
0.83
172
1586
5
20
2.52
1.15
1.6
1.2
26.5
16.7
umol/l
—
5
20
58
453
1.33
1.15
3.0
2.6
2.5
2.4
mmol/l
0.37
53
398
14
80
1.78
1.14
1.1
2.5
3.8
3.6
mmol/l
0.18
14
75
124
1074
1.22
1.05
2.0
1.8
96.1
97.6
pmol/l
0.12
72
551
5
22
2.29
1.03
1.0
1.2
—
—
—
0
0
7
35
2.02
1.00
3.6
3.1
—
19.4
—
0
7
35
259
1.38
0.99
3.3
4.4
1.0
0.8
%
—
8
74
378
3660
1.33
0.96
17.3
10.6
—
—
—
0
0
0
32
0.00
0.95
0.0
1.2
—
—
—
0
0
25
177
1.44
0.90
1.6
2.3
321.1
3079.6
u/l
—
7
71
5
101
0.49
0.90
1.2
1.6
—
—
—
0
0
184
1676
1.17
0.88
6.3
6.5
58.0
55.4
%
1.54
172
1587
361
3484
1.26
0.87
17.5
11.8
24.9
21.6
mg/l
1.00
298
2628
40
311
1.32
0.85
1.7
1.5
—
—
—
0
0
84
717
1.21
0.83
4.0
3.4
1.0
1.0
kg/l
0.72
13
101
31
233
1.36
0.82
3.0
3.5
59.3
70.7
e9/l
1.61
19
174
403
3953
1.48
0.82
26.0
17.3
261.7
256.1
e9/l
0.89
392
3857
37
471
0.76
0.81
1.2
1.3
—
—
—
0
0
0
25
0.00
0.79
0.0
1.1
—
—
—
0
0
5
99
0.50
0.78
1.0
1.5
—
—
—
0
0
403
3956
1.46
0.78
25.9
17.2
89.1
89.9
fl
2.85
398
3907
403
3956
1.46
0.78
25.9
17.2
29.8
30.1
pg
2.44
398
3906
0
27
0.00
0.77
0.0
2.6
—
—
—
0
0
90
779
1.20
0.77
2.9
3.3
—
—
—
0
0
42
522
0.78
0.77
1.8
2.6
65.8
102.7
ug/g
1.10
33
416
403
3957
1.46
0.76
26.0
17.2
4.6
4.6
e12/l
0.02
392
3852
85
734
1.20
0.75
2.9
3.0
333.1
4841.8
umol/l
2.37
75
654
50
409
1.25
0.74
2.7
3.4
5.8
7.8
umol/l
0.81
42
353
403
3959
1.44
0.73
26.1
17.3
7.1
6.7
e9/l
1.50
391
3855
403
3959
1.44
0.73
26.2
17.4
135.4
137.2
g/l
1.47
398
3907
99
870
1.18
0.72
1.6
1.7
1.3
1.4
mmol/l
0.32
93
752
46
560
0.80
0.71
1.3
1.6
—
—
—
0
0
348
3365
1.20
0.70
18.6
12.9
40.5
40.7
%
0.26
260
2696
29
373
0.76
0.70
1.8
1.8
—
—
—
0
0
12
77
1.57
0.69
8.3
3.6
3.7
3.9
mmol/l
1.22
12
69
7
42
1.68
0.68
2.1
5.2
—
—
—
0
0
48
578
0.81
0.68
1.3
1.3
14.0
34.9
iu/ml
3.29
16
183
13
87
1.51
0.64
2.2
2.7
—
—
—
0
0
276
2631
1.14
0.63
4.8
3.8
14.8
14.6
pmol/l
0.99
256
2419
165
1523
1.14
0.62
3.6
2.8
107.4
95.3
ug/l
0.35
153
1426
8
50
1.61
0.61
1.5
2.9
12.3
34.8
u/ml
—
8
50
0
20
0.00
0.60
0.0
1.1
—
—
—
0
0
84
948
0.86
0.60
1.4
1.4
1.3
2.1
u/ml
0.38
18
236
0
23
0.00
0.58
0.0
1.1
—
—
—
0
0
255
2426
1.13
0.58
3.7
3.9
11.5
9.7
mm/h
1.14
237
2250
323
3121
1.15
0.57
4.0
3.9
5.6
5.8
mmol/l
2.49
296
2894
59
507
1.19
0.57
2.0
1.6
—
—
—
0
0
8
55
1.46
0.56
1.5
1.4
—
—
—
0
0
6
38
1.59
0.54
2.0
1.2
—
—
—
0
0
30
241
1.26
0.54
3.5
4.6
0.2
0.2
%
—
5
64
301
2900
1.13
0.53
4.7
4.9
37.2
38.8
mmol/mol
2.43
278
2738
16
117
1.38
0.53
1.4
2.4
1.3
1.4
g/l
0.20
16
103
6
99
0.60
0.52
1.0
1.5
—
—
—
0
0
102
927
1.13
0.48
2.8
2.9
—
—
—
0
0
14
102
1.39
0.48
1.2
1.1
—
—
—
0
0
19
146
1.32
0.48
1.9
2.4
—
—
—
0
0
41
481
0.84
0.47
1.4
1.4
430.0
455.0
titre
—
8
101
7
48
1.47
0.47
1.1
1.5
—
—
—
0
0
7
49
1.44
0.46
1.6
1.9
—
—
—
0
0
7
49
1.44
0.46
1.6
1.9
—
—
—
0
0
7
49
1.44
0.46
1.6
1.9
—
—
—
0
0
7
49
1.44
0.46
1.6
1.9
—
—
—
0
0
303
3123
0.89
0.45
3.9
3.6
1.2
1.3
mmol/l
0.87
276
2928
33
277
1.21
0.42
1.7
3.0
10.2
9.9
g/l
0.13
33
253
11
79
1.40
0.41
1.2
1.1
—
—
—
0
0
28
232
1.22
0.41
3.9
4.6
0.8
0.2
%
—
5
58
0
17
0.00
0.40
0.0
5.3
—
—
—
0
0
0
18
0.00
0.40
0.0
1.2
—
—
—
0
0
0
18
0.00
0.40
0.0
1.1
—
—
—
0
0
5
35
1.43
0.39
5.4
2.8
—
—
—
0
0
0
19
0.00
0.39
0.0
1.5
—
—
—
0
0
0
19
0.00
0.39
0.0
1.2
—
—
—
0
0
9
67
1.35
0.38
1.7
4.6
35.3
37.5
umol/l
—
9
57
20
246
0.80
0.38
1.8
1.6
—
—
—
0
0
5
37
1.36
0.37
3.2
2.4
—
—
—
0
0
87
798
1.11
0.36
4.2
4.6
—
—
—
0
0
316
3235
0.91
0.35
4.2
3.9
1.4
1.5
mmol/l
0.09
291
3039
22
265
0.82
0.35
2.1
1.6
—
—
—
0
0
6
43
1.40
0.35
1.3
1.2
—
—
—
0
0
22
264
0.82
0.34
2.0
1.6
—
—
—
0
0
22
263
0.83
0.33
2.2
1.6
—
—
—
0
0
6
47
1.28
0.32
1.8
1.9
—
—
—
0
0
22
262
0.83
0.32
2.1
1.6
—
—
—
0
0
15
119
1.27
0.32
1.4
1.2
—
—
—
0
0
15
186
0.80
0.31
2.4
1.9
—
—
—
0
0
21
175
1.21
0.30
1.6
1.2
—
—
—
0
0
82
884
0.91
0.30
2.2
2.0
—
—
—
0
0
10
130
0.76
0.30
3.3
3.0
—
—
—
0
0
12
150
0.79
0.27
1.2
1.4
168.4
267.5
miu/ml
—
5
73
14
113
1.25
0.27
1.8
1.8
—
—
—
0
0
5
71
0.70
0.26
1.2
1.2
—
—
—
0
0
38
341
1.13
0.24
1.4
1.4
—
—
—
0
0
11
88
1.26
0.22
2.2
1.6
2.6
5.5
iu/l
—
6
27
5
41
1.22
0.22
11.8
3.8
1.0
1.0
%
—
5
34
0
11
0.00
0.21
0.0
1.9
—
—
—
0
0
0
10
0.00
0.21
0.0
6.0
—
—
—
0
0
0
10
0.00
0.21
0.0
2.2
—
4.1
—
0
10
0
10
0.00
0.21
0.0
2.2
—
2.4
—
0
10
0
12
0.00
0.21
0.0
1.2
—
—
—
0
0
46
500
0.91
0.21
1.5
1.7
—
—
—
0
0
0
13
0.00
0.21
0.0
1.8
—
—
—
0
0
25
221
1.14
0.20
1.5
1.4
—
—
—
0
0
323
3277
0.94
0.19
4.7
4.3
2.8
2.8
mmol/l
0.21
296
3070
6
51
1.18
0.19
1.0
1.1
—
—
—
0
0
320
3247
0.94
0.19
4.3
3.9
4.7
4.7
mmol/l
0.24
294
3066
105
1004
1.06
0.18
1.4
1.5
—
—
—
0
0
7
58
1.21
0.18
1.3
1.2
—
—
—
0
0
7
59
1.19
0.18
1.6
1.2
—
—
—
0
0
14
122
1.15
0.14
1.1
1.2
—
—
—
0
0
25
273
0.91
0.13
2.0
1.3
115.3
161.4
iu/ml
0.40
14
116
16
142
1.13
0.13
1.3
1.5
—
10.1
—
0
5
41
436
0.93
0.12
2.5
2.7
0.7
0.7
ug/l
0.02
28
262
10
85
1.18
0.12
1.3
1.3
—
—
—
0
0
77
742
1.05
0.11
4.4
4.3
2.2
1.8
ug/l
0.59
72
665
67
697
0.95
0.10
1.9
1.6
—
—
—
0
0
19
208
0.91
0.10
1.7
1.5
—
—
—
0
0
34
361
0.94
0.10
1.2
1.2
—
—
—
0
0
5
45
1.11
0.10
1.0
1.3
—
—
—
0
0
11
97
1.14
0.09
1.1
1.8
217.0
205.5
u/ml
—
5
58
6
58
1.03
0.08
1.0
1.0
—
—
—
0
0
94
964
0.97
0.08
3.1
3.2
8.1
8.1
mmol/l
0.04
89
838
6
71
0.84
0.07
2.7
3.8
—
—
—
0
0
79
768
1.04
0.07
3.3
3.2
1762.7
78.6
mg/l
0.99
63
501
316
3137
1.03
0.07
5.3
4.4
1.9
1.9
mu/l
0.10
294
2928
20
214
0.93
0.07
1.5
1.6
—
—
—
0
0
9
87
1.04
0.07
1.2
1.2
—
—
—
0
0
27
256
1.06
0.06
5.8
4.1
—
—
—
0
0
13
119
1.10
0.06
1.5
1.5
0.2
0.2
g/l
0.42
13
113
17
181
0.94
0.05
1.1
1.6
—
—
—
0
0
11
120
0.91
0.05
1.5
1.6
—
—
—
0
0
10
109
0.92
0.04
1.8
1.2
—
—
—
0
0
12
111
1.08
0.04
8.1
10.4
—
—
—
0
0
79
803
0.98
0.03
4.0
4.0
4.5
11.6
mg/mmol
2.62
63
516
13
122
1.07
0.02
1.1
1.7
—
—
—
0
0
13
123
1.06
0.01
1.5
1.5
1.0
1.2
g/l
1.82
13
115
24
234
1.03
0.00
3.6
3.1
—
—
—
0
0
36
366
0.98
0.00
1.4
1.4
—
—
—
0
0
20
201
0.99
0.00
1.2
1.2
—
—
—
0
0
22
225
0.98
0.00
1.6
1.7
3.0
1.2
g/l
0.44
22
208
16
164
0.97
0.00
1.1
1.1
—
—
—
0
0
19
186
1.02
0.00
2.4
2.1
—
—
—
0
0
0
6
0.00
0.00
0.0
2.7
—
109.7
—
0
6
0
6
0.00
0.00
0.0
1.5
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
0.00
0.0
1.3
—
—
—
0
0
5
59
0.85
0.00
1.0
1.1
—
—
—
0
0
0
6
0.00
0.00
0.0
2.3
—
—
—
0
0
5
54
0.93
0.00
1.4
1.0
1.6
1.3
g/l
—
5
49
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
6
63
0.95
0.00
1.0
1.8
—
—
—
0
0
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
12.8
—
—
—
0
0
0
8
0.00
0.00
0.0
1.3
—
57.5
—
0
8
0
5
0.00
0.00
0.0
1.0
—
18.6
—
0
5
6
63
0.95
0.00
1.8
1.4
1968.7
8899.0
e6/l
—
6
48
0
7
0.00
0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.1
—
68.7
—
0
9
0
9
0.00
0.00
0.0
8.1
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
0.00
0.0
2.0
—
—
—
0
0
5
49
1.02
0.00
2.0
2.5
—
—
—
0
0
0
7
0.00
0.00
0.0
1.7
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
9
99
0.91
0.00
1.4
1.8
—
—
—
0
0
0
9
0.00
0.00
0.0
1.6
—
—
—
0
0
0
5
0.00
0.00
0.0
2.0
—
—
—
0
0
6
59
1.02
0.00
1.8
1.6
—
—
—
0
0
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
20.4
—
0.5
—
0
7
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint Q17_PHAKOMATOSES_NOT_ELSEW_CLASSIFIED and mortality.

Females

Parameter HR [95% CI] p-value
Q17_PHAKOMATOSES_NOT_ELSEW_CLASSIFIED 2.597 [2.1, 3.21] < 0.001
Birth year 0.996 [0.99, 1.01] 0.496

During the follow-up period (1.1.1998 — 31.12.2019), 166 out of 1530 females with Q17_PHAKOMATOSES_NOT_ELSEW_CLASSIFIED died.

Males

Parameter HR [95% CI] p-value
Q17_PHAKOMATOSES_NOT_ELSEW_CLASSIFIED 2.467 [1.98, 3.07] < 0.001
Birth year 0.987 [0.98, 1.0] 0.006

During the follow-up period (1.1.1998 — 31.12.2019), 195 out of 1477 males with Q17_PHAKOMATOSES_NOT_ELSEW_CLASSIFIED died.

Mortality risk

Mortality risk for people of age

years, who have Q17_PHAKOMATOSES_NOT_ELSEW_CLASSIFIED.

N-year risk Females Males
1 0.235% 0.449%
5 1.518% 2.752%
10 3.83% 7.147%
15 7.45% 12.817%
20 13.17% 20.695%

Relationships between endpoints

Index endpoint: Q17_PHAKOMATOSES_NOT_ELSEW_CLASSIFIED – Phakomatoses, not elsewhere classified

GWS hits: 3

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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