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Melanoma in situ of upper limb, including shoulder

CD2_INSITU_MELANOMA_UPPERLIMB

melanoma: A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.

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Endpoint definition

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 D03.6&
  • Cause of death: ICD-10 D03.6&

2 out of 7 registries used, show all original rules.

223

4. Check minimum number of events

None

223

5. Include endpoints

None

223

6. Filter based on genotype QC (FinnGen only)

223

Control definitions (FinnGen only)

Controls for this endpoint are individuals that are not cases.

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF2
Parent code in ICD-10
D03
Name in latin
Melanoma in situ regionis deltoideae

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

-FinnGen-

Key figures

All Female Male
Number of individuals 223 131 92
Unadjusted period prevalence (%) 0.04 0.04 0.04
Median age at first event (years) 68.34 66.98 70.27

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

Not a core endpoint, no data to show.

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
191
Matched controls
1908
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
D03.6
ICD-10 Finland
Melanoma in situ of upper limb, including shoulder
+∞
273.1
190
*
QCE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in upper limb
184.8
133.0
129
21
8720/2-C44.9
ICD-O-3
Melanoma in situ of skin, NOS
595.2
48.6
46
*
QBE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin of trunk
14.1
36.9
67
70
D22.6
ICD-10 Finland
Melanocytic naevi of upper limb, including shoulder
46.9
34.1
41
11
D22.9
ICD-10 Finland
Melanocytic naevi, unspecified
27.1
33.3
46
22
TQX10
NOMESCO Finland
Biopsy of skin and subcutaneous tissue
9.9
32.7
73
112
D22.5
ICD-10 Finland
Melanocytic naevi of trunk
17.0
31.2
51
40
L57.0
ICD-10 Finland
Actinic keratosis
6.9
24.2
69
145
QAE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in head or neck
7.4
20.6
53
94
D48.5
ICD-10 Finland
Neoplasm of uncertain or unknown behaviour: Skin
9.0
20.3
45
63
C43.62
ICD-10 Finland
Malignant melanoma of upper extremity including shoulder: 'superficial spreading' type
86.9
14.8
16
*
TQW99
NOMESCO Finland
Other minor procedure on skin
6.9
14.4
37
64
QDE10
NOMESCO Finland
Excision of other lesion extending through all layers of skin in lower limb
12.9
14.3
25
22
R23.8
ICD-10 Finland
Other and unspecified skin changes
4.3
14.0
59
180
ZZR00
NOMESCO Finland
Flap of skin
11.8
13.7
25
24
C44.31
ICD-10 Finland
Basocellular carcinoma of the skin on another or unspecified part of the face
5.9
13.3
39
80
D22.7
ICD-10 Finland
Melanocytic naevi of lower limb, including hip
20.9
13.2
19
10
XQ846
NOMESCO Finland
Digital dermatoscopy and registration of nevi
+∞
12.6
12
*
S18
ICPC
Laceration/cut
3.0
11.8
113
626
QXA25
NOMESCO Finland
Destruction of lesion of skin, site unspecified
11.1
11.3
21
21
8720/3-C44.9
ICD-O-3
Malignant melanoma, NOS, of skin, NOS
26.9
11.3
15
6
SPAT1153
SPAT
Removal of sutures
2.9
11.0
89
436
S82
ICPC
Naevus/mole
3.9
10.7
47
146
C43.6
ICD-10 Finland
Malignant neoplasm: Malignant melanoma of upper limb, including shoulder
116.0
10.5
11
*
8720/3-C44.6
ICD-O-3
Malignant melanoma, NOS, of skin of upper limb and shoulder
34.6
10.5
13
*
D03.5
ICD-10 Finland
Melanoma in situ of trunk
34.6
10.5
13
*
L82
ICD-10 Finland
Seborrhoeic keratosis
3.5
10.1
51
178
C43.60
ICD-10 Finland
Malignant melanoma of the upper extremity including the shoulder without histology
58.0
9.7
11
*
QAA25
NOMESCO Finland
Destruction of lesion of head or neck
9.7
8.7
17
19
D04.6
ICD-10 Finland
Carcinoma in situ: Skin of upper limb, including shoulder
17.3
8.7
13
8
C43.69
ICD-10 Finland
Malignant melanoma of the upper extremity including shoulder other or unspecified histology
93.9
8.5
9
*
C43
ICD-10 Finland
Malignant melanoma of skin
93.9
8.5
9
*
D06BB10
ATC
imiquimod; topical
5.9
8.5
23
43
S77
ICPC
Malignant neoplasm of skin
11.5
8.5
15
14
8720/2-C44.6
ICD-O-3
Melanoma in situ of skin of upper limb and shoulder
+∞
8.4
8
*
C43.52
ICD-10 Finland
Malignant melanoma on the torso: 'superficial spreading' type
23.2
8.1
11
5
ZXC50
NOMESCO Finland
Cryotherapy
6.3
7.4
19
33
C43.59
ICD-10 Finland
Malignant melanoma of the trunk other or unspecified histology
31.3
7.2
9
*
8743/3-C44.9
ICD-O-3
Low cumulative sun damage melanoma of skin, NOS
41.5
6.8
8
*
D04.3
ICD-10 Finland
Carcinoma in situ: Skin of other and unspecified parts of face
6.9
6.8
16
25
XQ845
NOMESCO Finland
Dermatoscopy
15.0
6.5
10
7
C43.72
ICD-10 Finland
Malignant melanoma of the lower extremity including the hip: 'superficial spreading' type
72.1
6.5
7
*
QAE20
NOMESCO Finland
Excision and repair of scar or web of skin of head or neck
+∞
6.3
6
*
C44.32
ICD-10 Finland
Spinocellular carcinoma of the skin on another or unspecified part of the face
9.0
6.1
12
14

Mortality – FinRegistry

This endpoint is excluded from FinRegistry analyses (omitted endpoint).

Relationships between endpoints

Index endpoint: CD2_INSITU_MELANOMA_UPPERLIMB – Melanoma in situ of upper limb, including shoulder

GWS hits: -

This endpoint is excluded from FinRegistry analyses (omitted endpoint).