No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
519972 |
1. Apply sex-specific ruleNone |
519972 |
2. Check conditionsNone |
519972 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
3 out of 7 registries used, show all original rules. |
173 |
4. Check minimum number of eventsNone |
173 |
5. Include endpointsNone |
173 |
6. Filter based on genotype QC (FinnGen only) |
169 |
Control definitions (FinnGen only)
Controls for this endpoint are individuals that are not cases.
Extra metadata
- First used in FinnGen datafreeze
- DF12
Similar endpoints
↥List of similar endpoints to
Vaginal lichen planus
based on the number of shared cases.
Similar with more cases:
- Vulvovaginal ulceration/inflammation in other diseases
- Lichen planus
- Lichen planus, including avohilmo
- Lichen ruber planus, wide definition including periferal and oral lichen planus
- Papulosquamous disorders
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 169 | 169 | - |
| Unadjusted period prevalence (%) | 0.06 | 0.06 | - |
| Median age at first event (years) | 66.21 | 66.21 | - |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
No data
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 173
- Matched controls
- 1730
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
N77.8*L43.9
ICD-10 Finland
Vulvovaginal ulceration and inflammation caused by lichen ruber planus
+∞
247.0
172
*
L43.9
ICD-10 Finland
Lichen planus, unspecified
86.2
160.6
91
22
LFB00
NOMESCO Finland
Biopsy of vulva or perineum
52.2
139.7
91
36
D07AD01
ATC
clobetasol; topical
53.1
125.6
153
218
ULA02
NOMESCO Finland
Kolposcopy
32.4
125.5
121
116
L43.8
ICD-10 Finland
Other lichen planus
60.7
102.7
60
15
LEB00
NOMESCO Finland
Biopsy of vagina
34.0
81.1
56
24
K13.74
ICD-10 Finland
Lichen rubs planus in the mouth
35.0
76.7
52
21
XLD00
NOMESCO Finland
Sytologyspecimen from mouth of uterus
9.0
46.6
85
168
L90.0
ICD-10 Finland
Lichen sclerosus et atrophicus
14.3
42.4
43
39
L43
ICD-10 Finland
Lichen planus
58.0
21.8
25
5
G01AA10
ATC
clindamycin; vaginal
4.3
19.1
70
234
EKA10
NOMESCO Finland
iopsy of buccal mucosa
9.0
18.8
25
32
LC2BE
NOMESCO Finland
Transvaginal ultrasound examination of uterus, parametria and lower abdomen
4.0
18.1
101
450
D07AC01
ATC
betamethasone; topical
4.0
18.1
106
488
N77.8
ICD-10 Finland
Vulvovaginal ulceration and inflammation in other diseases classified elsewhere
199.6
17.9
18
*
J02AC01
ATC
fluconazole; systemic
4.5
17.6
131
706
WX105
NOMESCO Finland
Surface analgesia on skin or mucosa
5.2
16.3
39
92
N76.3
ICD-10 Finland
Subacute and chronic vulvitis
21.5
14.6
21
11
N89.5
ICD-10 Finland
Stricture and atresia of vagina
+∞
13.7
13
*
A07EA02
ATC
hydrocortisone; rectal
24.9
13.2
18
8
L43.0
ICD-10 Finland
Hypertrophic lichen planus
32.6
11.9
15
5
SBA00
NOMESCO Finland
Microbiological examinations
13.1
11.7
20
17
G03CA03
ATC
estradiol; nasal, systemic, rectal, transdermal, vaginal
6.2
11.5
160
1148
L43.3
ICD-10 Finland
Subacute (active) lichen planus
46.6
11.1
13
*
SBB00
NOMESCO Finland
Clinical photography of mouth and teeth
8.7
10.8
23
30
ECA20
NOMESCO Finland
Biopsy of gingiva
27.9
10.0
13
5
D05BB02
ATC
acitretin; oral
14.5
9.9
16
12
N90.8
ICD-10 Finland
Other specified noninflammatory disorders of vulva and perineum
18.9
9.6
14
8
N95.0
ICD-10 Finland
Postmenopausal bleeding
3.3
9.5
43
158
LX1AE
NOMESCO Finland
Gynecological ultrasound examination as part of clinical examination
3.4
9.5
39
135
D07AB02
ATC
hydrocortisone butyrate; topical
2.7
9.1
79
414
N76.8
ICD-10 Finland
Other specified inflammation of vagina and vulva
13.5
9.1
15
12
Z70.8
ICD-10 Finland
Other sex counselling
52.7
8.8
10
*
E0000UV, ,
ATC
2.6
8.6
99
589
LDA20
NOMESCO Finland
Biopsy of vaginal cervix
4.1
8.5
25
68
TQX10
NOMESCO Finland
Biopsy of skin and subcutaneous tissue
3.5
8.5
32
104
N76.0
ICD-10 Finland
Acute vaginitis
4.2
8.1
23
61
LCA06
NOMESCO Finland
Biopsy of endometrium
2.8
8.0
49
212
K13.78
ICD-10 Finland
Other change in the oral mucosa
9.2
8.0
16
19
R87.6
ICD-10 Finland
Abnormal findings in specimens from female genital organs, abnormal cytological findings
3.3
7.8
33
115
D07AC13
ATC
mometasone; topical
2.5
7.6
70
370
TLE00
NOMESCO Finland
Dilatation of vagina
+∞
7.3
7
*
N90.9
ICD-10 Finland
Noninflammatory disorder of vulva and perineum, unspecified
21.1
7.2
10
5
A07AA02
ATC
nystatin; oral
3.7
6.7
22
65
SAA03
NOMESCO Finland
Extended examination of mouth
2.3
6.7
86
521
E000006, ,
ATC
3.3
6.3
26
89
N94.1
ICD-10 Finland
Dyspareunia
13.2
6.2
10
8
D01AC20
ATC
imidazoles/triazoles in combination with corticosteroids; topical
2.4
6.1
56
292
S01XA20
ATC
artificial tears and other indifferent preparations; ophthalmic
2.2
6.0
106
720
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
83
373
3.36
13.76
1.9
1.4
—
—
—
0
0
24
22
12.47
13.52
2.9
1.5
—
—
—
0
0
29
76
4.38
10.44
1.6
1.4
—
—
—
0
0
16
39
4.42
6.24
1.3
1.3
—
—
—
0
0
56
318
2.13
4.80
1.2
1.3
17.98
34.50
iu/ml
1.18
18
105
62
373
2.03
4.51
1.4
1.2
0.75
1.58
u/ml
0.70
14
102
12
30
4.22
3.67
1.3
1.3
—
—
—
0
0
151
1285
2.38
3.66
4.8
4.4
14.46
14.83
pmol/l
1.12
144
1161
38
208
2.06
3.49
2.5
3.0
2.75
3.80
e6/l
0.46
18
103
141
1183
2.04
3.32
4.1
4.3
10.76
12.46
mm/h
1.21
134
1071
40
231
1.95
3.16
2.4
2.7
0.87
1.00
e6/l
0.15
21
123
86
634
1.71
3.01
2.0
2.0
95.92
103.49
pmol/l
0.87
44
280
100
776
1.68
2.83
5.6
3.7
0.00
0.02
estimate
0.50
16
142
71
504
1.69
2.81
2.1
2.2
51.33
58.19
u/l
1.66
64
457
5
6
8.53
2.76
2.8
1.0
9.10
10.53
ug/l
—
5
6
73
524
1.68
2.76
3.0
2.9
—
—
—
0
0
7
14
5.16
2.75
1.0
1.3
—
—
—
0
0
168
1563
3.59
2.72
5.8
5.3
2.80
2.84
mmol/l
0.26
156
1427
99
772
1.66
2.70
7.5
4.9
0.00
0.00
estimate
-0.00
15
145
112
902
1.69
2.69
7.0
9.0
3.88
3.82
e9/l
0.11
101
792
110
882
1.68
2.69
2.5
2.8
—
—
—
0
0
98
763
1.66
2.68
5.6
3.7
0.00
0.00
estimate
-0.00
16
155
44
283
1.74
2.44
1.5
1.8
1250.18
1225.21
nmol/l
0.06
33
203
164
1523
2.48
2.27
4.9
4.6
1.60
1.64
mmol/l
0.52
155
1388
57
407
1.60
2.11
2.7
3.0
0.16
0.47
e6/l
1.54
39
302
164
1534
2.33
2.00
5.4
4.7
4.85
4.89
mmol/l
0.25
154
1409
161
1487
2.19
1.91
6.1
5.3
1.97
1.89
mu/l
0.17
155
1348
47
328
1.59
1.89
1.3
1.3
20.31
11.60
u/ml
0.19
16
132
88
707
1.50
1.86
2.4
2.4
78.44
81.11
nmol/l
0.49
82
621
7
24
2.99
1.74
2.9
1.5
—
—
—
0
0
5
13
3.93
1.72
1.2
1.1
—
—
—
0
0
158
1459
1.96
1.72
6.2
5.8
38.85
39.48
mmol/mol
0.57
151
1342
163
1522
2.23
1.71
13.3
13.2
19.93
19.64
mg/l
0.04
131
1163
65
498
1.49
1.70
2.8
2.9
29.32
28.18
u/l
0.17
60
473
45
321
1.54
1.64
1.6
1.7
176923501.59
484.16
pmol/l
0.49
39
257
23
138
1.77
1.62
1.9
3.2
15.26
35.91
u/ml
1.27
23
132
59
452
1.46
1.52
1.8
1.7
1.23
1.35
mmol/l
0.87
48
369
162
1521
2.02
1.47
5.1
4.8
5.82
5.87
mmol/l
0.28
154
1382
48
356
1.48
1.45
2.4
2.2
2.44
3.32
mg/l
2.19
37
306
42
303
1.51
1.44
3.0
2.8
2.45
2.46
mmol/l
0.22
37
270
50
380
1.44
1.33
1.6
2.5
305.24
9205.77
umol/l
2.74
41
322
15
85
1.84
1.27
1.5
1.4
—
—
—
0
0
46
347
1.44
1.27
1.7
1.8
0.77
0.90
mg/l
0.35
35
271
93
806
1.33
1.07
4.8
6.0
1.22
1.23
mmol/l
0.86
86
678
15
92
1.69
1.01
1.5
1.6
—
—
—
0
0
0
30
0.00
0.98
0.0
1.3
—
—
—
0
0
7
36
1.98
0.98
1.1
1.5
—
—
—
0
0
14
85
1.70
0.97
1.5
1.4
—
—
—
0
0
52
421
1.34
0.93
5.9
4.1
0.00
0.00
estimate
-0.00
16
147
109
980
1.30
0.90
2.8
2.9
33.81
45.28
u/l
2.64
100
897
36
277
1.38
0.89
1.6
1.4
—
—
—
0
0
97
860
1.29
0.89
4.3
5.8
11.21
9.95
umol/l
0.60
92
808
20
137
1.52
0.89
1.7
2.4
65.81
64.38
ml/min/173m2
—
8
48
70
595
1.30
0.88
6.1
3.8
—
—
—
0
0
16
105
1.58
0.85
1.4
1.4
—
50.88
—
0
6
13
83
1.61
0.77
1.1
1.0
—
—
—
0
0
36
284
1.34
0.76
2.8
3.8
12.43
110.29
ng/l
1.45
23
218
22
160
1.43
0.75
3.2
5.7
105.82
103.99
mmol/l
1.00
22
160
5
26
1.95
0.71
1.2
1.3
—
—
—
0
0
17
119
1.48
0.70
3.2
2.6
—
15.53
—
0
6
20
145
1.43
0.69
2.8
3.3
—
—
—
0
0
66
576
1.24
0.64
3.4
3.4
11.93
20.86
ng/l
3.94
36
406
11
71
1.59
0.64
3.5
2.3
0.12
0.22
e6/l
0.29
11
66
29
361
0.76
0.62
1.8
2.1
—
—
—
0
0
0
20
0.00
0.61
0.0
1.8
—
16.80
—
0
5
8
52
1.56
0.60
1.0
1.3
—
1.16
—
0
5
152
1459
1.34
0.58
4.6
4.2
1.34
1.24
mmol/l
0.99
143
1322
6
37
1.64
0.56
1.3
1.1
224.50
88.12
e6/l
—
6
32
9
60
1.53
0.55
1.2
1.1
—
—
—
0
0
9
61
1.50
0.55
1.2
1.1
—
—
—
0
0
6
39
1.56
0.53
1.0
1.2
—
—
—
0
0
9
63
1.45
0.53
4.4
2.9
45.09
45.71
%
—
9
63
15
109
1.41
0.53
1.1
1.4
—
—
—
0
0
28
226
1.29
0.52
1.7
1.9
—
—
—
0
0
15
199
0.73
0.50
2.9
4.0
2.57
7.85
ug/l
—
10
164
11
77
1.46
0.47
2.3
5.9
25.56
25.69
mmol/l
0.04
11
77
77
703
1.17
0.44
2.2
2.4
—
—
—
0
0
0
15
0.00
0.41
0.0
1.3
—
—
—
0
0
0
16
0.00
0.41
0.0
1.2
—
—
—
0
0
0
16
0.00
0.41
0.0
3.5
—
—
—
0
0
0
16
0.00
0.41
0.0
1.3
—
94.40
—
0
5
8
60
1.35
0.41
5.0
3.6
20.25
29.20
u/ml
—
8
60
5
35
1.44
0.39
1.4
1.9
—
—
—
0
0
9
69
1.32
0.38
3.0
2.2
41.67
39.98
u/l
—
9
63
17
209
0.79
0.34
6.9
6.0
—
—
—
0
0
54
491
1.15
0.31
3.6
3.5
10.44
5.13
mg/mmol
0.26
31
254
7
55
1.28
0.30
1.1
1.6
—
—
—
0
0
7
56
1.26
0.30
2.9
1.9
—
—
—
0
0
15
121
1.26
0.29
1.2
1.2
119.25
152.29
iu/ml
—
8
52
13
103
1.28
0.29
3.0
2.3
4.19
4.27
kpa
0.06
13
103
19
159
1.22
0.28
1.4
1.8
—
—
—
0
0
8
67
1.20
0.26
2.3
2.1
1.14
1.14
%
—
8
67
5
40
1.26
0.22
1.4
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.4
—
—
—
0
0
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
0
10
0.00
0.21
0.0
1.2
—
—
—
0
0
0
10
0.00
0.21
0.0
1.4
—
—
—
0
0
0
10
0.00
0.21
0.0
1.2
—
226.43
—
0
10
5
43
1.17
0.21
1.0
1.2
—
—
—
0
0
0
13
0.00
0.21
0.0
1.8
—
—
—
0
0
149
1460
1.15
0.21
13.1
12.6
80.60
78.51
ml/min/173m2
0.77
129
1203
0
14
0.00
0.20
0.0
1.6
—
—
—
0
0
0
14
0.00
0.20
0.0
1.6
—
—
—
0
0
0
14
0.00
0.20
0.0
2.1
—
—
—
0
0
0
14
0.00
0.20
0.0
1.6
—
—
—
0
0
0
14
0.00
0.20
0.0
1.3
—
—
—
0
0
6
49
1.23
0.20
1.0
1.4
—
3.91
—
0
14
18
157
1.16
0.18
1.4
1.8
—
—
—
0
0
7
61
1.15
0.18
2.9
1.9
—
—
—
0
0
5
65
0.76
0.17
1.2
1.6
—
—
—
0
0
12
141
0.84
0.17
3.4
5.5
235.58
238.70
u/l
0.06
12
135
8
68
1.18
0.17
5.8
2.4
25.88
25.51
mmol/l
—
8
68
23
207
1.13
0.16
2.3
2.2
20.24
21.93
%
0.30
17
175
14
121
1.17
0.15
4.3
2.8
6.26
5.99
kpa
0.60
14
121
72
690
1.07
0.14
14.6
10.5
1.01
1.17
inr
2.87
31
209
5
48
1.04
0.09
1.2
1.3
—
—
—
0
0
6
58
1.04
0.08
2.2
3.2
26.28
25.00
mmol/l
—
6
58
7
67
1.05
0.08
1.0
2.4
—
—
—
0
0
8
77
1.04
0.07
2.3
7.8
1.36
1.35
%
—
8
77
8
77
1.04
0.07
2.3
7.8
0.64
0.71
%
—
8
77
9
85
1.06
0.07
2.3
3.3
4.24
4.43
pmol/l
—
9
73
13
119
1.10
0.06
4.5
2.8
2.61
2.71
mmol/l
0.05
13
104
12
121
0.99
0.00
1.8
1.7
—
—
—
0
0
17
169
1.01
0.00
7.5
4.2
1.01
1.05
mmol/l
0.38
17
154
44
436
1.01
0.00
2.2
3.0
585.79
892.19
ng/l
0.85
36
373
0
8
0.00
0.00
0.0
2.6
—
—
—
0
0
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
0
8
0.00
0.00
0.0
2.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
0
8
0.00
0.00
0.0
2.0
—
—
—
0
0
0
8
0.00
0.00
0.0
2.3
—
62.05
—
0
8
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
(3016894) Varicella zoster virus DNA [Presence] in Cerebral spinal fluid by NAA with probe detection
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
6
65
0.92
-0.00
1.0
2.4
10.58
9.75
g/l
—
6
60
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
17.67
—
0
6
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
5
54
0.92
-0.00
1.2
5.1
19.82
24.08
mg/l
—
5
44
0
5
0.00
-0.00
0.0
1.4
—
—
—
0
0
5
59
0.84
-0.00
1.0
2.9
0.00
0.88
g/l
—
5
53
0
9
0.00
-0.00
0.0
1.3
—
27.83
—
0
9
0
9
0.00
-0.00
0.0
4.9
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
—
—
0
0
5
53
0.94
-0.00
1.2
5.2
—
3.59
—
0
6
5
54
0.92
-0.00
1.2
5.1
36.00
37.66
mg/l
—
5
45
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: VAGINAL_LICHEN_PLANUS – Vaginal lichen planus
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).