No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
519972 |
1. Apply sex-specific ruleNone |
519972 |
2. Check conditionsNone |
519972 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
3 out of 7 registries used, show all original rules. |
162 |
4. Check minimum number of eventsNone |
162 |
5. Include endpointsNone |
162 |
6. Filter based on genotype QC (FinnGen only) |
150 |
Control definitions (FinnGen only)
- Control exclude
- AB1_OTHER_BACTERIAL
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF13
Similar endpoints
↥List of similar endpoints to
Actinomycosis
based on the number of shared cases.
Similar with more cases:
- Other bacterial diseases
- Certain infectious and parasitic diseases
- Any operation in hilmo
- Any event in hilmo or specialist outpatient
- Any prescribed medicine buy
Similar with less cases:
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 150 | 79 | 71 |
| Unadjusted period prevalence (%) | 0.03 | 0.03 | 0.03 |
| Median age at first event (years) | 56.33 | 52.62 | 60.45 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
No data
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 162
- Matched controls
- 1620
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
A42.8
ICD-10 Finland
Other forms of actinomycosis
+∞
42.6
39
*
A42.9
ICD-10 Finland
Actinomycosis, unspecified
+∞
32.4
30
*
A42.0
ICD-10 Finland
Pulmonary actinomycosis
+∞
30.1
28
*
A49.9
ICD-10 Finland
Bacterial infection, unspecified
55.1
30.1
35
8
A42.2
ICD-10 Finland
Cervicofacial actinomycosis
+∞
21.3
20
*
A41.9
ICD-10 Finland
Sepsis, unspecified
+∞
14.8
14
*
UGC12
NOMESCO Finland
Flexible bronchoscopy
6.3
14.6
27
50
A41.5
ICD-10 Finland
Sepsis due to other Gram-negative organisms
+∞
13.7
13
*
R91
ICD-10 Finland
Abnormal findings on diagnostic imaging of lung
5.1
13.6
32
74
A42.7
ICD-10 Finland
Actinomycotic sepsis
+∞
11.6
11
*
A41.0
ICD-10 Finland
Sepsis due to Staphylococcus aureus
+∞
10.5
10
*
JN4BD
NOMESCO Finland
Extensive body CT
4.5
10.1
27
69
A46
ICD-10 Finland
Erysipelas
5.8
9.9
19
36
J18.9
ICD-10 Finland
Pneumonia, unspecified
3.1
9.8
55
231
JN1AE
NOMESCO Finland
Ultrasound examination of upper part of abdomen
4.9
9.7
23
53
GD1QA
NOMESCO Finland
Supine thorax X-ray examination
3.6
9.5
37
124
A42
ICD-10 Finland
Actinomycosis
+∞
8.4
8
*
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
3.9
8.2
27
80
GD1AA
NOMESCO Finland
Thorax X-ray examination
2.5
7.8
79
442
K05.31
ICD-10 Finland
Periodontitis pronounced
3.6
7.5
27
85
11399
ICD-8 Finland
Actinomycosis
+∞
7.3
7
*
XLD00
NOMESCO Finland
Sytologyspecimen from mouth of uterus
3.7
7.3
25
76
N02AA05
ATC
oxycodone; systemic
3.0
7.2
36
139
A06AD11
ATC
lactulose; oral
3.2
7.0
31
112
TGC00
NOMESCO Finland
Bronchial lavation
11.7
6.9
12
11
EB1HA
NOMESCO Finland
Panorama tomography of teeth and jaws or similar X-ray examination
2.4
6.8
73
412
R50.9
ICD-10 Finland
Fever, unspecified
3.3
6.8
28
96
J01MA12
ATC
levofloxacin; systemic
2.9
6.8
36
144
NF1AA
NOMESCO Finland
Hip X-ray examination
4.0
6.7
20
55
QDB10
NOMESCO Finland
Major dressing of wound of skin of lower limb
9.3
6.7
13
15
C03CA01
ATC
furosemide; systemic
2.5
6.7
57
290
WZC10
NOMESCO Finland
Written specialist consultation based on a referral from a dentist or a physician
6.2
6.7
17
30
M04AA01
ATC
allopurinol; systemic
3.3
6.6
27
92
GD1AD
NOMESCO Finland
Thorax CT examination
6.5
6.5
16
27
A42.1
ICD-10 Finland
Abdominal actinomycosis
+∞
6.3
6
*
TLC02
NOMESCO Finland
Simple extraction of IUD
7.7
6.1
13
18
R2110
NOMESCO Finland
Giving the first information
4.3
6.1
16
40
SPAT1305
SPAT
Counselling and guidance related to physical exercise
3.5
6.0
22
70
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
29
24
14.45
17.17
3.0
1.8
—
—
—
0
0
24
47
5.82
12.16
7.6
1.9
2.64
1.84
mmol/l
0.35
19
38
42
146
3.53
10.23
2.5
1.7
—
—
—
0
0
89
491
2.80
9.50
7.8
3.3
33.01
36.25
g/l
3.74
83
455
17
19
9.85
8.78
1.9
1.2
—
—
—
0
0
25
67
4.23
8.73
2.2
1.3
—
—
—
0
0
16
20
8.75
7.81
1.9
1.3
—
—
—
0
0
106
685
2.58
7.60
16.8
7.9
4.11
3.91
e9/l
0.50
95
609
16
21
8.32
7.60
1.8
1.2
—
—
—
0
0
14
15
10.09
7.45
1.9
1.2
—
—
—
0
0
30
105
3.28
7.09
1.5
1.6
—
—
—
0
0
40
166
2.87
7.06
5.7
2.5
0.80
0.82
mmol/l
0.41
40
154
12
11
11.67
6.92
1.3
1.0
—
—
—
0
0
13
16
8.72
6.47
1.5
1.4
—
—
—
0
0
29
107
3.08
6.26
1.5
1.7
—
—
—
0
0
86
538
2.28
6.17
12.9
5.2
1.22
1.22
mmol/l
0.17
73
459
11
12
9.74
5.89
1.9
1.4
—
—
—
0
0
11
12
9.74
5.89
1.2
1.2
—
—
—
0
0
11
12
9.74
5.89
1.9
1.4
—
—
—
0
0
94
619
2.24
5.85
12.4
5.1
10.82
10.70
umol/l
0.04
88
574
10
10
10.56
5.61
1.9
1.5
—
—
—
0
0
11
14
8.34
5.44
1.2
1.2
—
—
—
0
0
124
933
2.40
5.37
15.8
6.1
92.62
75.88
u/l
0.76
115
856
9
8
11.82
5.36
2.1
1.4
—
—
—
0
0
9
8
11.82
5.36
2.1
1.4
—
—
—
0
0
9
8
11.82
5.36
2.1
1.4
—
—
—
0
0
9
9
10.50
5.09
2.0
1.6
—
—
—
0
0
9
9
10.50
5.09
1.2
1.1
—
—
—
0
0
9
11
8.58
4.62
1.2
1.3
—
—
—
0
0
69
436
2.01
4.44
5.7
3.5
32.74
57.44
ng/l
1.01
52
310
81
543
1.98
4.40
12.9
12.5
1.32
1.28
inr
0.08
20
151
60
363
2.04
4.34
3.8
3.0
48.70
29.16
u/l
0.81
60
346
8
9
9.27
4.33
1.4
1.0
—
—
—
0
0
(3020427) Coagulation factor X inhibitor [Units/volume] in Platelet poor plasma by Coagulation assay
12
25
5.10
4.28
1.6
1.6
0.25
0.31
u/ml
—
7
11
27
121
2.48
4.01
10.5
6.4
104.00
103.74
mmol/l
0.13
27
121
13
32
4.32
4.00
1.2
1.0
—
—
—
0
0
15
49
3.27
3.92
1.5
2.4
—
—
—
0
0
48
277
2.04
3.89
3.7
1.9
—
—
—
0
0
55
334
1.98
3.87
4.6
3.2
1055.06
1115.58
ng/l
0.10
49
274
13
34
4.06
3.79
4.1
1.8
—
—
—
0
0
117
921
1.97
3.66
6.4
3.6
18.47
10.46
mm/h
4.01
111
841
22
95
2.52
3.52
3.4
1.8
479.86
378.85
nmol/l
0.83
22
88
67
449
1.84
3.43
2.0
1.9
91.32
96.66
pmol/l
0.46
35
229
9
19
4.95
3.29
2.7
1.4
—
—
—
0
0
12
34
3.73
3.27
3.1
1.7
—
—
—
0
0
7
11
6.59
3.22
1.6
1.2
—
—
—
0
0
13
44
3.13
3.21
1.2
2.1
37.38
41.84
u/l
0.31
13
37
14
50
2.97
3.17
2.2
1.5
—
—
—
0
0
5
5
10.26
3.00
1.4
1.0
—
—
—
0
0
5
5
10.26
3.00
1.4
1.0
—
—
—
0
0
19
83
2.46
2.97
6.5
6.3
1.13
1.37
mmol/l
0.52
19
83
39
229
1.93
2.95
4.3
2.5
2.46
2.44
mmol/l
0.30
31
208
59
396
1.77
2.92
6.6
2.8
2.34
2.36
mmol/l
0.45
50
355
7
13
5.57
2.90
2.3
1.2
—
—
—
0
0
8
18
4.62
2.83
5.9
2.4
65.25
53.56
%
—
8
18
5
6
8.55
2.77
1.4
1.0
—
—
—
0
0
20
93
2.31
2.74
1.6
2.2
6.82
6.63
ug/l
0.02
14
83
8
19
4.37
2.71
1.8
1.1
—
—
—
0
0
7
15
4.82
2.62
1.7
1.2
—
—
—
0
0
71
516
1.67
2.57
3.3
2.5
239.96
97.69
ug/l
1.95
63
470
14
57
2.59
2.52
1.4
1.2
—
—
—
0
0
8
21
3.95
2.50
1.5
2.3
—
—
—
0
0
39
242
1.81
2.47
1.7
1.7
1.52
0.87
mg/l
0.72
32
193
45
293
1.74
2.42
3.6
2.4
321.27
9328.43
umol/l
1.98
37
256
5
8
6.40
2.39
1.0
1.0
—
—
—
0
0
5
8
6.40
2.39
1.8
1.0
—
—
—
0
0
31
182
1.87
2.33
1.5
1.4
—
—
—
0
0
57
401
1.65
2.30
5.2
2.8
—
—
—
0
0
9
29
3.22
2.26
1.0
1.1
—
—
—
0
0
8
24
3.45
2.21
2.0
1.6
115.00
130.60
ug/l
—
8
24
73
551
1.59
2.19
3.7
2.2
—
—
—
0
0
6
15
4.11
2.06
1.5
1.4
—
—
—
0
0
10
38
2.74
2.04
3.5
1.9
—
—
—
0
0
9
33
2.83
1.96
1.6
1.3
—
—
—
0
0
137
1222
1.78
1.92
34.6
10.9
27.65
21.42
mg/l
1.27
117
925
13
59
2.31
1.90
9.1
5.1
27.06
25.02
mmol/l
0.81
13
59
46
322
1.60
1.85
3.9
2.7
0.16
0.36
e6/l
1.37
37
230
110
934
1.55
1.83
4.1
3.6
14.99
14.66
pmol/l
0.63
100
838
14
67
2.19
1.82
9.4
8.1
0.61
0.67
%
0.24
14
67
14
67
2.19
1.82
9.4
7.7
1.39
1.39
%
0.00
14
67
30
189
1.72
1.79
2.7
2.6
1.48
1.07
e6/l
0.21
17
103
38
260
1.60
1.67
1.4
1.2
4.95
1.10
u/ml
0.45
11
72
85
694
1.47
1.64
6.7
3.9
6.65
6.50
mmol/l
0.27
85
638
5
14
3.65
1.62
1.0
1.4
—
—
—
0
0
5
14
3.65
1.62
1.0
1.4
—
—
—
0
0
16
85
1.98
1.61
6.2
2.7
3.62
2.12
mmol/l
0.84
16
73
19
108
1.86
1.59
5.3
3.3
—
—
—
0
0
6
21
2.93
1.52
1.2
1.6
—
—
—
0
0
5
16
3.19
1.45
1.0
1.2
—
—
—
0
0
5
16
3.19
1.45
1.0
1.2
—
—
—
0
0
6
22
2.79
1.45
1.7
1.7
—
—
—
0
0
71
573
1.43
1.39
4.6
3.5
0.00
0.00
estimate
-0.00
16
118
5
17
3.00
1.37
1.0
1.2
—
—
—
0
0
5
17
3.00
1.37
1.0
1.2
—
—
—
0
0
5
17
3.00
1.37
1.0
1.2
—
—
—
0
0
6
24
2.56
1.31
1.5
1.5
—
—
—
0
0
26
172
1.61
1.31
2.7
2.8
1.69
2.55
e6/l
0.28
13
88
99
854
1.41
1.30
4.9
2.6
66.40
47.01
u/l
0.92
91
796
60
477
1.41
1.26
2.6
2.1
74.85
77.63
nmol/l
0.35
51
413
15
86
1.82
1.24
11.5
2.8
1.22
1.23
mmol/l
0.25
15
73
5
19
2.68
1.22
1.2
1.7
—
—
—
0
0
6
26
2.36
1.20
1.2
1.2
—
—
—
0
0
38
280
1.47
1.19
1.6
1.5
23.15
21.22
nmol/l
0.38
33
234
5
20
2.55
1.16
1.2
1.1
—
—
—
0
0
10
51
2.02
1.14
9.0
8.9
25.89
24.64
mmol/l
—
10
51
24
162
1.57
1.12
4.3
2.0
2.32
2.44
g/l
0.42
24
147
5
21
2.42
1.10
1.2
1.2
—
—
—
0
0
14
83
1.75
1.05
4.6
2.1
53.83
70.13
ml/min/173m2
—
6
30
69
579
1.33
1.00
6.0
4.7
0.00
0.00
estimate
-0.00
15
106
69
580
1.33
0.98
4.8
3.5
0.00
0.00
estimate
-0.00
13
107
7
36
1.99
0.98
1.7
1.3
1.09
1.19
g/l
—
7
36
7
36
1.99
0.98
3.1
1.3
0.20
0.24
g/l
—
7
36
128
1184
1.39
0.91
24.9
10.8
81.31
82.34
ml/min/173m2
0.18
109
969
6
29
2.11
0.90
3.0
1.4
83.50
90.76
pmol/l
—
6
29
5
24
2.12
0.75
1.2
1.1
—
—
—
0
0
88
788
1.26
0.71
3.2
2.9
—
—
—
0
0
5
26
1.95
0.71
1.2
1.3
—
—
—
0
0
26
332
0.74
0.67
4.6
4.0
19.24
22.07
%
0.60
15
161
122
1140
1.28
0.66
5.2
4.4
1.80
3.00
mu/l
0.58
114
1031
28
221
1.32
0.61
1.4
1.3
16.30
30.84
iu/ml
—
5
72
37
307
1.27
0.56
5.9
3.8
0.00
0.01
estimate
0.50
14
108
9
61
1.50
0.55
2.4
1.9
—
—
—
0
0
7
48
1.48
0.47
2.6
1.8
—
—
—
0
0
5
32
1.58
0.42
1.8
1.2
661.20
558.41
mg/l
—
5
32
0
18
0.00
0.40
0.0
1.1
—
—
—
0
0
28
235
1.23
0.39
1.3
1.9
440.63
456.62
pmol/l
0.12
19
195
40
350
1.19
0.38
6.1
3.4
18.18
6.18
mg/mmol
1.03
22
203
123
1274
0.86
0.32
5.3
4.8
2.81
2.77
mmol/l
0.17
114
1166
25
213
1.21
0.31
1.4
1.3
11.69
8.35
u/ml
—
8
92
21
248
0.82
0.30
2.6
2.9
0.66
0.75
ug/l
0.14
12
155
137
1334
1.17
0.26
33.5
13.2
85.50
75.28
umol/l
0.75
137
1334
25
217
1.18
0.26
1.9
1.5
—
—
—
0
0
17
142
1.22
0.26
14.4
6.7
—
—
—
0
0
0
12
0.00
0.21
0.0
4.2
—
24.31
—
0
12
0
12
0.00
0.21
0.0
1.6
—
13.20
—
0
12
17
146
1.18
0.20
1.6
1.8
1.85
1.44
%
0.84
12
134
122
1252
0.90
0.20
4.8
4.2
4.70
4.68
mmol/l
0.07
114
1157
121
1242
0.90
0.19
4.6
4.2
1.48
1.49
mmol/l
0.04
112
1141
38
409
0.91
0.16
6.9
4.8
1.43
2.03
ug/l
1.62
38
359
111
1081
1.09
0.15
28.6
13.8
15.54
14.92
%
0.43
106
1067
12
136
0.87
0.11
3.3
2.4
—
—
—
0
0
5
45
1.11
0.10
1.2
1.4
—
—
—
0
0
11
124
0.88
0.09
2.7
2.2
—
—
—
0
0
6
54
1.12
0.09
1.3
1.4
—
—
—
0
0
7
65
1.08
0.08
3.6
3.6
4.52
4.66
pmol/l
—
7
59
34
327
1.05
0.05
1.6
1.6
1.30
1.30
mmol/l
0.02
25
279
114
1153
0.96
0.05
6.5
5.3
40.68
39.39
mmol/mol
0.64
109
1072
139
1399
0.95
0.03
43.9
16.7
4.28
4.53
e12/l
6.35
133
1363
139
1398
0.96
0.02
44.3
16.8
38.06
40.64
%
4.08
134
1308
139
1396
0.97
0.00
43.7
16.8
269.35
248.95
e9/l
1.97
133
1363
12
119
1.01
0.00
1.7
1.7
—
—
—
0
0
123
1231
1.00
0.00
5.4
4.3
6.26
5.88
mmol/l
0.95
110
1128
46
457
1.01
0.00
5.6
3.6
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.6
—
203.40
—
0
5
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
9.15
—
0
5
5
57
0.87
-0.00
1.0
1.1
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.0
—
—
—
0
0
120
1200
1.00
-0.00
4.3
3.8
1.33
1.27
mmol/l
0.34
110
1096
0
9
0.00
-0.00
0.0
1.3
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: AB1_ACTINOMYCOSIS_WIDE – Actinomycosis
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).