No definition available.
Other congenital malformations of female genitalia
Q17_OTHER_CONGEN_MALFO_FEMALE_GENITALIA
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleonly females |
293373 |
2. Check conditionsNone |
293373 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
344 |
4. Check minimum number of eventsNone |
344 |
5. Include endpointsNone |
344 |
6. Filter based on genotype QC (FinnGen only) |
344 |
Control definitions (FinnGen only)
- Control exclude
- Q17_CONGEN_MALFO_GENITAL_ORGANS
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF12
- Parent code in ICD-10
- Q5
- Name in latin
- Aliae malformationes congenitae organorum genitalium femininorum
Similar endpoints
↥List of similar endpoints to
Other congenital malformations of female genitalia
based on the number of shared cases.
Similar with more cases:
- Congenital malformations of genital organs
- Congenital malformations, deformations and chromosomal abnormalities
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 344 | 344 | - |
| Unadjusted period prevalence (%) | 0.12 | 0.12 | - |
| Median age at first event (years) | 21.31 | 21.31 | - |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
No data
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 318
- Matched controls
- 3181
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
Q52.4
ICD-10 Finland
Other congenital malformations of vagina
+∞
80.7
74
*
Q52.1
ICD-10 Finland
Doubling of vagina
+∞
61.5
57
*
Q52.3
ICD-10 Finland
Imperforate hymen
+∞
53.7
50
*
LFA10
NOMESCO Finland
Incision of imperforate hymen or remnant of hymen
144.2
47.2
49
*
Q52.0
ICD-10 Finland
Congenital absence of vagina
+∞
39.4
37
*
Q52.5
ICD-10 Finland
Fusion of labia
+∞
37.2
35
*
Q52.8
ICD-10 Finland
Other specified congenital malformations of female genitalia
+∞
29.6
28
*
Q51.0
ICD-10 Finland
Agenesis and aplasia of uterus
+∞
25.3
24
*
LEC10
NOMESCO Finland
Excision of vaginal septum
+∞
25.3
24
*
Q52.7
ICD-10 Finland
Other congenital malformations of vulva
+∞
22.1
21
*
Q52.9
ICD-10 Finland
Congenital malformation of female genitalia, unspecified
+∞
20.0
19
*
Q51.2
ICD-10 Finland
Other doubling of uterus
+∞
18.9
18
*
LEB10
NOMESCO Finland
Excision of lesion of vagina
27.0
18.5
25
10
Q51.1
ICD-10 Finland
Doubling of uterus with doubling of cervix and vagina
+∞
17.9
17
*
LEE96
NOMESCO Finland
Other repair of vagina
84.1
14.7
16
*
LFA00
NOMESCO Finland
Incision of vulva or perineum
48.6
12.0
14
*
N89.7
ICD-10 Finland
Haematocolpos
124.3
11.5
12
*
N89.8
ICD-10 Finland
Other specified noninflammatory disorders of vagina
19.6
10.4
15
8
N91.0
ICD-10 Finland
Primary amenorrhoea
18.2
9.5
14
8
LEB20
NOMESCO Finland
Marsupialisation of vaginal cyst
+∞
9.4
9
*
Z09.0
ICD-10 Finland
Follow-up examination after surgery for other conditions
3.7
8.5
37
110
Q51.3
ICD-10 Finland
Bicornate uterus
+∞
8.4
8
*
N89.6
ICD-10 Finland
Tight hymenal ring
17.8
8.1
12
7
LFE10
NOMESCO Finland
Plastic repair of vulva
22.7
8.1
11
5
UKC02
NOMESCO Finland
Cystoscopy
3.4
7.2
34
108
LC2BE
NOMESCO Finland
Transvaginal ultrasound examination of uterus, parametria and lower abdomen
1.9
6.9
144
967
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
172
1364
1.52
3.61
4.4
3.8
6.2
6.1
mmol/l
0.43
153
1168
111
807
1.55
3.44
3.7
4.1
36.9
37.2
g/l
0.29
100
755
110
813
1.52
3.12
4.1
3.3
0.0
0.0
estimate
0.40
44
328
18
75
2.48
3.02
3.2
1.8
2.1
5.0
ug/l
1.63
12
68
38
219
1.83
2.83
7.0
4.0
—
—
—
0
0
96
712
1.48
2.63
2.6
2.5
2.4
2.3
mmol/l
0.22
88
638
115
884
1.45
2.62
6.6
4.8
1.2
1.2
mmol/l
0.89
102
802
301
2778
1.67
2.56
5.2
4.8
1.7
1.7
mu/l
0.11
289
2620
271
2447
1.51
2.49
4.5
4.2
14.5
14.3
pmol/l
0.81
256
2260
22
114
1.99
2.26
3.2
3.4
0.0
0.8
mmol/l
0.30
15
78
43
276
1.64
2.22
1.5
1.5
24.6
18.3
iu/l
0.48
35
230
22
118
1.92
2.07
3.2
3.4
5.2
5.0
kpa
0.30
22
111
89
679
1.42
2.06
2.7
2.2
50.4
56.3
u/l
1.03
82
622
310
2917
1.63
2.00
8.0
7.2
21.5
22.6
u/l
0.95
302
2820
123
999
1.36
1.95
6.7
5.3
1.2
1.2
mmol/l
0.16
99
844
307
2887
1.59
1.92
10.9
9.2
20.2
18.3
mg/l
0.42
230
2176
232
2081
1.35
1.86
4.0
3.8
36.5
36.8
mmol/mol
0.18
216
1957
167
1428
1.33
1.86
4.1
4.0
—
—
—
0
0
13
61
2.18
1.74
2.5
2.9
1.5
1.2
g/l
0.86
13
51
101
813
1.34
1.67
3.5
2.9
—
—
—
0
0
31
198
1.62
1.66
2.0
2.6
—
—
—
0
0
14
70
2.04
1.61
5.6
9.1
0.7
0.7
%
0.21
14
70
14
70
2.04
1.61
5.1
9.1
1.5
1.2
%
0.69
14
70
22
129
1.75
1.61
8.3
6.8
1.8
1.0
mmol/l
0.28
12
97
138
1167
1.30
1.61
3.8
3.0
—
—
—
0
0
283
2646
1.39
1.55
11.1
8.4
139.4
139.5
mmol/l
0.19
271
2554
21
123
1.75
1.54
1.8
1.7
—
—
—
0
0
44
313
1.47
1.49
2.3
2.0
2.4
2.4
mmol/l
0.41
37
268
77
607
1.35
1.45
1.7
1.8
0.7
0.8
mg/l
0.08
55
431
43
308
1.45
1.41
1.5
1.7
—
—
—
0
0
213
1926
1.28
1.40
2.5
2.6
29.8
28.3
u/l
0.13
197
1846
23
143
1.65
1.39
3.0
1.9
57.8
86.9
ml/min/173m2
—
6
48
6
23
2.64
1.37
1.5
1.7
—
—
—
0
0
5
17
2.97
1.36
1.0
1.4
—
—
—
0
0
130
1113
1.27
1.33
3.9
4.5
9.7
9.2
umol/l
0.42
123
1034
282
2654
1.35
1.32
11.1
8.4
3.9
3.9
mmol/l
0.14
270
2550
170
1506
1.25
1.29
3.7
3.0
0.0
0.0
estimate
0.50
43
325
170
1509
1.25
1.26
4.6
4.2
0.0
0.0
estimate
0.00
43
334
171
1525
1.24
1.20
3.7
3.1
0.0
0.0
estimate
0.00
43
328
53
414
1.33
1.07
1.6
1.6
142222595.5
59350029.0
pmol/l
0.24
45
369
75
620
1.27
1.01
4.1
2.5
81.0
19.6
ng/l
0.64
35
211
263
2482
1.25
1.00
3.4
3.1
2.7
2.8
mmol/l
0.34
245
2340
5
23
2.19
0.98
1.0
1.8
—
—
—
0
0
199
1828
1.21
0.97
5.8
5.6
69.4
71.3
u/l
0.38
188
1700
25
175
1.46
0.96
1.4
1.5
—
—
—
0
0
36
272
1.36
0.92
1.1
1.0
—
—
—
0
0
214
1986
1.21
0.91
3.7
3.5
8.3
8.9
mm/h
0.41
195
1845
45
354
1.31
0.89
1.7
1.6
—
—
—
0
0
77
652
1.23
0.85
1.8
1.7
—
—
—
0
0
100
875
1.20
0.80
2.6
2.7
24.0
26.6
u/l
1.26
91
838
7
123
0.56
0.79
1.1
1.4
—
—
—
0
0
27
200
1.38
0.79
2.7
1.9
27.1
43.0
u/ml
0.60
27
190
6
34
1.78
0.76
1.3
1.3
—
—
—
0
0
58
483
1.24
0.75
1.3
1.3
21.6
20.9
nmol/l
0.13
51
419
195
1815
1.17
0.74
2.9
2.8
62.5
51.8
ug/l
0.76
185
1709
29
375
0.75
0.73
1.9
1.8
—
—
—
0
0
11
68
1.64
0.72
2.8
6.1
1.6
1.2
mg/l
0.98
11
62
21
285
0.72
0.72
1.2
1.4
—
—
—
0
0
257
2450
1.19
0.72
3.3
3.0
5.6
5.5
mmol/l
0.56
234
2272
259
2471
1.19
0.71
3.2
3.0
4.6
4.7
mmol/l
0.25
241
2349
5
26
1.94
0.71
1.8
2.5
—
—
—
0
0
22
161
1.39
0.70
4.5
6.9
105.7
105.3
mmol/l
0.15
22
156
125
1130
1.17
0.68
2.3
2.2
74.7
71.3
nmol/l
0.64
118
1047
95
841
1.18
0.66
1.8
1.6
103.8
96.1
pmol/l
0.94
58
471
7
44
1.60
0.65
1.9
1.5
—
—
—
0
0
57
482
1.22
0.65
2.8
2.3
6572.8
5366.5
u/l
0.10
22
197
5
29
1.73
0.64
1.0
1.1
—
—
—
0
0
8
50
1.61
0.61
1.5
1.5
—
—
—
0
0
5
30
1.68
0.61
1.0
1.1
—
—
—
0
0
256
2456
1.17
0.58
3.2
3.0
1.5
1.5
mmol/l
0.27
239
2328
63
546
1.19
0.57
1.6
1.8
110.6
250.4
u/l
0.62
56
514
75
662
1.17
0.55
2.7
2.6
0.2
0.3
e6/l
0.45
63
487
127
1166
1.14
0.54
1.7
1.8
—
—
—
0
0
37
306
1.23
0.53
1.8
1.6
1064.3
1091.0
nmol/l
0.06
22
239
6
39
1.55
0.53
1.0
1.1
—
—
—
0
0
30
243
1.26
0.51
1.3
1.3
166.0
274.8
miu/ml
1.34
16
118
55
476
1.19
0.51
1.4
1.4
—
—
—
0
0
40
336
1.22
0.50
1.7
1.3
—
—
—
0
0
7
45
1.57
0.49
3.4
1.3
—
—
—
0
0
242
2325
1.14
0.49
3.0
2.7
1.2
1.1
mmol/l
0.39
224
2197
17
128
1.35
0.48
2.5
5.9
24.5
24.7
mmol/l
0.10
17
128
273
2646
1.15
0.47
12.5
11.2
13.2
13.3
%
0.57
265
2599
23
183
1.28
0.46
2.0
1.5
6.2
10.3
u/l
2.29
18
150
7
49
1.44
0.46
1.0
1.2
—
—
—
0
0
7
50
1.41
0.45
1.0
1.1
111.9
115.6
%
—
7
45
35
294
1.21
0.45
1.5
1.5
256.9
298.7
mu/l
0.64
29
262
18
229
0.77
0.44
2.3
2.2
28.2
32.4
u/l
0.34
18
186
5
31
1.62
0.43
1.0
1.3
—
—
—
0
0
5
31
1.62
0.43
1.0
1.3
—
—
—
0
0
5
31
1.62
0.43
1.0
1.3
—
—
—
0
0
5
32
1.57
0.42
1.0
1.3
—
—
—
0
0
5
32
1.57
0.42
1.0
1.3
—
—
—
0
0
5
32
1.57
0.42
1.0
1.3
—
—
—
0
0
16
204
0.77
0.40
1.7
1.6
—
—
—
0
0
7
101
0.69
0.40
4.1
5.9
23.0
23.8
mmol/l
—
7
95
0
18
0.00
0.40
0.0
1.9
—
—
—
0
0
5
36
1.39
0.38
1.0
1.1
—
—
—
0
0
5
37
1.36
0.37
1.0
1.1
—
—
—
0
0
5
37
1.36
0.37
1.0
1.1
—
—
—
0
0
54
481
1.15
0.37
2.7
2.5
9225.6
2911.7
umol/l
0.31
47
441
16
201
0.79
0.36
1.6
1.5
—
—
—
0
0
11
81
1.37
0.36
2.1
2.9
3.8
3.6
g/l
0.15
11
76
35
302
1.18
0.35
3.5
2.7
1049.9
813.9
ng/l
0.27
30
235
253
2458
1.11
0.35
8.7
7.6
96.7
99.0
ml/min/173m2
0.73
200
1877
6
44
1.37
0.34
1.0
1.1
—
—
—
0
0
104
969
1.11
0.34
1.4
1.3
2.1
1.6
u/ml
0.18
26
245
10
74
1.36
0.32
1.0
1.1
—
—
—
0
0
14
110
1.28
0.32
1.8
1.4
—
—
—
0
0
36
409
0.87
0.31
1.4
1.5
—
—
—
0
0
45
401
1.14
0.31
5.1
4.1
11.3
13.6
mg/mmol
0.19
28
265
41
364
1.14
0.30
1.2
1.3
149.0
161.3
iu/ml
0.07
18
136
7
55
1.28
0.30
1.0
1.0
—
—
—
0
0
31
354
0.86
0.29
3.1
2.4
8.9
5.8
e6/l
0.36
22
185
8
62
1.30
0.28
1.0
1.2
—
—
—
0
0
27
234
1.17
0.27
4.6
2.9
32.1
32.7
%
0.09
20
172
49
537
0.90
0.26
1.4
1.3
42.8
22.0
iu/ml
0.36
16
154
76
814
0.91
0.25
2.1
2.0
—
—
—
0
0
167
1608
1.07
0.25
6.7
7.2
4.1
3.9
e9/l
0.34
150
1414
35
313
1.13
0.24
2.5
2.5
494.4
328.0
ng/l
0.13
14
124
5
39
1.29
0.23
1.0
1.1
—
—
—
0
0
10
79
1.27
0.22
1.7
1.5
—
—
—
0
0
30
267
1.14
0.22
1.5
1.5
—
—
—
0
0
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
0
11
0.00
0.21
0.0
2.8
—
—
—
0
0
0
11
0.00
0.21
0.0
2.8
—
—
—
0
0
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
0
10
0.00
0.21
0.0
1.7
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
8
104
0.76
0.21
3.0
1.4
11.4
16.1
u/l
—
8
88
0
12
0.00
0.21
0.0
1.0
—
—
—
0
0
0
12
0.00
0.21
0.0
1.1
—
—
—
0
0
0
13
0.00
0.21
0.0
1.0
—
—
—
0
0
0
13
0.00
0.21
0.0
1.0
—
—
—
0
0
6
48
1.25
0.20
3.8
2.7
0.6
0.9
nmol/l
—
6
42
0
14
0.00
0.20
0.0
1.4
—
—
—
0
0
6
50
1.20
0.20
1.8
1.7
—
—
—
0
0
18
207
0.86
0.19
1.3
1.3
—
—
—
0
0
104
995
1.06
0.18
1.5
1.5
—
—
—
0
0
11
132
0.83
0.18
3.7
4.4
3.8
4.7
kpa
1.24
11
127
7
61
1.15
0.17
2.4
1.7
12.8
13.2
%
—
7
61
12
101
1.19
0.17
2.3
2.6
67.3
67.0
g/l
0.05
12
94
20
177
1.14
0.16
1.9
1.6
5.8
3.5
mg/l
0.42
12
116
8
71
1.13
0.16
1.4
1.5
781.5
56.6
e6/l
—
8
59
10
83
1.21
0.15
1.0
1.2
—
—
—
0
0
9
82
1.10
0.15
1.0
1.2
—
—
—
0
0
7
86
0.81
0.14
1.9
1.2
—
—
—
0
0
71
744
0.94
0.14
2.5
2.0
2.7
2.6
mg/l
0.15
58
642
10
118
0.84
0.14
1.3
1.2
—
—
—
0
0
104
1073
0.96
0.12
2.4
2.2
—
—
—
0
0
11
96
1.15
0.10
1.5
2.0
—
—
—
0
0
11
96
1.15
0.10
2.3
2.0
36.5
37.9
u/l
0.09
11
88
15
135
1.12
0.10
1.2
1.8
—
—
—
0
0
5
45
1.11
0.10
1.2
1.2
—
—
—
0
0
5
45
1.11
0.10
1.2
1.2
—
—
—
0
0
16
176
0.90
0.09
1.2
1.1
—
—
—
0
0
19
174
1.10
0.09
2.1
2.2
—
—
—
0
0
114
1168
0.96
0.09
2.6
2.4
—
—
—
0
0
331
3296
1.11
0.08
16.6
13.8
132.9
132.1
g/l
0.75
326
3261
6
74
0.81
0.07
1.8
1.2
—
47.1
—
0
7
30
316
0.94
0.07
1.6
1.7
—
—
—
0
0
7
80
0.87
0.07
2.1
2.2
—
—
—
0
0
8
91
0.88
0.07
2.6
2.3
—
—
—
0
0
8
92
0.87
0.07
2.1
1.5
—
—
—
0
0
288
2897
0.96
0.06
11.1
9.7
39.8
39.5
%
0.47
238
2414
57
587
0.97
0.06
1.7
1.6
1.4
1.3
mmol/l
0.32
49
520
39
405
0.96
0.06
1.8
1.5
1.5
1.3
%
1.51
34
372
51
525
0.97
0.05
1.5
1.2
1.5
9.0
u/ml
3.22
20
219
73
719
1.02
0.02
1.5
1.5
—
—
—
0
0
15
158
0.95
0.02
1.3
1.6
—
—
—
0
0
37
379
0.97
0.02
1.3
1.4
—
—
—
0
0
11
117
0.94
0.02
1.4
1.4
—
—
—
0
0
37
378
0.98
0.01
1.3
1.4
—
—
—
0
0
37
378
0.98
0.01
1.3
1.4
—
—
—
0
0
279
2782
1.02
0.01
4.5
4.2
—
—
—
0
0
37
377
0.98
0.01
1.3
1.4
—
—
—
0
0
14
146
0.96
0.00
1.6
1.4
—
—
—
0
0
64
642
1.00
0.00
2.0
1.8
—
—
—
0
0
27
269
1.00
0.00
1.7
2.6
5.7
5.0
umol/l
0.27
21
213
37
367
1.01
0.00
2.6
2.3
1.6
1.1
e6/l
0.39
28
196
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
0
6
0.00
0.00
0.0
2.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.2
—
1.2
—
0
5
0
6
0.00
0.00
0.0
2.7
—
—
—
0
0
0
5
0.00
0.00
0.0
1.4
—
—
—
0
0
0
7
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.7
—
—
—
0
0
0
7
0.00
0.00
0.0
1.9
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
9
90
1.00
0.00
1.7
2.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.3
—
35.6
—
0
9
8
80
1.00
0.00
5.4
2.2
133.9
102.8
ng/l
—
8
73
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
2.4
—
—
—
0
0
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
5
56
0.89
0.00
1.0
1.3
—
—
—
0
0
0
9
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.4
—
—
—
0
0
5
59
0.85
0.00
1.4
1.2
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
0.00
0.0
1.8
—
—
—
0
0
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
0
8
0.00
0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
0.00
0.0
2.4
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: Q17_OTHER_CONGEN_MALFO_FEMALE_GENITALIA – Other congenital malformations of female genitalia
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).