No definition available.
Other congenital malformations of female genitalia
Q17_OTHER_CONGEN_MALFO_FEMALE_GENITALIA
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleonly females |
293373 |
2. Check conditionsNone |
293373 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
344 |
4. Check minimum number of eventsNone |
344 |
5. Include endpointsNone |
344 |
6. Filter based on genotype QC (FinnGen only) |
344 |
Control definitions (FinnGen only)
- Control exclude
- Q17_CONGEN_MALFO_GENITAL_ORGANS
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF12
- Parent code in ICD-10
- Q5
- Name in latin
- Aliae malformationes congenitae organorum genitalium femininorum
Similar endpoints
↥List of similar endpoints to
Other congenital malformations of female genitalia
based on the number of shared cases.
Similar with more cases:
- Congenital malformations of genital organs
- Congenital malformations, deformations and chromosomal abnormalities
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 344 | 344 | - |
| Unadjusted period prevalence (%) | 0.12 | 0.12 | - |
| Median age at first event (years) | 21.31 | 21.31 | - |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
No data
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 318
- Matched controls
- 3181
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
Q52.4
ICD-10 Finland
Other congenital malformations of vagina
+∞
80.7
74
*
Q52.1
ICD-10 Finland
Doubling of vagina
+∞
61.5
57
*
Q52.3
ICD-10 Finland
Imperforate hymen
+∞
53.7
50
*
LFA10
NOMESCO Finland
Incision of imperforate hymen or remnant of hymen
144.2
47.2
49
*
Q52.0
ICD-10 Finland
Congenital absence of vagina
+∞
39.4
37
*
Q52.5
ICD-10 Finland
Fusion of labia
+∞
37.2
35
*
Q52.8
ICD-10 Finland
Other specified congenital malformations of female genitalia
+∞
29.6
28
*
LEC10
NOMESCO Finland
Excision of vaginal septum
+∞
25.3
24
*
Q51.0
ICD-10 Finland
Agenesis and aplasia of uterus
+∞
25.3
24
*
Q52.7
ICD-10 Finland
Other congenital malformations of vulva
+∞
22.1
21
*
Q52.9
ICD-10 Finland
Congenital malformation of female genitalia, unspecified
+∞
20.0
19
*
Q51.2
ICD-10 Finland
Other doubling of uterus
+∞
18.9
18
*
LEB10
NOMESCO Finland
Excision of lesion of vagina
27.0
18.5
25
10
Q51.1
ICD-10 Finland
Doubling of uterus with doubling of cervix and vagina
+∞
17.9
17
*
LEE96
NOMESCO Finland
Other repair of vagina
84.1
14.7
16
*
LFA00
NOMESCO Finland
Incision of vulva or perineum
48.6
12.0
14
*
N89.7
ICD-10 Finland
Haematocolpos
124.3
11.5
12
*
N89.8
ICD-10 Finland
Other specified noninflammatory disorders of vagina
19.6
10.4
15
8
N91.0
ICD-10 Finland
Primary amenorrhoea
18.2
9.5
14
8
LEB20
NOMESCO Finland
Marsupialisation of vaginal cyst
+∞
9.4
9
*
Z09.0
ICD-10 Finland
Follow-up examination after surgery for other conditions
3.7
8.5
37
110
Q51.3
ICD-10 Finland
Bicornate uterus
+∞
8.4
8
*
N89.6
ICD-10 Finland
Tight hymenal ring
17.8
8.1
12
7
LFE10
NOMESCO Finland
Plastic repair of vulva
22.7
8.1
11
5
UKC02
NOMESCO Finland
Cystoscopy
3.4
7.2
34
108
LC2BE
NOMESCO Finland
Transvaginal ultrasound examination of uterus, parametria and lower abdomen
1.9
6.9
144
967
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: Q17_OTHER_CONGEN_MALFO_FEMALE_GENITALIA – Other congenital malformations of female genitalia
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).