Other mosquito-borne viral fevers

AB1_OTHER_MOSQUITO_FEVER_WIDE

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

519972

1. Apply sex-specific rule

None

519972

2. Check conditions

None

519972

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Primary healthcare outpatient: ICD-10 A92, A93
  • Hospital discharge: ICD-10 A92, A93
  • Hospital discharge: ICD-9 06[6]
  • Hospital discharge: ICD-8 06[7]
  • Cause of death: ICD-10 A92, A93
  • Cause of death: ICD-9 06[6]
  • Cause of death: ICD-8 06[7]

3 out of 7 registries used, show all original rules.

265

4. Check minimum number of events

None

265

5. Include endpoints

None

265

6. Filter based on genotype QC (FinnGen only)

259

Control definitions (FinnGen only)

Control exclude
AB1_ARTHROPOD

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF13

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

This endpoint is excluded (different definition than used in FinnGen).

-FinnGen-

Key figures

All Female Male
Number of individuals 259 157 102
Unadjusted period prevalence (%) 0.05 0.06 0.05
Median age at first event (years) 53.93 52.76 55.75

-FinnGen-

Age distribution of first events

-FinnGen-

Year distribution of first events

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
265
Matched controls
2650
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
A92.8
ICD-10 Finland
Other specified mosquito-borne viral fevers
+∞
273.7
213
*
A92.9
ICD-10 Finland
Mosquito-borne viral fever, unspecified
+∞
13.7
13
*
A92.0
ICD-10 Finland
Chikungunya virus disease
+∞
9.4
9
*
M13.9
ICD-10 Finland
Arthritis, unspecified
3.6
9.2
32
97
L20
ICPC
Joint symptom/complaint NOS
4.9
8.5
19
41
A92
ICD-10 Finland
Other mosquito-borne viral fevers
+∞
8.4
8
*
A93.8
ICD-10 Finland
Other specified arthropod-borne viral fevers
+∞
8.4
8
*
Z01.5
ICD-10 Finland
Diagnostic skin and sensitization tests
2.8
6.9
38
152
M25.5
ICD-10 Finland
Pain in joint
2.0
6.6
102
631
L30.9
ICD-10 Finland
Dermatitis, unspecified
2.3
6.5
60
305
ZYC01, ,
SPAT
2.8
6.3
34
134

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
99
539
2.34
9.56
3.6
3.2
0.00
0.01
estimate
0.80
27
196
36
144
2.74
6.52
3.8
3.4
—
—
—
0
0
75
457
1.89
4.88
4.0
3.1
—
—
—
0
0
81
522
1.79
4.36
1.7
2.5
6313.55
6120.78
umol/l
0.01
75
464
138
1040
1.68
4.18
4.5
4.5
0.00
0.00
estimate
0.50
27
201
73
461
1.81
4.18
4.4
3.2
1.02
1.02
kg/l
0.27
13
62
138
1055
1.64
3.85
3.7
3.2
0.00
0.00
estimate
-0.00
25
192
115
843
1.64
3.77
3.5
3.0
5.93
5.97
ph
0.05
15
82
136
1040
1.63
3.76
3.7
3.1
0.00
0.00
estimate
-0.00
26
210
62
392
1.76
3.49
1.3
1.3
24.32
29.00
iu/ml
0.13
15
142
19
77
2.58
3.38
9.3
8.2
—
—
—
0
0
243
2212
2.19
3.19
13.0
12.0
19.71
21.46
mg/l
0.42
208
1716
7
12
5.96
3.04
1.0
1.2
—
—
—
0
0
8
17
4.82
2.94
1.1
1.1
—
—
—
0
0
60
394
1.68
2.92
1.3
1.3
7.12
8.72
u/ml
0.10
33
159
15
62
2.50
2.59
1.9
5.6
—
—
—
0
0
186
1607
1.53
2.54
3.9
3.8
9.31
9.81
mm/h
0.27
177
1499
98
746
1.50
2.50
3.1
3.3
16.48
33.31
ng/l
1.77
54
432
191
1665
1.53
2.45
3.7
4.0
14.59
14.42
pmol/l
0.55
182
1547
6
12
5.09
2.41
1.0
1.2
—
—
—
0
0
24
131
1.91
2.16
1.4
1.2
—
—
—
0
0
84
640
1.46
2.08
2.7
2.5
55.32
64.31
u/l
0.58
78
602
16
77
2.15
2.01
1.1
1.2
—
—
—
0
0
42
279
1.60
1.95
1.4
2.3
156.55
125.14
ug/g
0.16
34
221
64
475
1.46
1.79
1.7
1.8
0.83
1.12
mg/l
0.73
48
367
229
2125
1.57
1.75
4.0
4.0
5.82
5.82
mmol/l
0.00
219
1974
7
24
2.97
1.73
1.3
1.3
—
—
—
0
0
5
13
3.90
1.72
1.0
1.2
—
—
—
0
0
22
130
1.75
1.59
1.2
1.2
—
—
—
0
0
44
597
0.68
1.49
1.4
1.6
1.46
1.39
mmol/l
0.14
38
515
35
238
1.54
1.49
1.7
1.8
—
—
—
0
0
248
2372
1.71
1.33
13.0
13.6
72.66
74.16
umol/l
0.61
248
2372
247
2362
1.67
1.30
10.6
10.9
—
—
—
0
0
16
92
1.79
1.28
1.4
1.2
—
—
—
0
0
47
614
0.71
1.28
3.6
2.9
8.31
8.20
mmol/l
0.06
41
529
8
36
2.26
1.25
1.0
1.2
—
—
—
0
0
6
25
2.43
1.25
1.3
3.2
—
—
—
0
0
165
1486
1.29
1.21
3.4
3.4
—
—
—
0
0
258
2513
2.01
1.13
17.7
17.6
40.85
40.68
%
0.20
249
2393
258
2514
1.99
1.13
17.7
17.5
30.11
30.26
pg
0.72
258
2488
258
2514
1.99
1.13
17.8
17.5
90.29
90.66
fl
0.73
258
2488
14
81
1.77
1.11
1.4
1.5
—
—
—
0
0
10
177
0.55
1.06
4.1
4.3
—
—
—
0
0
16
98
1.67
1.06
1.3
2.3
1.27
1.32
%
0.08
16
98
258
2518
1.93
1.02
17.9
17.7
137.10
136.93
g/l
0.07
258
2490
149
1344
1.25
1.00
4.5
3.8
—
642.59
—
0
22
232
2211
1.40
1.00
4.1
4.1
4.71
4.76
mmol/l
0.31
220
2089
45
567
0.75
0.96
3.3
3.7
4.37
7.99
mg/mmol
0.58
31
360
32
237
1.40
0.93
1.2
1.4
—
—
—
0
0
6
29
2.09
0.90
1.2
1.2
—
—
—
0
0
61
505
1.27
0.85
4.2
4.0
—
—
—
0
0
214
2029
1.28
0.85
4.3
4.6
1.76
2.41
mu/l
0.57
205
1896
53
640
0.79
0.82
2.0
2.3
—
—
—
0
0
37
288
1.33
0.81
1.3
1.4
—
—
—
0
0
230
2205
1.33
0.80
4.0
4.1
1.47
1.47
mmol/l
0.04
220
2071
176
1638
1.22
0.80
6.0
7.3
73.84
76.91
u/l
0.54
170
1553
33
254
1.34
0.78
1.5
1.5
—
—
—
0
0
0
27
0.00
0.78
0.0
1.1
—
—
—
0
0
11
67
1.67
0.76
1.5
1.7
—
—
—
0
0
8
134
0.58
0.75
6.8
2.5
63.50
54.52
u/ml
—
8
128
16
108
1.51
0.75
5.6
8.6
24.43
24.39
mmol/l
0.02
16
101
5
24
2.10
0.75
1.4
1.6
—
—
—
0
0
5
24
2.10
0.75
1.0
1.2
—
—
—
0
0
7
39
1.82
0.73
1.3
1.4
—
—
—
0
0
14
93
1.53
0.71
1.3
2.2
0.66
0.65
%
0.04
14
93
16
110
1.48
0.70
3.5
4.9
—
—
—
0
0
233
2248
1.30
0.68
4.4
4.4
2.80
2.86
mmol/l
0.55
220
2114
23
171
1.38
0.68
2.3
2.9
—
—
—
0
0
13
86
1.54
0.67
1.5
1.4
0.97
1.18
g/l
1.63
13
81
5
28
1.80
0.66
1.0
1.1
—
—
—
0
0
137
1261
1.18
0.65
7.0
9.4
3.80
4.03
e9/l
0.71
125
1105
22
164
1.37
0.65
5.0
8.1
125.91
123.39
g/l
0.25
22
159
39
317
1.27
0.64
1.4
1.3
—
—
—
0
0
38
308
1.27
0.64
1.4
1.6
1217.84
1176.77
nmol/l
0.10
31
240
35
281
1.28
0.64
1.5
2.0
—
—
—
0
0
45
534
0.81
0.60
3.0
3.1
37.81
51.14
mg/l
0.23
29
350
0
20
0.00
0.60
0.0
1.3
—
165.72
—
0
20
16
114
1.43
0.60
1.3
1.1
—
106.00
—
0
5
0
21
0.00
0.60
0.0
10.4
—
1013.10
—
0
21
0
21
0.00
0.60
0.0
15.9
—
1845.24
—
0
21
209
2001
1.21
0.60
4.7
5.1
38.86
39.26
mmol/mol
0.29
202
1898
221
2128
1.23
0.59
3.8
3.7
1.28
1.29
mmol/l
0.10
210
1988
0
23
0.00
0.58
0.0
1.3
—
387.30
—
0
23
0
23
0.00
0.58
0.0
1.5
—
1.38
—
0
16
21
159
1.35
0.57
1.3
1.4
—
—
—
0
0
6
36
1.68
0.57
2.3
3.3
3.99
5.09
e9/l
—
6
36
6
36
1.68
0.57
2.3
3.9
56.83
61.25
%
—
6
36
6
38
1.59
0.54
6.3
5.9
107.17
105.45
mmol/l
—
6
33
6
38
1.59
0.54
6.3
5.9
10.67
10.91
mmol/l
—
6
33
122
1125
1.16
0.54
4.6
5.6
2.17
1.86
e9/l
0.53
110
1005
69
610
1.18
0.52
2.6
2.8
—
—
—
0
0
67
591
1.18
0.52
4.7
4.5
1.94
1.92
ug/l
0.02
62
532
20
153
1.33
0.52
4.3
4.2
0.00
0.21
%
—
5
48
13
92
1.43
0.51
1.8
2.2
—
—
—
0
0
107
981
1.15
0.51
6.5
8.4
0.00
0.00
e9/l
0.29
93
795
24
299
0.78
0.50
3.0
2.4
3.94
2.31
e6/l
0.34
11
153
20
155
1.31
0.48
5.3
4.2
0.00
0.63
%
—
5
55
61
538
1.17
0.47
1.3
1.3
0.84
2.10
u/ml
1.00
28
164
118
1094
1.14
0.47
4.7
5.6
0.04
0.04
e9/l
0.15
102
955
34
403
0.82
0.46
1.6
1.7
—
—
—
0
0
14
103
1.38
0.46
1.5
2.1
—
—
—
0
0
118
1096
1.14
0.45
4.7
5.6
0.55
0.55
e9/l
0.00
102
956
20
157
1.30
0.45
4.9
4.2
0.00
0.13
%
—
5
52
22
177
1.26
0.42
5.0
7.7
96.86
95.87
%
0.77
22
169
0
15
0.00
0.41
0.0
1.2
—
—
—
0
0
0
15
0.00
0.41
0.0
2.1
—
—
—
0
0
0
15
0.00
0.41
0.0
1.1
—
—
—
0
0
43
373
1.18
0.41
1.6
1.7
435.00
442.66
pmol/l
0.08
34
330
8
59
1.37
0.41
1.4
1.2
—
75.71
—
0
7
0
16
0.00
0.41
0.0
1.3
—
71.00
—
0
16
0
16
0.00
0.41
0.0
2.6
—
—
—
0
0
0
16
0.00
0.41
0.0
2.1
—
10.74
—
0
16
0
17
0.00
0.41
0.0
1.4
—
0.89
—
0
17
0
17
0.00
0.41
0.0
1.2
—
—
—
0
0
47
412
1.17
0.40
2.6
2.4
3.91
5.34
e6/l
0.42
42
371
0
18
0.00
0.40
0.0
1.3
—
0.47
—
0
12
33
280
1.20
0.40
1.4
1.2
—
—
—
0
0
0
19
0.00
0.39
0.0
1.1
—
—
—
0
0
0
19
0.00
0.39
0.0
3.1
—
42.20
—
0
8
5
36
1.40
0.38
2.4
2.0
—
—
—
0
0
62
560
1.14
0.36
4.0
6.7
—
—
—
0
0
5
77
0.64
0.36
1.2
1.8
47.80
38.39
nmol/l
—
5
77
21
172
1.24
0.35
4.8
4.1
0.00
0.82
%
—
5
68
121
1141
1.11
0.34
4.7
6.0
0.19
0.18
e9/l
0.09
109
1010
16
127
1.28
0.34
3.1
2.4
—
—
—
0
0
167
1603
1.11
0.34
2.3
3.0
40.27
45.53
u/l
0.70
160
1536
56
505
1.14
0.34
2.8
3.5
—
—
—
0
0
6
88
0.67
0.33
1.0
2.8
—
—
—
0
0
151
1443
1.11
0.33
3.6
3.7
—
—
—
0
0
10
132
0.75
0.33
1.9
3.3
53.82
76.64
ng/l
—
10
117
39
344
1.16
0.32
2.9
2.7
0.69
0.72
ug/l
0.08
16
206
88
941
0.90
0.30
4.2
6.3
1.22
1.21
mmol/l
0.24
76
807
7
55
1.28
0.30
1.0
1.1
—
—
—
0
0
8
62
1.30
0.28
2.3
2.4
—
—
—
0
0
8
67
1.20
0.26
1.1
1.2
—
—
—
0
0
10
127
0.78
0.26
1.0
1.1
—
—
—
0
0
9
74
1.22
0.25
1.3
1.9
1.47
1.54
g/l
—
9
64
12
147
0.81
0.24
4.8
7.0
—
—
—
0
0
5
40
1.25
0.22
1.0
1.1
—
—
—
0
0
52
480
1.10
0.22
1.5
1.3
2.07
2.23
g/l
0.48
41
305
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
0
11
0.00
0.21
0.0
1.6
—
8.73
—
0
11
0
11
0.00
0.21
0.0
2.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
0
11
0.00
0.21
0.0
1.0
—
—
—
0
0
0
10
0.00
0.21
0.0
1.1
—
176.77
—
0
10
0
10
0.00
0.21
0.0
1.8
—
2.06
—
0
10
0
10
0.00
0.21
0.0
1.1
—
—
—
0
0
0
10
0.00
0.21
0.0
1.8
—
4.77
—
0
10
0
10
0.00
0.21
0.0
1.0
—
—
—
0
0
0
12
0.00
0.21
0.0
1.4
—
24.92
—
0
12
0
12
0.00
0.21
0.0
7.3
—
—
—
0
0
21
183
1.16
0.21
1.5
1.4
—
—
—
0
0
0
13
0.00
0.21
0.0
1.4
—
1.50
—
0
13
0
14
0.00
0.20
0.0
3.6
—
21.93
—
0
14
0
14
0.00
0.20
0.0
1.4
—
1.89
—
0
14
0
14
0.00
0.20
0.0
1.1
—
—
—
0
0
11
90
1.23
0.19
8.3
7.8
—
—
—
0
0
21
238
0.87
0.19
1.1
1.3
—
—
—
0
0
29
261
1.12
0.19
1.2
1.3
—
—
—
0
0
22
194
1.15
0.19
5.2
7.5
1.85
1.03
mmol/l
0.81
15
155
54
504
1.09
0.19
1.7
2.0
—
—
—
0
0
22
195
1.14
0.18
5.2
7.2
5.25
5.03
kpa
0.88
22
186
22
195
1.14
0.18
5.2
7.2
11.35
12.43
kpa
0.88
22
187
25
277
0.89
0.17
1.6
1.9
—
—
—
0
0
8
68
1.18
0.17
5.0
5.5
1.10
0.87
%
—
8
63
108
1042
1.06
0.16
5.9
6.0
—
—
—
0
0
58
550
1.07
0.14
3.2
2.6
0.10
0.35
e6/l
3.39
45
409
16
141
1.14
0.14
2.1
2.6
73.70
75.31
e9/l
—
10
102
78
748
1.06
0.14
1.7
1.9
91.94
94.64
pmol/l
0.25
45
398
59
562
1.06
0.13
3.2
2.5
—
—
—
0
0
57
546
1.06
0.10
3.2
2.5
—
—
—
0
0
5
46
1.09
0.09
1.0
1.4
—
—
—
0
0
74
716
1.05
0.09
3.2
3.2
8.68
130.55
e6/l
1.56
51
491
17
186
0.91
0.09
1.6
1.4
—
—
—
0
0
26
278
0.93
0.09
1.3
1.2
—
—
—
0
0
96
935
1.04
0.09
2.2
2.5
—
—
—
0
0
17
155
1.10
0.09
1.2
1.3
39.11
24.97
iu/l
0.91
17
134
6
57
1.05
0.08
9.5
5.8
1.18
1.17
mmol/l
—
6
49
7
66
1.06
0.08
5.6
5.5
1.73
1.56
%
—
7
60
93
909
1.04
0.07
1.9
2.0
—
—
—
0
0
61
592
1.04
0.07
1.7
2.1
133.91
208.70
u/l
1.24
54
566
9
102
0.88
0.06
1.8
3.0
0.29
0.13
e6/l
—
9
97
17
182
0.93
0.06
1.1
1.2
84.00
122.95
iu/ml
—
9
78
66
646
1.03
0.04
2.5
3.5
2.35
2.35
mmol/l
0.16
59
574
59
603
0.97
0.04
1.5
1.5
—
—
—
0
0
12
129
0.93
0.03
1.0
1.1
—
—
—
0
0
37
360
1.03
0.03
3.5
3.6
1644.86
191.32
ng/l
0.67
22
253
57
578
0.98
0.01
2.8
3.7
7.41
7.40
ph
0.59
12
108
19
183
1.04
0.01
1.2
1.6
—
—
—
0
0
16
159
1.01
0.00
1.2
2.4
11.51
14.32
nmol/l
1.14
16
149
85
854
0.99
0.00
25.3
9.7
1.30
1.16
inr
0.75
36
252
60
601
1.00
0.00
2.9
2.7
35.78
166.20
e6/l
0.62
45
460
119
1186
1.01
0.00
3.9
4.4
6.37
6.55
mmol/l
0.48
112
1109
29
294
0.98
0.00
1.3
1.7
—
—
—
0
0
16
165
0.97
0.00
1.8
3.5
2.27
2.04
mmol/l
0.19
16
129
20
195
1.03
0.00
1.1
1.2
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
2.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.2
—
1.42
—
0
6
0
7
0.00
-0.00
0.0
4.9
—
—
—
0
0
16
160
1.00
-0.00
1.3
1.8
—
—
—
0
0
8
83
0.96
-0.00
2.5
4.1
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
0.06
—
0
5
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
7
0.00
-0.00
0.0
3.6
—
54.93
—
0
7
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.8
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
6.17
—
0
5
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
-0.00
0.0
1.4
—
—
—
0
0
6
67
0.89
-0.00
1.7
1.3
—
4.01
—
0
9
0
6
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.6
—
15.28
—
0
5
0
5
0.00
-0.00
0.0
1.2
—
—
—
0
0
0
7
0.00
-0.00
0.0
3.9
—
7.53
—
0
7

Mortality – FinRegistry

This endpoint is excluded (different definition than used in FinnGen).

Relationships between endpoints

Index endpoint: AB1_OTHER_MOSQUITO_FEVER_WIDE – Other mosquito-borne viral fevers

GWS hits: 1

This endpoint is excluded (different definition than used in FinnGen).