Other congenital malformations of intestine

Q17_OTHER_CONGEN_MALFO_INTESTINE

Endpoint definition

Report an error or suggest an improvement for this endpoint codes

Endpoint definition steps

FinnGen

Phenotype data

520210

1. Apply sex-specific rule

None

520210

2. Check conditions

None

520210

3. Check pre-conditions, main-only, mode, registry filters

Registry filters:

  • Hospital discharge: ICD-10 Q43
  • Cause of death: ICD-10 Q43

2 out of 7 registries used, show all original rules.

314

4. Check minimum number of events

None

314

5. Include endpoints

None

314

6. Filter based on genotype QC (FinnGen only)

314

Control definitions (FinnGen only)

Control exclude
Q17_OTHER_CONGEN_MALFO_DIGES_SYSTEM1

Extra metadata

Level in the ICD hierarchy
3
First used in FinnGen datafreeze
DF4
Parent code in ICD-10
Q3[8-9]|Q4[0-5]
Name in latin
Aliae malformationes congenitae intestini

Case counts by codes

FinnGen case counts by registry codes:

generic upset plot

Upset plot

Full data table

Summary Statistics

-FinRegistry-

Key figures

All Female Male
Number of individuals
Whole population 3727 1773 1940
Only index persons 3073 1448 1625
Unadjusted period prevalence (%)
Whole population 0.05 0.05 0.05
Only index persons 0.06 0.05 0.06
Median age at first event (years)
Whole population 16.48 14.08 18.30
Only index persons 23.09 22.17 23.91

-FinnGen-

Key figures

All Female Male
Number of individuals 314 163 151
Unadjusted period prevalence (%) 0.06 0.06 0.07
Median age at first event (years) 45.77 44.18 47.49

-FinRegistry-

Age distribution of first events

01020304050607080900.0k0.2k0.4k0.6k0.8k1.0k1.2k1.4k1.6kAgeIndividuals

-FinnGen-

Age distribution of first events

0102030405060708090051015202530354045505560AgeIndividuals

-FinRegistry-

Year distribution of first events

197019751980198519902000200520102015202020220100200300400500600700YearIndividuals

-FinnGen-

Year distribution of first events

19701975198019851990200020052010201520202023051015202530354045505560YearIndividuals

-FinRegistry-

Cumulative Incidence Function

01020304050607080901000.00.10.20.30.40.50.60.70.80.91.0AgeProbability of first incidence (%)

-FinnGen-

Cumulative Incidence Function

No data

CodeWAS (R11)

CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.

This is a new tool, please reach out using the contact form for feedback and improvement ideas.

First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.

Matched cohort

Matched cases
283
Matched controls
2828
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
Q43.0
ICD-10 Finland
Meckel diverticulum
+∞
172.0
147
*
Q43.8
ICD-10 Finland
Other specified congenital malformations of intestine
+∞
48.3
45
*
Q43.1
ICD-10 Finland
Hirschsprung disease
+∞
40.6
38
*
JFB00
NOMESCO Finland
Partial resection of small intestine
98.3
39.0
42
5
JFA73
NOMESCO Finland
Excision of lesion of small intestine
225.2
38.9
39
*
JEA00
NOMESCO Finland
Appendectomy
8.4
24.8
57
82
JN3AA
NOMESCO Finland
Abdominal X-ray examination without contrast
10.5
24.5
49
55
R10.4
ICD-10 Finland
Other and unspecified abdominal pain
3.7
23.2
147
642
K56.6
ICD-10 Finland
Other and unspecified intestinal obstruction
15.7
19.1
31
22
Q43.5
ICD-10 Finland
Ectopic anus
+∞
19.0
18
*
UJF32
NOMESCO Finland
Coloscopy
3.4
17.0
100
387
JAH00
NOMESCO Finland
Laparotomy
12.8
17.0
30
26
WX408
NOMESCO Finland
General anesthesy, balanced
3.1
16.3
116
515
UJD10
NOMESCO Finland
Esophagoscopy, gastroscopy and duodenoscopy
3.2
16.1
103
424
P01AB01
ATC
metronidazole; oral, rectal
2.9
15.7
132
652
K56.5
ICD-10 Finland
Intestinal adhesions [bands] with obstruction
22.6
14.9
21
10
JF1AB
NOMESCO Finland
Passage examination of small bowell with X-ray
14.4
14.5
24
18
TJF80
NOMESCO Finland
Ostomy education
20.5
14.5
21
11
JN3BD
NOMESCO Finland
Extensive abdominal CT
4.5
13.9
52
135
Q43.30
ICD-10 Finland
Template rotation of colon
+∞
13.6
13
*
K57.3
ICD-10 Finland
Diverticular disease of large intestine without perforation or abscess
3.6
13.1
65
217
WX404
NOMESCO Finland
Intravenous generell anesthesy
2.9
12.1
90
396
Q43.9
ICD-10 Finland
Congenital malformation of intestine, unspecified
+∞
11.5
11
*
K57.2
ICD-10 Finland
Diverticular disease of large intestine with perforation and abscess
13.6
10.8
18
14
TPH07
NOMESCO Finland
Cathetrisation of artery
3.5
10.5
52
172
JAH01
NOMESCO Finland
Laparoscopy
6.4
10.4
27
46
JN3AE
NOMESCO Finland
Abdominal ultrasound examination
3.1
10.4
63
242
A09
ICD-10 Finland
Other gastroenteritis and colitis of infectious and unspecified origin
2.8
10.0
73
315
A06AC01
ATC
ispaghula (psylla seeds); oral
2.7
9.7
75
332
K56.2
ICD-10 Finland
Volvulus
31.2
9.5
12
*
Q43.2
ICD-10 Finland
Other congenital functional disorders of colon
+∞
9.4
9
*
Q42.2
ICD-10 Finland
Congenital absence, atresia and stenosis of anus with fistula
+∞
9.4
9
*
TPH04
NOMESCO Finland
Cathetrisation of vein
2.6
9.2
73
329
J01MA02
ATC
ciprofloxacin; systemic
2.3
8.9
109
612
WX302
NOMESCO Finland
Thoracal epidural anesthesy
4.8
8.6
28
63
K59.09
ICD-10 Finland
Constipation, unspecified
4.9
8.4
27
60
Q42.0
ICD-10 Finland
Congenital absence, atresia and stenosis of rectum with fistula
+∞
8.4
8
*
7513A
ICD-9 Finland
Other congenital anomalies of digestive system, Hirschsprung's disease and other congenital functional disorders of colon[MORBUS HIRSCHPRUNG]
+∞
8.4
8
*
R10.3
ICD-10 Finland
Pain localized to other parts of lower abdomen
2.5
8.2
72
342
WX700
NOMESCO Finland
Respiratory and circulatory monitoring
2.7
8.0
58
246
UJD02
NOMESCO Finland
Gastroscopy
5.6
7.9
22
42
WX002
NOMESCO Finland
Sedation and analgesia
2.5
7.8
65
299
GD1AA
NOMESCO Finland
Thorax X-ray examination
2.0
7.5
125
789
JGB20
NOMESCO Finland
Partial rectosigmoidectomy and abdominoperineal pull-through anastomosis
82.2
7.5
8
*
TJD20
NOMESCO Finland
Change of gastrostomy tube
13.9
7.5
12
9
K59.0
ICD-10 Finland
Constipation
4.5
7.4
25
59
TPH15
NOMESCO Finland
Insertion of central venous catheter through external or internal jugular vein
3.4
7.4
35
112
Q42.3
ICD-10 Finland
Congenital absence, atresia and stenosis of anus without fistula
+∞
7.3
7
*
JFA74
NOMESCO Finland
Laparoscopic excision of lesion of small intestine
+∞
7.3
7
*
K57.1
ICD-10 Finland
Diverticular disease of small intestine without perforation or abscess
16.3
7.3
11
7
JHW96
NOMESCO Finland
Other operation on anus or perianal tissue
30.9
7.2
9
*
JFG40
NOMESCO Finland
Revision of enterostomy or colostomy without laparotomy
30.9
7.2
9
*
K35.9
ICD-10 Finland
Acute appendicitis, unspecified
3.3
7.2
35
115
GD1UA
NOMESCO Finland
Thorax X-ray examination outside radiological department
2.5
6.7
56
255
K92.1
ICD-10 Finland
Melaena
4.1
6.5
24
63
JDB00
NOMESCO Finland
Gastrostomy
71.4
6.5
7
*
JF2AB
NOMESCO Finland
Colongraphy with X-ray
18.5
6.3
9
5
K57.0
ICD-10 Finland
Diverticular disease of small intestine with perforation and abscess
+∞
6.3
6
*
6504
FHL
Reconstruction
+∞
6.3
6
*
Q87.26
ICD-10 Finland
VATER association
+∞
6.3
6
*
Y83
ICD-10 Finland
Surgical operation and other surgical procedures as the cause of abnormal reaction of the patient, or of later complication, without mention of misadventure at the time of the procedure
3.6
6.1
26
77
K65.0
ICD-10 Finland
Acute peritonitis
12.9
6.1
10
8
WX882
NOMESCO Finland
High dependency care
3.5
6.1
27
83
NA7CG
NOMESCO Finland
Spine and spinal cord extensive MRI examination with high intensity magnet
10.3
6.1
11
11

LabWAS

OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
197
1211
2.68
15.80
9.4
6.3
12.25
12.99
umol/l
0.17
184
1151
170
981
2.60
15.42
9.5
5.2
35.59
36.26
g/l
0.83
160
920
114
589
2.47
12.51
7.8
4.0
—
—
—
0
0
243
1830
2.45
10.18
12.0
6.8
90.06
84.38
u/l
0.83
233
1711
14
21
6.93
8.97
8.9
2.1
49.21
27.38
mmol/l
1.67
14
21
13
18
7.49
8.91
10.5
1.6
24.31
30.33
umol/l
1.05
13
18
94
507
2.22
8.89
4.1
2.4
6.37
4.77
e6/l
0.39
86
440
78
391
2.32
8.77
3.7
2.6
207.21
103.01
ug/g
0.51
64
309
111
643
2.12
8.73
11.7
4.4
88.43
90.23
%
0.34
104
635
123
747
2.06
8.49
4.4
2.3
—
—
—
0
0
116
701
2.04
8.03
5.0
3.2
0.28
0.32
e6/l
0.13
98
520
79
416
2.20
7.82
3.9
3.1
3.97
2.23
e6/l
0.45
47
234
113
686
2.01
7.66
4.9
3.1
—
—
—
0
0
122
766
1.97
7.47
5.4
3.2
80.70
36.08
e6/l
0.50
104
588
169
1188
1.92
7.35
15.0
7.7
1.21
1.22
mmol/l
0.19
146
1029
49
215
2.52
7.32
17.5
9.7
1.32
1.34
mmol/l
0.05
49
202
119
748
1.95
7.22
3.3
3.2
2.38
2.36
mmol/l
0.58
110
661
10
13
7.91
7.16
1.7
1.5
—
—
—
0
0
87
491
2.07
7.14
3.7
2.8
557.03
570.52
mosm/kgh2o
0.20
77
414
58
279
2.32
7.08
23.2
9.2
—
—
—
0
0
218
1679
1.98
7.08
5.4
4.0
—
—
—
0
0
158
1098
1.88
7.01
18.2
7.6
1.21
1.22
mmol/l
0.52
143
1013
58
281
2.31
6.96
1.5
1.2
—
—
—
0
0
63
318
2.23
6.85
2.7
2.3
—
—
—
0
0
203
1537
1.91
6.81
13.1
9.4
4.43
4.02
e9/l
1.28
179
1330
61
305
2.24
6.78
16.7
6.0
1.87
1.42
mmol/l
0.54
48
232
70
372
2.13
6.69
10.0
4.7
0.81
0.82
mmol/l
0.44
65
349
133
886
1.87
6.64
6.1
3.8
55.25
87.38
e6/l
0.38
108
621
61
309
2.21
6.56
16.9
6.0
5.83
5.76
kpa
0.27
61
299
135
920
1.82
6.15
10.2
6.6
—
—
—
0
0
129
867
1.83
6.15
2.8
1.9
—
—
—
0
0
54
267
2.23
6.15
1.6
1.3
—
—
—
0
0
156
1112
1.80
6.11
5.7
4.1
—
—
—
0
0
32
126
2.71
5.92
1.7
1.2
—
—
—
0
0
11
20
5.66
5.85
8.3
1.4
26.20
19.40
umol/l
0.29
11
20
44
204
2.35
5.81
11.8
5.3
—
—
—
0
0
52
259
2.21
5.81
1.4
1.2
—
—
—
0
0
103
669
1.80
5.36
8.3
3.5
7.41
7.40
ph
0.54
16
112
121
830
1.74
5.19
2.6
1.9
97.57
94.23
pmol/l
0.33
68
426
286
2539
2.42
4.96
28.6
14.3
139.30
139.66
mmol/l
1.72
277
2469
73
436
1.88
4.92
4.7
3.7
458.91
394.94
ng/l
0.08
50
321
286
2545
2.39
4.83
28.7
14.3
3.97
3.97
mmol/l
0.12
278
2467
98
644
1.76
4.83
3.7
2.8
—
—
—
0
0
11
24
4.71
4.82
2.1
2.7
—
—
—
0
0
184
1442
1.67
4.63
10.9
5.4
6.33
6.57
mmol/l
1.11
174
1341
86
556
1.75
4.44
3.9
3.1
—
—
—
0
0
51
280
1.98
4.39
17.7
5.7
5.55
4.69
kpa
1.81
51
270
7
6
11.89
4.29
4.0
1.2
15.16
15.85
umol/l
—
7
6
27
116
2.45
4.22
9.6
16.1
—
—
—
0
0
62
370
1.84
4.16
3.1
3.0
2.44
2.44
mmol/l
0.04
55
324
101
695
1.67
4.12
11.3
6.8
—
—
—
0
0
285
2569
2.18
4.04
24.3
12.5
30.01
22.60
mg/l
2.82
250
1947
41
215
2.04
4.00
4.4
4.3
2.90
7.93
ug/l
2.03
30
173
39
204
2.04
3.84
1.6
1.4
—
—
—
0
0
7
8
8.91
3.79
3.4
3.5
—
—
—
0
0
6
5
12.19
3.78
7.2
1.8
1.17
1.27
umol/l
—
6
5
163
1281
1.57
3.75
11.5
6.5
2.76
2.91
%
0.40
158
1209
143
1091
1.57
3.74
4.4
2.7
101.36
104.49
ug/l
0.07
134
1007
16
56
2.96
3.68
23.3
9.2
—
—
—
0
0
11
30
3.76
3.67
2.2
2.9
—
—
—
0
0
173
1383
1.56
3.65
10.9
6.5
2.13
2.06
e9/l
0.23
154
1210
168
1346
1.53
3.43
11.0
6.4
0.64
0.58
e9/l
1.61
152
1151
152
1192
1.53
3.43
5.3
4.6
0.00
0.00
estimate
0.00
29
210
168
1352
1.52
3.33
11.0
6.4
0.04
0.04
e9/l
0.39
151
1159
151
1190
1.52
3.29
4.2
3.2
0.00
0.00
estimate
0.00
29
208
201
1686
1.53
3.24
7.0
3.2
46.49
43.66
u/l
0.16
189
1601
14
49
2.94
3.23
34.8
9.2
81.04
63.93
%
2.25
14
49
43
249
1.84
3.16
17.7
7.6
6.52
7.83
mmol/l
1.10
43
244
41
236
1.85
3.07
9.0
11.2
-0.42
1.08
mmol/l
1.29
35
194
151
1203
1.49
3.05
4.2
3.2
0.00
0.00
estimate
0.00
30
198
76
522
1.60
3.02
3.0
2.3
0.90
1.12
mg/l
0.50
62
398
214
1833
1.53
3.02
5.2
3.9
12.24
10.52
mm/h
0.92
205
1697
170
1392
1.48
2.97
11.4
6.8
0.20
0.20
e9/l
0.04
154
1214
46
279
1.76
2.91
1.5
1.5
—
—
—
0
0
113
858
1.50
2.85
10.3
7.2
1.23
1.19
inr
0.16
32
264
16
65
2.54
2.84
2.3
1.7
—
—
—
0
0
53
338
1.68
2.81
1.8
1.5
—
—
—
0
0
48
298
1.72
2.81
2.1
1.6
—
—
—
0
0
288
2669
1.95
2.79
19.5
11.2
—
—
—
0
0
5
6
8.44
2.76
6.0
2.2
—
—
—
0
0
150
1212
1.45
2.73
15.0
9.4
0.00
0.00
e9/l
0.37
124
966
85
615
1.52
2.67
3.0
3.6
—
—
—
0
0
18
81
2.30
2.59
3.1
3.0
—
—
—
0
0
9
27
3.40
2.41
1.3
1.3
—
—
—
0
0
5
8
6.33
2.38
2.4
3.5
116.40
223.88
ug/g
—
5
8
8
24
3.39
2.19
1.9
1.1
—
—
—
0
0
8
24
3.39
2.19
1.3
1.3
—
—
—
0
0
52
352
1.57
2.19
2.0
1.7
1207.88
1168.81
nmol/l
0.10
34
257
19
95
2.06
2.15
1.2
1.2
—
—
—
0
0
56
387
1.54
2.15
4.4
3.0
29.68
29.84
s
0.09
56
381
58
404
1.53
2.15
1.8
1.7
415.24
449.61
pmol/l
0.61
50
338
284
2657
1.72
2.14
17.0
9.5
28.34
27.12
u/l
0.30
276
2559
63
451
1.50
2.06
1.9
1.6
—
—
—
0
0
20
104
1.99
2.05
3.8
2.5
28008.78
4365.61
u/l
—
9
35
6
15
4.06
2.05
2.3
1.6
0.91
1.07
g/l
—
6
15
15
71
2.17
1.95
2.0
1.6
269.00
196.40
u/ml
—
7
40
213
1895
1.39
1.95
4.6
3.7
14.85
14.62
pmol/l
0.68
200
1714
13
58
2.29
1.93
1.3
1.5
—
—
—
0
0
37
239
1.62
1.89
17.5
20.8
1.25
1.32
inr
—
8
35
42
282
1.56
1.84
3.3
3.9
1.53
1.62
%
0.31
37
260
17
89
1.96
1.73
1.5
1.2
—
—
—
0
0
19
105
1.86
1.67
2.9
2.3
—
—
—
0
0
71
542
1.40
1.66
5.3
3.2
1.02
1.02
kg/l
—
8
75
85
670
1.37
1.64
1.4
1.5
2.13
2.05
g/l
0.19
50
376
10
43
2.37
1.62
2.7
3.7
60.90
57.23
%
—
10
43
10
43
2.37
1.62
2.7
3.7
4.66
4.43
e9/l
—
10
43
14
70
2.05
1.62
1.3
1.3
352.22
303.34
ug/g
—
9
39
6
20
3.04
1.59
1.5
1.3
—
—
—
0
0
19
107
1.83
1.58
1.8
2.8
—
—
—
0
0
27
169
1.65
1.58
5.3
3.4
—
—
—
0
0
29
185
1.63
1.58
2.3
1.4
—
—
—
0
0
20
115
1.79
1.56
1.4
2.5
—
—
—
0
0
18
100
1.85
1.56
1.2
1.1
—
—
—
0
0
5
15
3.37
1.53
1.2
1.0
—
—
—
0
0
5
15
3.37
1.53
1.2
1.2
—
—
—
0
0
7
27
2.63
1.52
1.7
1.3
—
—
—
0
0
244
2255
1.37
1.51
29.2
15.5
13.78
13.50
%
2.10
239
2219
177
1565
1.30
1.50
3.5
3.5
—
—
—
0
0
7
28
2.53
1.46
1.6
14.8
12.49
12.23
%
—
7
28
5
16
3.16
1.44
4.0
12.5
23.66
159.82
g/mol
—
5
11
26
166
1.62
1.42
4.3
4.8
0.11
0.18
%
—
9
44
76
602
1.35
1.41
5.2
3.4
0.00
0.00
estimate
0.50
28
205
7
29
2.45
1.40
3.4
2.6
—
—
—
0
0
9
41
2.23
1.38
1.2
1.7
—
—
—
0
0
9
41
2.23
1.38
1.2
1.7
—
—
—
0
0
9
41
2.23
1.38
1.2
1.7
—
—
—
0
0
9
41
2.23
1.38
1.2
1.7
—
—
—
0
0
5
17
2.97
1.36
1.2
1.5
—
—
—
0
0
27
178
1.57
1.31
4.9
2.7
4.26
3.80
e9/l
0.34
21
150
8
36
2.25
1.25
6.1
5.0
—
—
—
0
0
260
2449
1.36
1.24
27.3
14.0
39.67
40.19
%
0.55
205
1910
46
345
1.39
1.20
1.5
1.4
605.71
655.87
titre
—
7
63
8
38
2.13
1.19
1.0
1.0
—
—
—
0
0
70
562
1.32
1.19
2.2
1.9
—
—
—
0
0
27
183
1.52
1.18
4.2
4.5
1.72
0.91
%
—
9
53
5
20
2.52
1.15
1.2
1.5
—
—
—
0
0
8
40
2.03
1.13
2.0
2.8
0.22
0.19
e9/l
—
8
31
7
31
2.29
1.11
1.0
1.2
—
—
—
0
0
5
21
2.40
1.09
1.6
1.8
—
1858.00
—
0
5
7
32
2.21
1.08
1.0
1.0
—
—
—
0
0
86
724
1.26
1.01
3.8
3.6
7.91
7.95
mmol/l
0.03
75
610
20
132
1.55
1.00
1.9
1.5
—
—
—
0
0
23
157
1.50
0.99
15.7
3.4
1.24
1.22
mmol/l
0.41
17
135
29
209
1.43
0.96
2.3
3.4
66.89
69.63
e9/l
0.16
21
153
26
184
1.45
0.95
6.4
5.3
—
—
—
0
0
6
28
2.16
0.92
2.2
1.4
403.17
732.17
pmol/l
—
6
23
6
29
2.09
0.90
1.7
1.3
89.90
421.03
mu/l
—
6
24
13
79
1.67
0.89
1.0
1.3
—
—
—
0
0
27
196
1.41
0.87
3.9
3.2
—
—
—
0
0
20
284
0.68
0.87
1.2
1.4
—
—
—
0
0
6
114
0.52
0.84
1.2
1.1
—
—
—
0
0
12
73
1.67
0.83
2.3
2.6
—
—
—
0
0
225
2120
1.22
0.82
5.8
5.4
38.42
39.46
mmol/mol
0.98
214
1981
68
573
1.24
0.80
6.7
4.4
—
—
—
0
0
46
372
1.28
0.76
1.2
1.3
16.86
7.72
u/ml
0.54
17
135
84
728
1.21
0.75
1.6
1.5
—
—
—
0
0
7
38
1.86
0.74
1.1
1.2
—
—
—
0
0
94
826
1.20
0.73
3.5
3.4
25.80
38.03
ng/l
0.68
59
532
9
56
1.62
0.73
1.3
1.2
—
—
—
0
0
5
25
2.02
0.73
7.8
13.0
1157.20
1436.28
nmol/l
—
5
25
7
39
1.81
0.73
1.1
1.1
—
—
—
0
0
18
126
1.45
0.72
1.9
2.1
—
—
—
0
0
9
145
0.61
0.71
3.6
2.2
—
—
—
0
0
240
2290
1.20
0.69
5.4
4.3
1.76
1.89
mu/l
1.28
228
2090
7
42
1.68
0.69
2.1
2.8
620.29
553.58
e6/l
—
7
31
5
27
1.87
0.68
1.2
2.4
33.40
32.59
pg
—
5
27
5
28
1.80
0.66
3.8
2.9
26.32
19.40
ug/l
—
5
28
10
62
1.63
0.66
1.2
1.1
—
—
—
0
0
37
298
1.27
0.64
1.2
1.2
—
—
—
0
0
5
30
1.68
0.61
2.2
1.1
—
—
—
0
0
0
21
0.00
0.60
0.0
1.0
—
—
—
0
0
231
2208
1.17
0.59
4.2
3.7
1.31
1.27
mmol/l
0.28
220
2043
13
89
1.48
0.59
3.1
1.6
—
—
—
0
0
13
89
1.48
0.59
1.2
1.1
—
—
—
0
0
0
23
0.00
0.58
0.0
1.3
—
4.19
—
0
5
83
739
1.17
0.55
1.4
1.5
3.68
1.39
u/ml
0.60
25
178
7
47
1.50
0.48
1.0
1.1
—
—
—
0
0
5
31
1.62
0.43
2.4
1.3
—
—
—
0
0
20
158
1.28
0.43
4.9
4.8
0.20
0.21
%
—
5
39
8
57
1.41
0.42
1.3
2.7
37.49
150.25
mg/l
—
8
45
8
57
1.41
0.42
1.3
2.7
29.26
30.14
mg/l
—
8
45
5
34
1.48
0.40
2.4
1.3
0.46
0.47
nmol/l
—
5
29
19
151
1.27
0.39
1.9
2.0
—
—
—
0
0
5
37
1.36
0.37
1.4
1.1
—
—
—
0
0
20
162
1.25
0.36
1.8
1.9
—
—
—
0
0
44
387
1.16
0.36
2.5
2.8
0.57
0.83
ug/l
1.83
30
245
6
42
1.44
0.35
1.5
1.2
—
—
—
0
0
74
676
1.12
0.35
4.5
4.8
2.00
2.16
ug/l
0.14
66
596
6
43
1.40
0.35
10.5
2.2
—
—
—
0
0
20
163
1.24
0.35
1.8
1.9
—
—
—
0
0
6
45
1.34
0.34
12.3
2.4
—
—
—
0
0
20
164
1.23
0.33
1.8
1.9
—
—
—
0
0
26
220
1.20
0.33
1.8
1.5
—
—
—
0
0
45
400
1.15
0.32
1.3
1.3
50.32
27.67
iu/ml
0.26
11
126
6
47
1.28
0.32
2.7
1.7
—
—
—
0
0
68
627
1.11
0.28
4.0
4.1
2.63
10.29
mg/mmol
3.30
44
406
69
637
1.11
0.28
2.1
1.7
1.32
1.40
mmol/l
0.39
62
542
27
235
1.16
0.26
2.0
1.8
—
—
—
0
0
9
74
1.22
0.25
1.1
1.3
—
—
—
0
0
62
574
1.10
0.24
3.8
3.0
338.60
6294.24
umol/l
2.20
55
498
19
162
1.18
0.23
1.9
1.7
—
—
—
0
0
72
673
1.09
0.23
3.5
2.9
—
—
—
0
0
5
38
1.32
0.23
1.0
1.5
—
—
—
0
0
239
2341
1.09
0.23
4.9
4.5
2.65
2.76
mmol/l
1.20
228
2176
236
2312
1.08
0.22
4.6
4.1
4.43
4.62
mmol/l
2.09
226
2155
37
407
0.90
0.21
1.5
1.6
—
—
—
0
0
0
11
0.00
0.21
0.0
1.5
—
—
—
0
0
0
11
0.00
0.21
0.0
7.4
—
—
—
0
0
0
11
0.00
0.21
0.0
2.2
—
—
—
0
0
0
11
0.00
0.21
0.0
1.2
—
—
—
0
0
0
10
0.00
0.21
0.0
1.3
—
8.19
—
0
10
0
10
0.00
0.21
0.0
16.4
—
0.47
—
0
10
6
48
1.25
0.20
3.8
2.2
—
—
—
0
0
234
2297
1.07
0.19
4.3
4.1
1.36
1.44
mmol/l
2.53
225
2129
11
91
1.22
0.18
1.8
1.6
—
—
—
0
0
20
178
1.13
0.15
1.1
1.2
51.64
151.34
iu/ml
—
8
66
16
140
1.15
0.15
2.9
7.7
—
—
—
0
0
63
598
1.07
0.14
3.8
3.3
33.82
282.81
mg/l
1.01
42
403
10
85
1.18
0.12
16.1
7.7
—
—
—
0
0
5
44
1.14
0.10
2.6
3.2
—
—
—
0
0
14
155
0.90
0.09
1.1
1.2
—
—
—
0
0
6
55
1.09
0.09
1.0
1.1
—
—
—
0
0
6
56
1.07
0.08
1.0
1.1
—
—
—
0
0
10
88
1.14
0.08
33.7
5.1
—
—
—
0
0
6
70
0.85
0.07
1.5
2.8
—
—
—
0
0
8
75
1.07
0.07
1.8
2.6
—
—
—
0
0
10
112
0.89
0.07
2.5
3.4
—
—
—
0
0
14
129
1.09
0.05
7.3
2.4
0.11
0.14
e6/l
0.12
14
121
16
169
0.94
0.03
1.2
1.5
—
—
—
0
0
85
860
0.98
0.02
2.9
2.6
—
—
—
0
0
15
156
0.96
0.00
1.4
1.4
—
—
—
0
0
225
2249
1.00
0.00
4.6
4.1
5.82
5.88
mmol/l
0.32
209
2061
12
125
0.96
0.00
1.8
1.8
—
—
—
0
0
31
305
1.02
0.00
1.7
1.7
—
—
—
0
0
0
9
0.00
0.00
0.0
1.0
—
—
—
0
0
0
9
0.00
0.00
0.0
1.3
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
9
0.00
0.00
0.0
2.7
—
—
—
0
0
7
77
0.91
0.00
1.9
2.7
5642.86
199.95
e6/l
—
7
60
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
0
5
0.00
0.00
0.0
9.4
—
25.46
—
0
5
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
7
0.00
0.00
0.0
1.4
—
96.71
—
0
7
0
8
0.00
0.00
0.0
1.3
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
0.00
0.0
1.0
—
18.70
—
0
5
0
7
0.00
0.00
0.0
1.1
—
—
—
0
0
6
66
0.91
0.00
1.0
1.2
—
—
—
0
0
7
77
0.91
0.00
1.9
2.6
66.57
2.75
e6/l
—
7
57
0
5
0.00
0.00
0.0
1.8
—
—
—
0
0

Mortality – FinRegistry

Association

Association between endpoint Q17_OTHER_CONGEN_MALFO_INTESTINE and mortality.

Females

Parameter HR [95% CI] p-value
Q17_OTHER_CONGEN_MALFO_INTESTINE 1.262 [1.0, 1.59] 0.047
Birth year 0.992 [0.98, 1.0] 0.057

During the follow-up period (1.1.1998 — 31.12.2019), 156 out of 1498 females with Q17_OTHER_CONGEN_MALFO_INTESTINE died.

Males

Parameter HR [95% CI] p-value
Q17_OTHER_CONGEN_MALFO_INTESTINE 1.574 [1.26, 1.97] < 0.001
Birth year 0.99 [0.98, 1.0] 0.035

During the follow-up period (1.1.1998 — 31.12.2019), 193 out of 1619 males with Q17_OTHER_CONGEN_MALFO_INTESTINE died.

Mortality risk

Mortality risk for people of age

years, who have Q17_OTHER_CONGEN_MALFO_INTESTINE.

N-year risk Females Males
1 0.114% 0.398%
5 0.63% 2.107%
10 1.673% 5.054%
15 3.275% 9.363%
20 5.698% 15.628%

Relationships between endpoints

Index endpoint: Q17_OTHER_CONGEN_MALFO_INTESTINE – Other congenital malformations of intestine

GWS hits: -

Endpoint
Case Overlap
Survival Analysis
Genetic Correlations
Genetic Signals
N (Jaccard index)
HR [CI]
rg [CI]
Hits
Coloc Hits
FinRegistry
FinnGen
FinRegistry
FinnGen
FinnGen
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