This is a non-core endpoint: only basic statistics are computed.
See these related core endpoints for full statistics:
Diseases caused by chlamydiae
AB1_CHLAMY_OTHER
No definition available.
Endpoint definition
↥Report an error or suggest an improvement for this endpoint codes
Endpoint definition steps |
FinnGen |
|---|---|
Phenotype data |
519972 |
1. Apply sex-specific ruleNone |
519972 |
2. Check conditionsNone |
519972 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
2 out of 7 registries used, show all original rules. |
409 |
4. Check minimum number of eventsNone |
409 |
5. Include endpointsNone |
409 |
6. Filter based on genotype QC (FinnGen only) |
395 |
Control definitions (FinnGen only)
- Control exclude
- AB1_OTHER_CHLAMYDIAE
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF12
Similar endpoints
↥List of similar endpoints to
Diseases caused by chlamydiae
based on the number of shared cases.
Similar with more cases:
- Other diseases caused by chlamydiae
- Diseases caused by chlamydiae
- Other diseases caused by chlamydiae
- Certain infectious and parasitic diseases
- Certain infectious and parasitic diseases
Similar with less cases:
None
Case counts by codes
↥
Summary Statistics
↥-FinRegistry-
This endpoint is excluded (different definition than used in FinnGen).
-FinnGen-
Key figures
| All | Female | Male | |
|---|---|---|---|
| Number of individuals | 395 | 347 | 48 |
| Unadjusted period prevalence (%) | 0.11 | 0.12 | 0.02 |
| Median age at first event (years) | 24.53 | 22.68 | 37.89 |
-FinnGen-
Age distribution of first events
-FinnGen-
Year distribution of first events
-FinnGen-
Cumulative Incidence Function
Not a core endpoint, no data to show.
CodeWAS
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 409
- Matched controls
- 4090
Code
Vocabulary
Description
Odds Ratio
-log10(p)
N matched cases
N matched controls
0769C
ICD-9 Finland
Trachoma, unspecified[CHLAMYDIA ENDOMETRITIS ET SALPINGO-OOPHORITIS]
+∞
217.8
189
*
0769X
ICD-9 Finland
Trachoma, unspecified[CHLAMYDIA ALIA DEFINITA SEU NUD]
+∞
93.4
86
*
6350C
ICD-9 Finland
Legally induced abortion, Complicated by genital tract and pelvic infection[ABORTUS PROV LEGAL SINE COMPL,SOSIAALISET SYYT]
6.9
62.6
117
223
8513
FHL
Softening of cervix with abortifacient or laminars and associated surgical emptying of the uterus
8.3
47.7
69
98
H13.1*A74.0
ICD-10 Finland
Chlamydial conjunctivitis
+∞
40.3
38
*
0769A
ICD-9 Finland
Trachoma, unspecified[CHLAMYDIA URETHRITIS]
+∞
32.7
31
*
A74.9
ICD-10 Finland
Chlamydial infection, unspecified
+∞
31.7
30
*
6140A
ICD-9 Finland
Inflammatory disease of ovary, Fallopian tube, pelvic cellular tissue and peritoneum, Acute salpingitis and oophoritis[S-O-ITIS ACUTA]
11.9
28.8
30
27
8511
FHL
Cervical dilation and drainage with suction
4.8
22.6
56
132
0769D
ICD-9 Finland
Trachoma, unspecified[CHLAMYDIA PERIHEPATITIS]
+∞
18.9
18
*
7890A
ICD-9 Finland
Other symptoms involving abdomen and pelvis, Abdominal pain
3.5
12.9
48
151
EBA05
NOMESCO Finland
Complicated extraction of tooth
2.0
8.4
109
623
6421
FHL
Appendicectomy
3.0
8.4
38
135
N02AX02
ATC
tramadol; systemic, rectal
1.9
8.3
174
1168
O04.9
ICD-10 Finland
Medical abortion, complete or unspecified, without complication
2.4
8.2
60
273
R10.3
ICD-10 Finland
Pain localized to other parts of lower abdomen
1.9
7.9
134
838
Z04.9
ICD-10 Finland
Examination and observation for unspecified reason
3.7
7.5
24
68
A74.0
ICD-10 Finland
Chlamydial conjunctivitis
+∞
7.3
7
*
8113
FHL
Fractional scraping
3.7
7.2
23
65
0981A
ICD-9 Finland
Gonococcal infections, Acute, of upper genito-urinary tract
30.6
7.2
9
*
F10.1
ICD-10 Finland
Mental and behavioural disorders due to use of alcohol, Harmful use
3.0
7.1
31
108
P01AB01
ATC
metronidazole; oral, rectal
1.7
6.8
199
1448
R10.4
ICD-10 Finland
Other and unspecified abdominal pain
1.8
6.8
163
1123
K52.9
ICD-10 Finland
Noninfective gastroenteritis and colitis, unspecified
3.6
6.7
22
64
H10.3
ICD-10 Finland
Acute conjunctivitis, unspecified
2.5
6.6
43
185
Z2446
NOMESCO Finland
Social worker
2.6
6.3
36
145
0980A
ICD-9 Finland
Gonococcal infections, Acute, of lower genito-urinary tract
+∞
6.3
6
*
R03.0
ICD-10 Finland
Elevated blood-pressure reading, without diagnosis of hypertension
2.8
6.2
30
111
LabWAS
↥OMOP Concept
People with measurements
Mean N measurements
Mean measured value
(ID) Name
N Cases
N Controls
OR
-log10(p)
cases
controls
cases
controls
unit
-log10(p)
N cases
N controls
118
721
1.89
7.39
3.4
2.5
0.48
0.41
e6/l
0.11
85
534
89
517
1.92
6.41
2.2
2.0
—
—
—
0
0
59
295
2.17
6.40
2.3
1.8
—
—
—
0
0
26
89
3.05
6.12
1.5
1.1
—
—
—
0
0
141
972
1.69
5.64
4.4
2.7
—
—
—
0
0
49
242
2.16
5.48
2.1
1.7
—
—
—
0
0
126
863
1.66
5.08
2.0
2.0
126.52
139.57
u/l
0.34
120
825
71
412
1.88
5.08
2.6
2.3
1.30
1.04
e6/l
0.22
29
221
207
1615
1.57
4.80
7.5
5.4
9.38
9.46
umol/l
0.06
201
1548
49
257
2.03
4.69
10.7
6.8
104.10
104.49
mmol/l
0.29
49
257
77
474
1.77
4.53
2.0
1.9
—
—
—
0
0
65
381
1.84
4.49
2.8
2.4
1.71
4.07
e6/l
1.94
24
193
201
1590
1.52
4.18
5.4
4.1
0.00
0.00
estimate
0.50
40
285
200
1587
1.51
4.06
3.9
3.0
0.00
0.00
estimate
0.50
40
297
81
521
1.69
4.06
2.1
2.7
741.59
481.45
ng/l
0.33
68
430
202
1608
1.51
4.03
3.8
3.0
0.00
0.02
estimate
0.80
38
276
48
275
1.84
3.57
2.4
2.3
31.72
35.45
u/l
0.36
43
231
6
6
10.12
3.50
1.0
1.2
—
—
—
0
0
14
48
2.98
3.33
2.0
2.0
4.68
5.05
kpa
2.03
14
48
371
3442
1.84
3.24
14.2
10.2
139.59
139.76
mmol/l
0.80
363
3354
287
2515
1.47
3.17
9.5
6.6
77.25
74.88
u/l
0.53
273
2389
9
20
4.58
3.13
2.3
1.4
—
—
—
0
0
371
3455
1.79
3.01
14.3
10.3
3.92
3.92
mmol/l
0.12
361
3362
201
1666
1.41
2.92
5.8
3.7
6.51
6.38
mmol/l
0.19
191
1561
7
13
5.46
2.88
1.4
1.3
—
—
—
0
0
42
248
1.77
2.86
2.7
2.7
—
—
—
0
0
15
59
2.60
2.82
1.3
1.1
—
—
—
0
0
31
168
1.91
2.76
2.0
1.7
685.75
2612.24
u/l
—
8
54
316
2854
1.47
2.72
4.7
4.3
14.47
14.26
pmol/l
0.82
300
2687
26
133
2.02
2.72
7.6
7.3
25.02
25.08
mmol/l
0.03
26
133
31
169
1.90
2.71
13.9
7.7
7.47
7.65
mmol/l
0.06
31
164
71
490
1.54
2.66
2.3
1.6
1.46
1.35
%
0.78
66
445
353
3274
1.57
2.55
12.4
8.9
90.08
88.94
ml/min/173m2
0.54
299
2691
173
1425
1.37
2.50
2.3
2.3
76.48
76.20
nmol/l
0.04
162
1315
107
814
1.43
2.47
3.9
3.2
0.00
0.00
estimate
0.50
38
284
104
788
1.43
2.45
2.0
1.7
1.54
0.75
mg/l
1.73
72
603
93
693
1.44
2.39
2.5
2.0
—
—
—
0
0
21
105
2.05
2.35
3.0
1.7
—
—
—
0
0
150
1221
1.36
2.29
7.8
4.8
1.22
1.22
mmol/l
0.19
143
1113
79
576
1.46
2.27
1.6
1.6
439.10
23930397.25
pmol/l
0.78
72
514
64
447
1.51
2.27
1.3
1.4
32.40
32.97
iu/l
0.04
52
395
60
415
1.52
2.23
1.8
1.6
1300.25
1142.53
nmol/l
0.77
51
320
369
3482
1.61
2.18
14.7
10.3
18.86
18.68
mg/l
0.04
297
2652
351
3277
1.50
2.18
5.3
4.9
1.68
2.12
mu/l
0.67
333
3107
52
352
1.55
2.13
3.3
2.1
29.95
29.71
s
0.08
52
343
53
361
1.54
2.12
7.1
2.1
5.56
4.94
umol/l
0.21
42
305
133
1075
1.35
2.10
1.9
1.8
111.45
99.69
pmol/l
0.87
67
578
145
1193
1.33
2.02
6.6
4.1
35.78
36.87
g/l
1.45
138
1130
173
1463
1.32
1.98
2.8
2.3
—
—
—
0
0
25
142
1.81
1.98
1.5
1.7
—
—
—
0
0
78
585
1.41
1.93
1.5
1.4
17.92
21.00
nmol/l
1.63
73
514
5
14
3.60
1.62
1.0
1.4
—
—
—
0
0
5
14
3.60
1.62
1.0
1.4
—
—
—
0
0
191
1669
1.27
1.62
2.8
2.7
96.66
78.01
ug/l
1.20
184
1576
124
1026
1.30
1.62
3.3
2.6
26.45
19.60
ng/l
0.48
66
485
277
2535
1.29
1.59
4.4
3.8
10.38
9.87
mm/h
0.28
256
2384
384
3698
1.63
1.58
11.7
8.9
25.57
25.39
u/l
0.09
374
3611
140
1183
1.28
1.54
5.5
3.0
35.58
29.45
u/l
0.91
132
1136
8
33
2.45
1.54
1.0
1.2
—
—
—
0
0
160
1375
1.27
1.54
8.6
5.7
1.22
1.22
mmol/l
0.46
138
1161
324
3039
1.32
1.47
4.8
4.4
38.12
38.29
mmol/mol
0.15
307
2899
6
22
2.75
1.44
4.7
1.1
—
—
—
0
0
12
60
2.03
1.39
1.1
1.2
3.00
1.87
u/ml
—
5
16
22
135
1.67
1.39
1.7
1.5
—
—
—
0
0
35
243
1.48
1.33
2.2
2.0
66.45
78.95
ml/min/173m2
0.85
11
93
23
352
0.63
1.33
1.3
1.2
295.80
157.83
iu/ml
—
6
162
6
24
2.52
1.31
2.2
1.2
—
—
—
0
0
8
34
2.38
1.30
1.0
1.2
—
—
—
0
0
87
709
1.29
1.26
4.0
3.4
11.07
6.48
mg/mmol
0.22
55
427
345
3284
1.32
1.26
4.1
3.7
5.78
5.69
mmol/l
0.56
323
3111
27
180
1.54
1.24
1.6
1.6
—
—
—
0
0
22
140
1.60
1.23
1.6
1.5
—
—
—
0
0
64
503
1.32
1.21
2.8
3.0
43.00
287.48
ng/l
0.92
42
294
13
71
1.86
1.20
1.9
1.5
—
—
—
0
0
12
64
1.90
1.19
1.0
1.1
—
—
—
0
0
217
1971
1.22
1.17
10.7
9.2
4.06
3.89
e9/l
0.46
194
1752
33
234
1.45
1.15
2.2
1.7
—
—
—
0
0
18
111
1.65
1.14
19.3
10.0
92.86
93.22
%
0.10
18
111
12
66
1.84
1.10
1.8
1.6
—
—
—
0
0
7
33
2.14
1.06
1.0
1.2
—
—
—
0
0
7
33
2.14
1.06
1.0
1.2
—
—
—
0
0
130
1133
1.22
1.04
7.8
8.0
1.04
1.08
inr
0.75
60
350
13
75
1.76
1.04
2.2
1.4
—
—
—
0
0
7
34
2.08
1.03
1.0
1.2
—
—
—
0
0
7
34
2.08
1.03
1.0
1.2
—
—
—
0
0
7
34
2.08
1.03
1.0
1.2
—
—
—
0
0
145
1281
1.20
1.01
3.8
2.9
—
—
—
0
0
101
861
1.23
1.00
1.7
1.5
—
—
—
0
0
0
30
0.00
0.97
0.0
1.0
—
—
—
0
0
0
31
0.00
0.96
0.0
1.4
—
—
—
0
0
0
31
0.00
0.96
0.0
1.4
—
—
—
0
0
47
369
1.31
0.92
2.4
1.8
—
—
—
0
0
8
43
1.88
0.87
2.0
2.3
—
—
—
0
0
8
43
1.88
0.87
1.3
1.7
—
—
—
0
0
29
213
1.39
0.87
4.1
3.5
84.83
71.92
ng/l
0.20
24
192
8
44
1.83
0.86
1.5
1.1
—
—
—
0
0
358
3464
1.27
0.84
4.0
3.9
4.93
4.95
mmol/l
0.19
347
3326
8
46
1.75
0.83
1.5
1.2
—
—
—
0
0
8
46
1.75
0.83
1.4
1.5
37.75
41.30
nmol/l
—
8
46
8
46
1.75
0.83
1.5
1.2
—
—
—
0
0
16
107
1.52
0.77
1.4
1.3
1.46
19.11
u/ml
—
5
27
12
75
1.62
0.75
1.4
1.4
—
—
—
0
0
12
75
1.62
0.75
1.4
1.4
—
—
—
0
0
12
75
1.62
0.75
1.4
1.4
—
—
—
0
0
12
75
1.62
0.75
1.4
1.4
—
—
—
0
0
356
3452
1.24
0.74
3.9
3.8
1.52
1.54
mmol/l
0.48
343
3297
5
25
2.01
0.73
1.0
1.0
—
—
—
0
0
31
239
1.32
0.71
2.2
1.7
—
—
—
0
0
268
2541
1.16
0.71
4.2
2.9
54.75
38.69
u/l
0.80
253
2447
5
27
1.86
0.68
2.6
1.4
67.60
66.59
umol/l
—
5
27
21
154
1.38
0.66
2.2
2.3
2.69
4.79
ug/l
1.09
21
136
344
3337
1.19
0.63
3.6
3.5
1.34
1.26
mmol/l
1.08
332
3182
8
50
1.61
0.61
1.6
1.5
—
—
—
0
0
100
892
1.16
0.61
1.3
1.3
1.21
1.66
u/ml
0.29
37
257
179
1663
1.14
0.61
7.6
5.6
29.67
29.52
%
0.07
174
1580
76
663
1.18
0.61
2.6
2.0
3.44
2.81
mg/l
1.15
68
556
8
55
1.46
0.56
1.6
2.6
—
—
—
0
0
40
479
0.82
0.56
1.8
1.8
—
—
—
0
0
176
1643
1.13
0.55
7.5
5.4
55.69
56.41
%
0.37
170
1557
6
38
1.59
0.54
2.2
1.6
6.45
5.25
u/ml
—
6
38
15
108
1.40
0.54
5.5
2.2
0.64
0.64
%
0.00
15
108
10
66
1.53
0.53
1.4
1.2
—
—
—
0
0
12
84
1.44
0.50
1.4
1.5
—
—
—
0
0
7
46
1.53
0.48
4.1
4.2
37.94
19.84
mg/l
—
7
37
7
46
1.53
0.48
4.1
4.2
32.53
30.56
mg/l
—
7
39
358
3503
1.18
0.48
4.4
4.1
2.95
2.98
mmol/l
0.29
342
3343
94
852
1.13
0.47
1.8
1.7
1.55
1.39
mmol/l
0.76
85
748
85
766
1.14
0.46
2.8
2.1
305.16
5234.01
umol/l
2.86
77
712
104
950
1.13
0.46
1.6
1.4
—
—
—
0
0
20
253
0.78
0.46
1.7
1.5
—
—
—
0
0
14
103
1.37
0.45
1.6
1.3
15.10
15.88
u/l
0.06
14
83
15
112
1.35
0.45
5.5
2.2
1.43
1.16
%
0.47
15
112
7
50
1.41
0.45
1.4
1.3
—
—
—
0
0
19
241
0.78
0.45
1.1
1.0
—
—
—
0
0
10
69
1.46
0.44
3.2
4.0
3.37
4.41
e9/l
—
10
69
31
258
1.22
0.43
1.1
1.2
—
33.18
—
0
14
10
70
1.44
0.42
3.2
4.6
50.00
57.57
%
—
10
70
8
58
1.39
0.41
1.5
1.6
—
—
—
0
0
8
59
1.36
0.41
1.0
1.3
—
—
—
0
0
5
34
1.48
0.40
3.2
1.6
0.87
1.03
g/l
—
5
34
291
2822
1.11
0.40
3.8
3.4
—
—
—
0
0
0
18
0.00
0.40
0.0
1.1
—
31.97
—
0
18
14
106
1.33
0.39
1.1
1.2
—
—
—
0
0
10
71
1.42
0.39
1.4
1.4
—
—
—
0
0
29
342
0.84
0.37
4.6
3.7
34.77
32.69
%
0.50
22
253
5
37
1.36
0.37
1.0
1.0
—
—
—
0
0
17
135
1.27
0.36
1.3
2.1
—
—
—
0
0
6
43
1.40
0.35
1.0
1.1
—
—
—
0
0
27
228
1.20
0.34
13.4
7.5
0.75
1.33
mmol/l
0.30
19
175
6
45
1.34
0.34
2.0
1.4
422.33
487.03
pmol/l
—
6
39
78
717
1.11
0.32
1.3
1.3
3.16
11.96
u/ml
2.20
38
317
7
52
1.35
0.31
3.9
2.3
24.36
24.16
mmol/l
—
7
52
14
173
0.80
0.29
3.6
1.8
—
—
—
0
0
8
66
1.22
0.27
1.6
1.3
—
—
—
0
0
78
728
1.09
0.25
1.3
1.3
17.11
25.76
iu/ml
1.04
27
267
5
38
1.32
0.23
1.2
1.2
—
—
—
0
0
11
88
1.26
0.22
1.5
1.2
—
—
—
0
0
5
40
1.25
0.22
1.6
1.4
—
—
—
0
0
5
41
1.22
0.22
1.6
1.3
—
—
—
0
0
13
107
1.22
0.22
1.1
1.2
—
—
—
0
0
5
42
1.19
0.21
1.8
1.3
—
—
—
0
0
5
42
1.19
0.21
1.8
1.3
—
—
—
0
0
5
42
1.19
0.21
1.6
1.3
—
—
—
0
0
5
42
1.19
0.21
1.6
1.3
—
—
—
0
0
0
11
0.00
0.21
0.0
1.3
—
—
—
0
0
0
10
0.00
0.21
0.0
1.0
—
99.20
—
0
10
0
12
0.00
0.21
0.0
1.2
—
—
—
0
0
11
89
1.24
0.21
1.5
2.0
—
—
—
0
0
0
13
0.00
0.21
0.0
2.2
—
2.43
—
0
6
0
14
0.00
0.20
0.0
1.4
—
—
—
0
0
6
49
1.23
0.20
1.0
1.1
—
—
—
0
0
6
49
1.23
0.20
1.3
1.4
—
—
—
0
0
24
213
1.13
0.19
1.5
1.4
—
—
—
0
0
7
58
1.21
0.18
1.0
1.2
—
—
—
0
0
5
68
0.73
0.17
1.0
1.1
—
—
—
0
0
52
488
1.08
0.15
2.6
2.6
2.45
2.43
mmol/l
1.15
45
439
16
141
1.14
0.14
5.6
3.5
-0.41
1.87
mmol/l
0.80
11
103
21
189
1.12
0.14
4.4
3.6
24.52
21.35
%
0.50
11
76
10
85
1.18
0.12
1.2
1.0
3.04
2.10
u/ml
—
5
47
17
152
1.12
0.12
1.3
1.4
152.67
232.85
miu/ml
—
9
78
23
247
0.93
0.09
1.3
1.4
—
—
—
0
0
12
107
1.13
0.08
2.5
1.9
—
—
—
0
0
10
113
0.88
0.08
1.1
1.1
—
—
—
0
0
16
146
1.10
0.08
6.6
3.5
4.95
5.11
kpa
0.44
16
141
11
98
1.13
0.07
1.6
2.9
33.09
51.20
%
1.24
11
98
392
3909
1.07
0.05
20.9
15.6
40.51
40.27
%
0.63
383
3742
34
351
0.97
0.03
5.2
4.5
—
—
—
0
0
28
290
0.96
0.03
2.0
2.3
68.48
34.95
u/ml
0.42
28
275
11
102
1.08
0.03
1.9
1.8
—
—
—
0
0
103
1040
0.99
0.02
3.4
3.3
2.36
2.35
mmol/l
0.24
94
955
14
133
1.05
0.01
1.3
1.4
—
—
—
0
0
12
126
0.95
0.00
1.3
1.7
0.20
0.24
g/l
1.43
12
120
13
131
0.99
0.00
1.3
1.6
1.08
1.21
g/l
1.20
13
123
18
185
0.97
0.00
1.4
1.8
6.08
2.86
mg/l
0.79
11
139
12
116
1.04
0.00
1.3
1.2
—
—
—
0
0
0
9
0.00
0.00
0.0
1.2
—
—
—
0
0
0
9
0.00
0.00
0.0
1.0
—
1.23
—
0
9
0
9
0.00
0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.7
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.3
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
1.0
—
—
—
0
0
0
6
0.00
-0.00
0.0
2.8
—
—
—
0
0
0
8
0.00
-0.00
0.0
1.1
—
—
—
0
0
9
98
0.92
-0.00
1.3
1.3
367.67
456.74
mg/l
—
9
92
5
50
1.00
-0.00
1.8
3.4
21.20
46.72
u/ml
—
5
50
0
6
0.00
-0.00
0.0
1.0
—
63.33
—
0
6
0
5
0.00
-0.00
0.0
1.0
—
—
—
0
0
Mortality – FinRegistry
↥This endpoint is excluded (different definition than used in FinnGen).
Relationships between endpoints
↥Index endpoint: AB1_CHLAMY_OTHER – Diseases caused by chlamydiae
GWS hits: -
This endpoint is excluded (different definition than used in FinnGen).