cirrhosis of liver: A disorder characterized by replacement of the liver parenchyma with fibrous tissue and regenerative nodules. It is usually caused by alcoholism, hepatitis B, and hepatitis C. Complications include the development of ascites, esophageal varices, bleeding, and hepatic encephalopathy.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
222 |
4. Check minimum number of eventsNone |
222 |
5. Include endpointsNone |
222 |
6. Filter based on genotype QC (FinnGen only) |
222 |
Control definitions (FinnGen only)
- Control exclude
- CIRRHOSIS_BROAD
Extra metadata
- First used in FinnGen datafreeze
- DF2
- Parent code in ICD-10
- K74
- Name in latin
- Fibrosis hepatis
Similar endpoints
↥List of similar endpoints to Fibrosis of liver based on the number of shared cases.
Similar with more cases:
- Fibrosis and cirrhosis of liver
- Cirrhosis, broad definition used in the article https://doi.org/10.1101/594523
- Diseases of liver
- Gastrointestinal diseases
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | |||
Whole population | 1501 | 735 | 747 |
Only index persons | 1232 | 625 | 607 |
Unadjusted period prevalence (%) | |||
Whole population | 0.02 | 0.02 | 0.02 |
Only index persons | 0.02 | 0.02 | 0.02 |
Median age at first event (years) | |||
Whole population | 59.22 | 59.75 | 58.57 |
Only index persons | 58.22 | 58.24 | 58.20 |
-FinnGen-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | 222 | 115 | 107 |
Unadjusted period prevalence (%) | 0.04 | 0.04 | 0.05 |
Median age at first event (years) | 57.16 | 55.12 | 59.34 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 195
- Matched controls
- 1949
LabWAS
↥Mortality – FinRegistry
↥Association
Association between endpoint FIBROLIV and mortality.
Females
Parameter | HR [95% CI] | p-value |
---|---|---|
FIBROLIV | 3.993 [3.15, 5.06] | < 0.001 |
Birth year | 1.0 [0.99, 1.01] | 0.94 |
During the follow-up period (1.1.1998 — 31.12.2019), 199 out of 599 females with FIBROLIV died.
Males
Parameter | HR [95% CI] | p-value |
---|---|---|
FIBROLIV | 5.7 [4.11, 7.91] | < 0.001 |
Birth year | 0.983 [0.97, 0.99] | < 0.001 |
During the follow-up period (1.1.1998 — 31.12.2019), 263 out of 545 males with FIBROLIV died.
Mortality risk
Mortality risk for people of age
years, who have FIBROLIV.N-year risk | Females | Males |
---|---|---|
1 | 0.386% | 1.014% |
5 | 2.546% | 5.439% |
10 | 6.983% | 14.34% |
15 | 12.573% | 25.688% |
20 | 21.768% | 40.077% |
Relationships between endpoints
↥Index endpoint: FIBROLIV – Fibrosis of liver
GWS hits: -