No definition available.
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters:
2 out of 7 registries used, show all original rules. |
192 |
4. Check minimum number of eventsNone |
192 |
5. Include endpointsNone |
192 |
6. Filter based on genotype QC (FinnGen only) |
192 |
Control definitions (FinnGen only)
- Control exclude
- E4_NUTRIDEF
Extra metadata
- Level in the ICD hierarchy
- 4
- First used in FinnGen datafreeze
- DF2
- Parent code in ICD-10
- E50-E64
- Name in latin
- Deficientia thiamini
Similar endpoints
↥List of similar endpoints to Thiamine deficiency based on the number of shared cases.
Similar with more cases:
- Vitamin deficiency
- Vitamin deficiency, wide
- Other nutritional deficiencies
- Endocrine, nutritional and metabolic diseases
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | |||
Whole population | 2748 | 938 | 1792 |
Only index persons | 2295 | 816 | 1479 |
Unadjusted period prevalence (%) | |||
Whole population | 0.04 | 0.03 | 0.05 |
Only index persons | 0.05 | 0.03 | 0.06 |
Median age at first event (years) | |||
Whole population | 59.15 | 58.66 | 59.36 |
Only index persons | 59.28 | 58.60 | 59.66 |
-FinnGen-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | 192 | 66 | 126 |
Unadjusted period prevalence (%) | 0.04 | 0.02 | 0.06 |
Median age at first event (years) | 59.64 | 56.56 | 61.26 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 175
- Matched controls
- 1751
LabWAS
↥Mortality – FinRegistry
↥Association
Association between endpoint E4_THIA_DEF and mortality.
Females
Parameter | HR [95% CI] | p-value |
---|---|---|
E4_THIA_DEF | 4.252 [3.12, 5.8] | < 0.001 |
Birth year | 0.994 [0.99, 1.0] | 0.177 |
During the follow-up period (1.1.1998 — 31.12.2019), 230 out of 671 females with E4_THIA_DEF died.
Males
Parameter | HR [95% CI] | p-value |
---|---|---|
E4_THIA_DEF | 4.98 [4.14, 5.99] | < 0.001 |
Birth year | 0.982 [0.97, 0.99] | < 0.001 |
During the follow-up period (1.1.1998 — 31.12.2019), 604 out of 1344 males with E4_THIA_DEF died.
Mortality risk
Mortality risk for people of age
years, who have E4_THIA_DEF.N-year risk | Females | Males |
---|---|---|
1 | 0.316% | 0.751% |
5 | 2.24% | 4.701% |
10 | 5.913% | 11.842% |
15 | 11.245% | 21.364% |
20 | 18.957% | 33.304% |
Relationships between endpoints
↥Index endpoint: E4_THIA_DEF – Thiamine deficiency
GWS hits: -