No definition available.
Other bacterial agents as the cause of diseases classified to other chapters
AB1_OTHER_BACT_INOTHER
Endpoint definition
↥
Endpoint definition steps |
FinnGen |
---|---|
Phenotype data |
520210 |
1. Apply sex-specific ruleNone |
520210 |
2. Check conditionsNone |
520210 |
3. Check pre-conditions, main-only, mode, registry filtersRegistry filters: 2 out of 7 registries used, show all original rules. |
354 |
4. Check minimum number of eventsNone |
354 |
5. Include endpointsNone |
354 |
6. Filter based on genotype QC (FinnGen only) |
354 |
Control definitions (FinnGen only)
- Control exclude
- AB1_BACT_BIR_OTHER_INF_AGENTS
Extra metadata
- Level in the ICD hierarchy
- 3
- First used in FinnGen datafreeze
- DF5
Similar endpoints
↥List of similar endpoints to Other bacterial agents as the cause of diseases classified to other chapters based on the number of shared cases.
Similar with more cases:
- Bacterial, viral and other infectious agents
- Certain infectious and parasitic diseases
- Any event in hilmo or specialist outpatient
Similar with less cases:
None
Case counts by codes
↥Summary Statistics
↥-FinRegistry-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | |||
Whole population | 3169 | 1962 | 1175 |
Only index persons | 2334 | 1415 | 919 |
Unadjusted period prevalence (%) | |||
Whole population | 0.05 | 0.06 | 0.03 |
Only index persons | 0.05 | 0.05 | 0.04 |
Median age at first event (years) | |||
Whole population | 62.07 | 63.04 | 60.18 |
Only index persons | 53.67 | 53.02 | 54.69 |
-FinnGen-
Key figures
All | Female | Male | |
---|---|---|---|
Number of individuals | 354 | 217 | 137 |
Unadjusted period prevalence (%) | 0.07 | 0.07 | 0.06 |
Median age at first event (years) | 57.16 | 53.73 | 62.59 |
-FinRegistry-
Age distribution of first events
-FinnGen-
Age distribution of first events
-FinRegistry-
Year distribution of first events
-FinnGen-
Year distribution of first events
-FinRegistry-
Cumulative Incidence Function
-FinnGen-
Cumulative Incidence Function
CodeWAS (R11)
↥CodeWAS is a tool for exploring the associations between an endpoint and all of the medical codes and drug codes.
This is a new tool, please reach out using the contact form for feedback and improvement ideas.
First, a cohort is built by matching controls to the endpoint cases using year of birth and sex. Then, a Fisher test is done for all the medical codes and drug codes between the cases and controls of this cohort. Codes are reported in the table below if they have −log10(p-value) ≥ 6.
Matched cohort
- Matched cases
- 319
- Matched controls
- 3189
LabWAS
↥Mortality – FinRegistry
↥Association
Association between endpoint AB1_OTHER_BACT_INOTHER and mortality.
Females
Parameter | HR [95% CI] | p-value |
---|---|---|
AB1_OTHER_BACT_INOTHER | 2.026 [1.66, 2.48] | < 0.001 |
Birth year | 0.995 [0.99, 1.0] | 0.22 |
During the follow-up period (1.1.1998 — 31.12.2019), 562 out of 1325 females with AB1_OTHER_BACT_INOTHER died.
Males
Parameter | HR [95% CI] | p-value |
---|---|---|
AB1_OTHER_BACT_INOTHER | 2.755 [2.11, 3.59] | < 0.001 |
Birth year | 0.985 [0.98, 0.99] | 0.002 |
During the follow-up period (1.1.1998 — 31.12.2019), 352 out of 852 males with AB1_OTHER_BACT_INOTHER died.
Mortality risk
Mortality risk for people of age
years, who have AB1_OTHER_BACT_INOTHER.N-year risk | Females | Males |
---|---|---|
1 | 0.208% | 0.509% |
5 | 1.246% | 2.961% |
10 | 3.141% | 7.155% |
15 | 5.804% | 13.554% |
20 | 10.293% | 21.955% |
Relationships between endpoints
↥Index endpoint: AB1_OTHER_BACT_INOTHER – Other bacterial agents as the cause of diseases classified to other chapters
GWS hits: -